RNA–Protein interactions for RNA: ENST00000536845.6

SEMA6D-207, Transcript of semaphorin 6D, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SEMA6D, Length 3,754 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6D-207ENST00000536845 NISCHQ9Y2I1 1504 aa26.64■■□□□ 1.85
SEMA6D-207ENST00000536845 DCAF8L2P0C7V8 631 aa23.5■■□□□ 1.35
SEMA6D-207ENST00000536845 CCDC180Q9P1Z9 1646 aa22.95■■□□□ 1.27
SEMA6D-207ENST00000536845 ABCC9O60706 1549 aa22.84■■□□□ 1.25
SEMA6D-207ENST00000536845 SHROOM4Q9ULL8 1493 aa22.47■■□□□ 1.19
SEMA6D-207ENST00000536845 ZCCHC6Q5VYS8 1495 aaKnown RBP22.19■■□□□ 1.14
SEMA6D-207ENST00000536845 PABPN1Q86U42 306 aaKnown RBP eCLIP21.79■■□□□ 1.08
SEMA6D-207ENST00000536845 NACADO15069 1562 aa21.75■■□□□ 1.07
SEMA6D-207ENST00000536845 RB1CC1Q8TDY2 1594 aa21.75■■□□□ 1.07
SEMA6D-207ENST00000536845 SUPT5HO00267 1087 aaKnown RBP21.69■■□□□ 1.06
SEMA6D-207ENST00000536845 DCAF1Q9Y4B6 1507 aa21.68■■□□□ 1.06
SEMA6D-207ENST00000536845 SCRIBQ14160 1630 aa21.65■■□□□ 1.06
SEMA6D-207ENST00000536845 MYO15BQ96JP2 1530 aa21.48■■□□□ 1.03
SEMA6D-207ENST00000536845 CECR2Q9BXF3 1484 aa20.9■□□□□ 0.94
SEMA6D-207ENST00000536845 BICRAQ9NZM4 1560 aa20.78■□□□□ 0.92
SEMA6D-207ENST00000536845 UNC13AQ9UPW8 1703 aa20.76■□□□□ 0.91
SEMA6D-207ENST00000536845 RSF1Q96T23 1441 aaPredicted RBP20.72■□□□□ 0.91
SEMA6D-207ENST00000536845 MROH2BQ7Z745 1585 aa20.65■□□□□ 0.9
SEMA6D-207ENST00000536845 BAZ1AQ9NRL2 1556 aaPredicted RBP20.64■□□□□ 0.9
SEMA6D-207ENST00000536845 SMARCA4P51532 1647 aa20.45■□□□□ 0.86
SEMA6D-207ENST00000536845 EIF4G1Q04637 1599 aaKnown RBP20.44■□□□□ 0.86
SEMA6D-207ENST00000536845 BAZ1BQ9UIG0 1483 aaKnown RBP20.43■□□□□ 0.86
SEMA6D-207ENST00000536845 WIZO95785 1651 aa20.4■□□□□ 0.86
SEMA6D-207ENST00000536845 ATAD2BQ9ULI0 1458 aa20.37■□□□□ 0.85
SEMA6D-207ENST00000536845 DNAJC5BQ9UF47 199 aa20.34■□□□□ 0.85
SEMA6D-207ENST00000536845 SMARCA2P51531 1590 aa20.31■□□□□ 0.84
SEMA6D-207ENST00000536845 TRIM41Q8WV44 630 aa20.26■□□□□ 0.83
SEMA6D-207ENST00000536845 CC2D2AQ9P2K1 1620 aa20.23■□□□□ 0.83
SEMA6D-207ENST00000536845 FAM9AQ8IZU1 332 aaPredicted RBP20.18■□□□□ 0.82
SEMA6D-207ENST00000536845 EHMT2Q96KQ7 1210 aa20.17■□□□□ 0.82
SEMA6D-207ENST00000536845 NCAPD3P42695 1498 aa20.15■□□□□ 0.82
SEMA6D-207ENST00000536845 TOP2AP11388 1531 aaKnown RBP20.13■□□□□ 0.81
SEMA6D-207ENST00000536845 CHIC1Q5VXU3 224 aa20.13■□□□□ 0.81
SEMA6D-207ENST00000536845 CCDC88BA6NC98 1476 aa20.12■□□□□ 0.81
SEMA6D-207ENST00000536845 HMGXB3Q12766 1538 aa19.93■□□□□ 0.78
SEMA6D-207ENST00000536845 PEG3Q9GZU2 1588 aa19.91■□□□□ 0.78
SEMA6D-207ENST00000536845 CADPSQ9ULU8 1353 aa19.88■□□□□ 0.77
SEMA6D-207ENST00000536845 ERCC6Q03468 1493 aa19.77■□□□□ 0.76
SEMA6D-207ENST00000536845 NESP48681 1621 aa19.77■□□□□ 0.76
SEMA6D-207ENST00000536845 PDS5BQ9NTI5 1447 aa19.72■□□□□ 0.75
SEMA6D-207ENST00000536845 WRNQ14191 1432 aaPredicted RBP eCLIP19.7■□□□□ 0.74
SEMA6D-207ENST00000536845 RANGAP1P46060 587 aaPredicted RBP19.69■□□□□ 0.74
SEMA6D-207ENST00000536845 ABCC8Q09428 1581 aa19.67■□□□□ 0.74
SEMA6D-207ENST00000536845 CFTRP13569 1480 aa19.65■□□□□ 0.74
SEMA6D-207ENST00000536845 FANCD2Q9BXW9 1451 aa19.64■□□□□ 0.73
SEMA6D-207ENST00000536845 UBTFP17480 764 aaKnown RBP19.63■□□□□ 0.73
SEMA6D-207ENST00000536845 LOC105371045A0A1W2PR82 267 aa19.61■□□□□ 0.73
SEMA6D-207ENST00000536845 CEP164Q9UPV0 1460 aa19.57■□□□□ 0.72
SEMA6D-207ENST00000536845 FBLN2P98095 1184 aa19.5■□□□□ 0.71
SEMA6D-207ENST00000536845 CSRNP3Q8WYN3 585 aa19.48■□□□□ 0.71
SEMA6D-207ENST00000536845 LAMC3Q9Y6N6 1575 aa19.45■□□□□ 0.7
SEMA6D-207ENST00000536845 SOGA1O94964 1423 aa19.38■□□□□ 0.69
SEMA6D-207ENST00000536845 TDRD9Q8NDG6 1382 aaKnown RBP19.36■□□□□ 0.69
SEMA6D-207ENST00000536845 CUX2O14529 1486 aa19.33■□□□□ 0.69
SEMA6D-207ENST00000536845 TTBK1Q5TCY1 1321 aaPredicted RBP19.31■□□□□ 0.68
SEMA6D-207ENST00000536845 FGD5Q6ZNL6 1462 aa19.3■□□□□ 0.68
SEMA6D-207ENST00000536845 KIF27Q86VH2 1401 aa19.3■□□□□ 0.68
SEMA6D-207ENST00000536845 MRC2Q9UBG0 1479 aa19.29■□□□□ 0.68
SEMA6D-207ENST00000536845 RAD54L2Q9Y4B4 1467 aa19.29■□□□□ 0.68
SEMA6D-207ENST00000536845 SYNJ1O43426 1573 aa19.28■□□□□ 0.68
SEMA6D-207ENST00000536845 CUX1P39880 1505 aa19.28■□□□□ 0.68
SEMA6D-207ENST00000536845 TOPBP1Q92547 1522 aa19.27■□□□□ 0.67
SEMA6D-207ENST00000536845 ATP1B4Q9UN42 357 aaPredicted RBP19.25■□□□□ 0.67
SEMA6D-207ENST00000536845 CHMP7Q8WUX9 453 aaPredicted RBP19.23■□□□□ 0.67
SEMA6D-207ENST00000536845 RUSC2Q8N2Y8 1516 aa19.22■□□□□ 0.67
SEMA6D-207ENST00000536845 URB2Q14146 1524 aaKnown RBP19.21■□□□□ 0.67
SEMA6D-207ENST00000536845 POLA1P09884 1462 aaPredicted RBP19.18■□□□□ 0.66
SEMA6D-207ENST00000536845 EEA1Q15075 1411 aa19.17■□□□□ 0.66
SEMA6D-207ENST00000536845 DNMBPQ6XZF7 1577 aa19.16■□□□□ 0.66
SEMA6D-207ENST00000536845 APLP2Q06481 763 aa19.15■□□□□ 0.66
SEMA6D-207ENST00000536845 TOP2BQ02880 1626 aa19.15■□□□□ 0.66
SEMA6D-207ENST00000536845 KIF21AQ7Z4S6 1674 aa19.15■□□□□ 0.66
SEMA6D-207ENST00000536845 P3H3Q8IVL6 736 aa19.14■□□□□ 0.65
SEMA6D-207ENST00000536845 AQRO60306 1485 aaKnown RBP eCLIP19.13■□□□□ 0.65
SEMA6D-207ENST00000536845 CARMIL1Q5VZK9 1371 aa19.11■□□□□ 0.65
SEMA6D-207ENST00000536845 PPARGC1BQ86YN6 1023 aaKnown RBP19.06■□□□□ 0.64
SEMA6D-207ENST00000536845 GAPVD1Q14C86 1478 aa19.05■□□□□ 0.64
SEMA6D-207ENST00000536845 IGF1RP08069 1367 aa19.03■□□□□ 0.64
SEMA6D-207ENST00000536845 IFT140Q96RY7 1462 aa19.02■□□□□ 0.64
SEMA6D-207ENST00000536845 GOLGA3Q08378 1498 aa18.99■□□□□ 0.63
SEMA6D-207ENST00000536845 PRDM2Q13029 1718 aa18.99■□□□□ 0.63
SEMA6D-207ENST00000536845 ZNF608Q9ULD9 1512 aaPredicted RBP18.97■□□□□ 0.63
SEMA6D-207ENST00000536845 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.96■□□□□ 0.63
SEMA6D-207ENST00000536845 HNRNPUL2Q1KMD3 747 aaKnown RBP18.96■□□□□ 0.63
SEMA6D-207ENST00000536845 BIVM-ERCC5R4GMW8 1640 aa18.96■□□□□ 0.63
SEMA6D-207ENST00000536845 ABCA10Q8WWZ4 1543 aa18.93■□□□□ 0.62
SEMA6D-207ENST00000536845 RAPGEF2Q9Y4G8 1499 aa18.92■□□□□ 0.62
SEMA6D-207ENST00000536845 ARID3CA6NKF2 412 aa18.91■□□□□ 0.62
SEMA6D-207ENST00000536845 WDR62O43379 1518 aa18.91■□□□□ 0.62
SEMA6D-207ENST00000536845 GRIN2BQ13224 1484 aa18.89■□□□□ 0.61
SEMA6D-207ENST00000536845 TNIKQ9UKE5 1360 aa18.85■□□□□ 0.61
SEMA6D-207ENST00000536845 CLIP1P30622 1438 aa18.84■□□□□ 0.61
SEMA6D-207ENST00000536845 SNAPC4Q5SXM2 1469 aa18.82■□□□□ 0.6
SEMA6D-207ENST00000536845 CEP162Q5TB80 1403 aa18.81■□□□□ 0.6
SEMA6D-207ENST00000536845 THOC2Q8NI27 1593 aaKnown RBP18.8■□□□□ 0.6
SEMA6D-207ENST00000536845 FHAD1B1AJZ9 1412 aa18.79■□□□□ 0.6
SEMA6D-207ENST00000536845 OSCARQ8IYS5 282 aa18.75■□□□□ 0.59
SEMA6D-207ENST00000536845 PRXQ9BXM0 1461 aa18.74■□□□□ 0.59
SEMA6D-207ENST00000536845 JPH4Q96JJ6 628 aa18.74■□□□□ 0.59
SEMA6D-207ENST00000536845 TARBP1Q13395 1621 aaKnown RBP18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms