RNA–Protein interactions for RNA: ENST00000539455.5

CELF1-220, Transcript of CUGBP Elav-like family member 1, humanhuman

TSL 5

Gene CELF1, Length 800 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CELF1-220ENST00000539455 AEBP2Q6ZN18 517 aaPredicted RBP13.85□□□□□ -0.19
CELF1-220ENST00000539455 CHIC1Q5VXU3 224 aa13.68□□□□□ -0.22
CELF1-220ENST00000539455 NISCHQ9Y2I1 1504 aa13.48□□□□□ -0.25
CELF1-220ENST00000539455 DNAJC5BQ9UF47 199 aa13.39□□□□□ -0.27
CELF1-220ENST00000539455 ABCC9O60706 1549 aa13.33□□□□□ -0.28
CELF1-220ENST00000539455 DNAJC5Q9H3Z4 198 aa12.82□□□□□ -0.36
CELF1-220ENST00000539455 CCDC180Q9P1Z9 1646 aa12.37□□□□□ -0.43
CELF1-220ENST00000539455 PABPN1Q86U42 306 aaKnown RBP eCLIP12.32□□□□□ -0.44
CELF1-220ENST00000539455 RB1CC1Q8TDY2 1594 aa12.24□□□□□ -0.45
CELF1-220ENST00000539455 CECR2Q9BXF3 1484 aa12.08□□□□□ -0.47
CELF1-220ENST00000539455 PHF23Q9BUL5 403 aaPredicted RBP12.01□□□□□ -0.49
CELF1-220ENST00000539455 TRIM41Q8WV44 630 aa12□□□□□ -0.49
CELF1-220ENST00000539455 NACADO15069 1562 aa11.95□□□□□ -0.5
CELF1-220ENST00000539455 BICRAQ9NZM4 1560 aa11.95□□□□□ -0.5
CELF1-220ENST00000539455 CC2D2AQ9P2K1 1620 aa11.94□□□□□ -0.5
CELF1-220ENST00000539455 UNC13AQ9UPW8 1703 aa11.9□□□□□ -0.5
CELF1-220ENST00000539455 CUX2O14529 1486 aa11.81□□□□□ -0.52
CELF1-220ENST00000539455 SENP3Q9H4L4 574 aaPredicted RBP11.79□□□□□ -0.52
CELF1-220ENST00000539455 DCAF8L2P0C7V8 631 aa11.76□□□□□ -0.53
CELF1-220ENST00000539455 EIF4G1Q04637 1599 aaKnown RBP11.71□□□□□ -0.53
CELF1-220ENST00000539455 SHROOM4Q9ULL8 1493 aa11.69□□□□□ -0.54
CELF1-220ENST00000539455 ERCC6Q03468 1493 aa11.54□□□□□ -0.56
CELF1-220ENST00000539455 MYO15BQ96JP2 1530 aa11.52□□□□□ -0.57
CELF1-220ENST00000539455 SCRIBQ14160 1630 aa11.33□□□□□ -0.6
CELF1-220ENST00000539455 ILDR1Q86SU0 546 aaPredicted RBP11.22□□□□□ -0.61
CELF1-220ENST00000539455 THOC2Q8NI27 1593 aaKnown RBP11.22□□□□□ -0.61
CELF1-220ENST00000539455 NESP48681 1621 aa11.21□□□□□ -0.61
CELF1-220ENST00000539455 PLPPR3Q6T4P5 718 aa11.18□□□□□ -0.62
CELF1-220ENST00000539455 TRHP20396 242 aaPredicted RBP11.13□□□□□ -0.63
CELF1-220ENST00000539455 OSCARQ8IYS5 282 aa11.13□□□□□ -0.63
CELF1-220ENST00000539455 SMARCA2P51531 1590 aa11.09□□□□□ -0.63
CELF1-220ENST00000539455 NCAPD3P42695 1498 aa11.09□□□□□ -0.63
CELF1-220ENST00000539455 BAZ1AQ9NRL2 1556 aaPredicted RBP11.07□□□□□ -0.64
CELF1-220ENST00000539455 RIMBP3CA6NJZ7 1639 aa11.07□□□□□ -0.64
CELF1-220ENST00000539455 RIMBP3BA6NNM3 1639 aa11.07□□□□□ -0.64
CELF1-220ENST00000539455 RIMBP3Q9UFD9 1639 aa11.07□□□□□ -0.64
CELF1-220ENST00000539455 DCAF1Q9Y4B6 1507 aa11.06□□□□□ -0.64
CELF1-220ENST00000539455 ZCCHC6Q5VYS8 1495 aaKnown RBP11□□□□□ -0.65
CELF1-220ENST00000539455 ARHGEF11O15085 1522 aa10.96□□□□□ -0.65
CELF1-220ENST00000539455 CYB5RLQ6IPT4 315 aa10.96□□□□□ -0.65
CELF1-220ENST00000539455 KIF21AQ7Z4S6 1674 aa10.95□□□□□ -0.66
CELF1-220ENST00000539455 ATAD2BQ9ULI0 1458 aa10.94□□□□□ -0.66
CELF1-220ENST00000539455 PDS5BQ9NTI5 1447 aa10.92□□□□□ -0.66
CELF1-220ENST00000539455 LAMC3Q9Y6N6 1575 aa10.92□□□□□ -0.66
CELF1-220ENST00000539455 HMGXB3Q12766 1538 aa10.9□□□□□ -0.66
CELF1-220ENST00000539455 MRC2Q9UBG0 1479 aa10.89□□□□□ -0.67
CELF1-220ENST00000539455 FOXD1Q16676 465 aa10.88□□□□□ -0.67
CELF1-220ENST00000539455 WDR62O43379 1518 aa10.88□□□□□ -0.67
CELF1-220ENST00000539455 ARAP1Q96P48 1450 aa10.82□□□□□ -0.68
CELF1-220ENST00000539455 BAZ1BQ9UIG0 1483 aaKnown RBP10.76□□□□□ -0.69
CELF1-220ENST00000539455 CADPSQ9ULU8 1353 aa10.72□□□□□ -0.69
CELF1-220ENST00000539455 CEP164Q9UPV0 1460 aa10.67□□□□□ -0.7
CELF1-220ENST00000539455 SMARCA4P51532 1647 aa10.66□□□□□ -0.7
CELF1-220ENST00000539455 RSF1Q96T23 1441 aaPredicted RBP10.63□□□□□ -0.71
CELF1-220ENST00000539455 KDM4FA0A1W2PPD8 638 aa10.6□□□□□ -0.71
CELF1-220ENST00000539455 FANCD2Q9BXW9 1451 aa10.6□□□□□ -0.71
CELF1-220ENST00000539455 ZNF608Q9ULD9 1512 aaPredicted RBP10.59□□□□□ -0.71
CELF1-220ENST00000539455 URB2Q14146 1524 aaKnown RBP10.58□□□□□ -0.72
CELF1-220ENST00000539455 PEG3Q9GZU2 1588 aa10.57□□□□□ -0.72
CELF1-220ENST00000539455 ADRA2BP18089 450 aa10.54□□□□□ -0.72
CELF1-220ENST00000539455 PPP6R1Q9UPN7 881 aa10.54□□□□□ -0.72
CELF1-220ENST00000539455 LMTK3Q96Q04 1460 aa10.53□□□□□ -0.72
CELF1-220ENST00000539455 ILDR2Q71H61 639 aa10.5□□□□□ -0.73
CELF1-220ENST00000539455 IFT140Q96RY7 1462 aa10.49□□□□□ -0.73
CELF1-220ENST00000539455 FBXO41Q8TF61 875 aa10.49□□□□□ -0.73
CELF1-220ENST00000539455 CHD1O14646 1710 aa10.48□□□□□ -0.73
CELF1-220ENST00000539455 FBLN2P98095 1184 aa10.47□□□□□ -0.73
CELF1-220ENST00000539455 SOCS7O14512 581 aa10.46□□□□□ -0.73
CELF1-220ENST00000539455 ERCC6L2Q5T890 1561 aa10.43□□□□□ -0.74
CELF1-220ENST00000539455 EIF4G3O43432 1585 aaKnown RBP10.43□□□□□ -0.74
CELF1-220ENST00000539455 HECW2Q9P2P5 1572 aa10.41□□□□□ -0.74
CELF1-220ENST00000539455 CFTRP13569 1480 aa10.41□□□□□ -0.74
CELF1-220ENST00000539455 CLASP1Q7Z460 1538 aa10.4□□□□□ -0.74
CELF1-220ENST00000539455 MROH2BQ7Z745 1585 aa10.39□□□□□ -0.75
CELF1-220ENST00000539455 AQRO60306 1485 aaKnown RBP eCLIP10.38□□□□□ -0.759e-7■■■□□ 15.9
CELF1-220ENST00000539455 GAPVD1Q14C86 1478 aa10.37□□□□□ -0.75
CELF1-220ENST00000539455 PIAS4Q8N2W9 510 aaPredicted RBP10.31□□□□□ -0.76
CELF1-220ENST00000539455 DISP3Q9P2K9 1392 aa10.3□□□□□ -0.76
CELF1-220ENST00000539455 TOPBP1Q92547 1522 aa10.29□□□□□ -0.76
CELF1-220ENST00000539455 KIF13AQ9H1H9 1805 aa10.29□□□□□ -0.76
CELF1-220ENST00000539455 SYNJ2O15056 1496 aa10.29□□□□□ -0.76
CELF1-220ENST00000539455 SYNJ1O43426 1573 aa10.28□□□□□ -0.76
CELF1-220ENST00000539455 ADGRL1O94910 1474 aa10.26□□□□□ -0.77
CELF1-220ENST00000539455 CHMP7Q8WUX9 453 aaPredicted RBP10.25□□□□□ -0.77
CELF1-220ENST00000539455 SNAPC4Q5SXM2 1469 aa10.24□□□□□ -0.77
CELF1-220ENST00000539455 TARBP1Q13395 1621 aaKnown RBP10.23□□□□□ -0.77
CELF1-220ENST00000539455 KDM6BO15054 1643 aa10.22□□□□□ -0.77
CELF1-220ENST00000539455 FAM69CQ0P6D2 419 aa10.22□□□□□ -0.77
CELF1-220ENST00000539455 TDRD9Q8NDG6 1382 aaKnown RBP10.19□□□□□ -0.78
CELF1-220ENST00000539455 ABCC10Q5T3U5 1492 aa10.18□□□□□ -0.78
CELF1-220ENST00000539455 WIZO95785 1651 aa10.17□□□□□ -0.78
CELF1-220ENST00000539455 ABCC8Q09428 1581 aa10.16□□□□□ -0.78
CELF1-220ENST00000539455 DNMBPQ6XZF7 1577 aa10.15□□□□□ -0.78
CELF1-220ENST00000539455 MAGI1Q96QZ7 1491 aaPredicted RBP10.15□□□□□ -0.78
CELF1-220ENST00000539455 POLA1P09884 1462 aaPredicted RBP10.14□□□□□ -0.79
CELF1-220ENST00000539455 RAD54L2Q9Y4B4 1467 aa10.13□□□□□ -0.79
CELF1-220ENST00000539455 DIP2BQ9P265 1576 aa10.11□□□□□ -0.79
CELF1-220ENST00000539455 GRIN2BQ13224 1484 aa10.08□□□□□ -0.8
CELF1-220ENST00000539455 TSPOAP1O95153 1857 aa10.08□□□□□ -0.8
CELF1-220ENST00000539455 SOGA1O94964 1423 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms