RNA–Protein interactions for RNA: ENST00000543579.5

TCF12-206, Transcript of transcription factor 12, humanhuman

TSL 1 (best) BASIC

Gene TCF12, Length 1,809 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF12-206ENST00000543579 NISCHQ9Y2I1 1504 aa17.11■□□□□ 0.33
TCF12-206ENST00000543579 AEBP2Q6ZN18 517 aaPredicted RBP15.72■□□□□ 0.11
TCF12-206ENST00000543579 CHIC1Q5VXU3 224 aa14.94□□□□□ -0.02
TCF12-206ENST00000543579 CCDC180Q9P1Z9 1646 aa14.72□□□□□ -0.05
TCF12-206ENST00000543579 ZCCHC6Q5VYS8 1495 aaKnown RBP14.5□□□□□ -0.09
TCF12-206ENST00000543579 SHROOM4Q9ULL8 1493 aa14.28□□□□□ -0.12
TCF12-206ENST00000543579 DCAF1Q9Y4B6 1507 aa14.14□□□□□ -0.15
TCF12-206ENST00000543579 SUPT5HO00267 1087 aaKnown RBP13.87□□□□□ -0.19
TCF12-206ENST00000543579 DCAF8L2P0C7V8 631 aa13.86□□□□□ -0.19
TCF12-206ENST00000543579 MYO15BQ96JP2 1530 aa13.78□□□□□ -0.2
TCF12-206ENST00000543579 ABCC9O60706 1549 aa13.69□□□□□ -0.22
TCF12-206ENST00000543579 SCRIBQ14160 1630 aa13.64□□□□□ -0.23
TCF12-206ENST00000543579 SENP3Q9H4L4 574 aaPredicted RBP13.62□□□□□ -0.23
TCF12-206ENST00000543579 NACADO15069 1562 aa13.56□□□□□ -0.24
TCF12-206ENST00000543579 RSF1Q96T23 1441 aaPredicted RBP13.46□□□□□ -0.26
TCF12-206ENST00000543579 PHF23Q9BUL5 403 aaPredicted RBP13.35□□□□□ -0.27
TCF12-206ENST00000543579 RB1CC1Q8TDY2 1594 aa13.34□□□□□ -0.27
TCF12-206ENST00000543579 CECR2Q9BXF3 1484 aa13.31□□□□□ -0.28
TCF12-206ENST00000543579 MROH2BQ7Z745 1585 aa13.28□□□□□ -0.28
TCF12-206ENST00000543579 UNC13AQ9UPW8 1703 aa13.22□□□□□ -0.29
TCF12-206ENST00000543579 WIZO95785 1651 aa13.2□□□□□ -0.3
TCF12-206ENST00000543579 BAZ1AQ9NRL2 1556 aaPredicted RBP13.18□□□□□ -0.3
TCF12-206ENST00000543579 EIF4G1Q04637 1599 aaKnown RBP13.12□□□□□ -0.31
TCF12-206ENST00000543579 SMARCA4P51532 1647 aa13.09□□□□□ -0.31
TCF12-206ENST00000543579 LOC105371045A0A1W2PR82 267 aa13.05□□□□□ -0.32
TCF12-206ENST00000543579 BICRAQ9NZM4 1560 aa13.05□□□□□ -0.32
TCF12-206ENST00000543579 TOP2AP11388 1531 aaKnown RBP13.04□□□□□ -0.32
TCF12-206ENST00000543579 TRIM41Q8WV44 630 aa12.97□□□□□ -0.33
TCF12-206ENST00000543579 SMARCA2P51531 1590 aa12.96□□□□□ -0.33
TCF12-206ENST00000543579 PEG3Q9GZU2 1588 aa12.91□□□□□ -0.34
TCF12-206ENST00000543579 CCDC88BA6NC98 1476 aa12.91□□□□□ -0.34
TCF12-206ENST00000543579 HRCP23327 699 aa12.89□□□□□ -0.35
TCF12-206ENST00000543579 PCGF6Q9BYE7 350 aa12.88□□□□□ -0.35
TCF12-206ENST00000543579 ABCC8Q09428 1581 aa12.83□□□□□ -0.36
TCF12-206ENST00000543579 PABPN1Q86U42 306 aaKnown RBP eCLIP12.82□□□□□ -0.36
TCF12-206ENST00000543579 FAM9AQ8IZU1 332 aaPredicted RBP12.8□□□□□ -0.36
TCF12-206ENST00000543579 ATAD2BQ9ULI0 1458 aa12.74□□□□□ -0.37
TCF12-206ENST00000543579 TRIM26Q12899 539 aaPredicted RBP12.73□□□□□ -0.37
TCF12-206ENST00000543579 BAZ1BQ9UIG0 1483 aaKnown RBP12.67□□□□□ -0.38
TCF12-206ENST00000543579 SOGA1O94964 1423 aa12.65□□□□□ -0.39
TCF12-206ENST00000543579 SYNJ1O43426 1573 aa12.63□□□□□ -0.39
TCF12-206ENST00000543579 EHMT2Q96KQ7 1210 aa12.62□□□□□ -0.39
TCF12-206ENST00000543579 WRNQ14191 1432 aaPredicted RBP eCLIP12.61□□□□□ -0.39
TCF12-206ENST00000543579 EEA1Q15075 1411 aa12.61□□□□□ -0.39
TCF12-206ENST00000543579 RUSC2Q8N2Y8 1516 aa12.6□□□□□ -0.39
TCF12-206ENST00000543579 FOXD1Q16676 465 aa12.6□□□□□ -0.39
TCF12-206ENST00000543579 PPARGC1BQ86YN6 1023 aaKnown RBP12.58□□□□□ -0.4
TCF12-206ENST00000543579 HMGXB3Q12766 1538 aa12.58□□□□□ -0.4
TCF12-206ENST00000543579 CEP162Q5TB80 1403 aa12.55□□□□□ -0.4
TCF12-206ENST00000543579 TNIKQ9UKE5 1360 aa12.54□□□□□ -0.4
TCF12-206ENST00000543579 NCAPD3P42695 1498 aa12.52□□□□□ -0.4
TCF12-206ENST00000543579 KIF21BO75037 1637 aa12.51□□□□□ -0.41
TCF12-206ENST00000543579 GOLGA3Q08378 1498 aa12.51□□□□□ -0.41
TCF12-206ENST00000543579 TOP2BQ02880 1626 aa12.5□□□□□ -0.41
TCF12-206ENST00000543579 BIVM-ERCC5R4GMW8 1640 aa12.5□□□□□ -0.41
TCF12-206ENST00000543579 CSRNP3Q8WYN3 585 aa12.49□□□□□ -0.41
TCF12-206ENST00000543579 CEP164Q9UPV0 1460 aa12.45□□□□□ -0.42
TCF12-206ENST00000543579 PRDM2Q13029 1718 aa12.4□□□□□ -0.42
TCF12-206ENST00000543579 CUX1P39880 1505 aa12.39□□□□□ -0.43
TCF12-206ENST00000543579 CFTRP13569 1480 aa12.39□□□□□ -0.43
TCF12-206ENST00000543579 ZEB1P37275 1124 aaPredicted RBP12.38□□□□□ -0.43
TCF12-206ENST00000543579 RAPGEF2Q9Y4G8 1499 aa12.37□□□□□ -0.43
TCF12-206ENST00000543579 UBTFP17480 764 aaKnown RBP12.34□□□□□ -0.43
TCF12-206ENST00000543579 ERICH3Q5RHP9 1530 aa12.33□□□□□ -0.44
TCF12-206ENST00000543579 PLPPR3Q6T4P5 718 aa12.32□□□□□ -0.44
TCF12-206ENST00000543579 CLIP1P30622 1438 aa12.32□□□□□ -0.44
TCF12-206ENST00000543579 PRXQ9BXM0 1461 aa12.32□□□□□ -0.44
TCF12-206ENST00000543579 VPS8Q8N3P4 1428 aa12.29□□□□□ -0.44
TCF12-206ENST00000543579 CC2D2AQ9P2K1 1620 aa12.27□□□□□ -0.45
TCF12-206ENST00000543579 KIF27Q86VH2 1401 aa12.22□□□□□ -0.45
TCF12-206ENST00000543579 CADPSQ9ULU8 1353 aa12.22□□□□□ -0.45
TCF12-206ENST00000543579 ARAP1Q96P48 1450 aa12.22□□□□□ -0.45
TCF12-206ENST00000543579 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.21□□□□□ -0.45
TCF12-206ENST00000543579 TTBK1Q5TCY1 1321 aaPredicted RBP12.21□□□□□ -0.46
TCF12-206ENST00000543579 FGD5Q6ZNL6 1462 aa12.16□□□□□ -0.46
TCF12-206ENST00000543579 CCER1Q8TC90 406 aaPredicted RBP12.14□□□□□ -0.47
TCF12-206ENST00000543579 CUX2O14529 1486 aa12.13□□□□□ -0.47
TCF12-206ENST00000543579 FANCD2Q9BXW9 1451 aa12.11□□□□□ -0.47
TCF12-206ENST00000543579 ARHGAP35Q9NRY4 1499 aa12.11□□□□□ -0.47
TCF12-206ENST00000543579 DNMBPQ6XZF7 1577 aa12.1□□□□□ -0.47
TCF12-206ENST00000543579 IGF1RP08069 1367 aa12.1□□□□□ -0.47
TCF12-206ENST00000543579 NESP48681 1621 aa12.06□□□□□ -0.48
TCF12-206ENST00000543579 TOPBP1Q92547 1522 aa12.06□□□□□ -0.48
TCF12-206ENST00000543579 RANGAP1P46060 587 aaPredicted RBP12.05□□□□□ -0.48
TCF12-206ENST00000543579 ABCA10Q8WWZ4 1543 aa12.04□□□□□ -0.48
TCF12-206ENST00000543579 WDR97A6NE52 1622 aa12.04□□□□□ -0.48
TCF12-206ENST00000543579 POLA1P09884 1462 aaPredicted RBP12.04□□□□□ -0.48
TCF12-206ENST00000543579 LAMC3Q9Y6N6 1575 aa12.03□□□□□ -0.48
TCF12-206ENST00000543579 CARMIL1Q5VZK9 1371 aa12.02□□□□□ -0.49
TCF12-206ENST00000543579 MSH5O43196 834 aa12.02□□□□□ -0.49
TCF12-206ENST00000543579 RRBP1Q9P2E9 1410 aaKnown RBP12.01□□□□□ -0.49
TCF12-206ENST00000543579 RAD54L2Q9Y4B4 1467 aa12.01□□□□□ -0.49
TCF12-206ENST00000543579 APLP2Q06481 763 aa12□□□□□ -0.49
TCF12-206ENST00000543579 KANK4Q5T7N3 995 aaPredicted RBP12□□□□□ -0.49
TCF12-206ENST00000543579 URB2Q14146 1524 aaKnown RBP11.99□□□□□ -0.49
TCF12-206ENST00000543579 HNRNPUL2Q1KMD3 747 aaKnown RBP11.99□□□□□ -0.49
TCF12-206ENST00000543579 CUL7Q14999 1698 aa11.99□□□□□ -0.49
TCF12-206ENST00000543579 MAP3K1Q13233 1512 aa11.99□□□□□ -0.49
TCF12-206ENST00000543579 TIAM1Q13009 1591 aa11.98□□□□□ -0.49
TCF12-206ENST00000543579 CFAP43Q8NDM7 1665 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms