RNA–Protein interactions for RNA: ENST00000535021.5

LPCAT3-202, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-202ENST00000535021 NISCHQ9Y2I1 1504 aa20.77■□□□□ 0.92
LPCAT3-202ENST00000535021 AEBP2Q6ZN18 517 aaPredicted RBP19.94■□□□□ 0.78
LPCAT3-202ENST00000535021 CHIC1Q5VXU3 224 aa18.66■□□□□ 0.58
LPCAT3-202ENST00000535021 CCDC180Q9P1Z9 1646 aa18.27■□□□□ 0.52
LPCAT3-202ENST00000535021 ZCCHC6Q5VYS8 1495 aaKnown RBP17.42■□□□□ 0.38
LPCAT3-202ENST00000535021 ABCC9O60706 1549 aa17.38■□□□□ 0.37
LPCAT3-202ENST00000535021 DCAF1Q9Y4B6 1507 aa17.22■□□□□ 0.35
LPCAT3-202ENST00000535021 MYO15BQ96JP2 1530 aa17.11■□□□□ 0.33
LPCAT3-202ENST00000535021 DCAF8L2P0C7V8 631 aa17.06■□□□□ 0.32
LPCAT3-202ENST00000535021 SENP3Q9H4L4 574 aaPredicted RBP17.05■□□□□ 0.32
LPCAT3-202ENST00000535021 NACADO15069 1562 aa17.05■□□□□ 0.32
LPCAT3-202ENST00000535021 RB1CC1Q8TDY2 1594 aa16.94■□□□□ 0.3
LPCAT3-202ENST00000535021 PHF23Q9BUL5 403 aaPredicted RBP16.79■□□□□ 0.28
LPCAT3-202ENST00000535021 SCRIBQ14160 1630 aa16.69■□□□□ 0.26
LPCAT3-202ENST00000535021 SHROOM4Q9ULL8 1493 aa16.65■□□□□ 0.26
LPCAT3-202ENST00000535021 UNC13AQ9UPW8 1703 aa16.6■□□□□ 0.25
LPCAT3-202ENST00000535021 BICRAQ9NZM4 1560 aa16.44■□□□□ 0.22
LPCAT3-202ENST00000535021 PABPN1Q86U42 306 aaKnown RBP eCLIP16.29■□□□□ 0.2
LPCAT3-202ENST00000535021 CECR2Q9BXF3 1484 aa16.11■□□□□ 0.17
LPCAT3-202ENST00000535021 BAZ1AQ9NRL2 1556 aaPredicted RBP16.06■□□□□ 0.16
LPCAT3-202ENST00000535021 SMARCA4P51532 1647 aa16.02■□□□□ 0.16
LPCAT3-202ENST00000535021 MROH2BQ7Z745 1585 aa16.01■□□□□ 0.15
LPCAT3-202ENST00000535021 RSF1Q96T23 1441 aaPredicted RBP15.99■□□□□ 0.15
LPCAT3-202ENST00000535021 FOXD1Q16676 465 aa15.96■□□□□ 0.15
LPCAT3-202ENST00000535021 EIF4G1Q04637 1599 aaKnown RBP15.95■□□□□ 0.14
LPCAT3-202ENST00000535021 SUPT5HO00267 1087 aaKnown RBP15.89■□□□□ 0.13
LPCAT3-202ENST00000535021 PEG3Q9GZU2 1588 aa15.87■□□□□ 0.13
LPCAT3-202ENST00000535021 WIZO95785 1651 aa15.86■□□□□ 0.13
LPCAT3-202ENST00000535021 SMARCA2P51531 1590 aa15.8■□□□□ 0.12
LPCAT3-202ENST00000535021 ATAD2BQ9ULI0 1458 aa15.8■□□□□ 0.12
LPCAT3-202ENST00000535021 CC2D2AQ9P2K1 1620 aa15.76■□□□□ 0.11
LPCAT3-202ENST00000535021 TOP2AP11388 1531 aaKnown RBP15.73■□□□□ 0.11
LPCAT3-202ENST00000535021 NCAPD3P42695 1498 aa15.72■□□□□ 0.11
LPCAT3-202ENST00000535021 HMGXB3Q12766 1538 aa15.71■□□□□ 0.11
LPCAT3-202ENST00000535021 BAZ1BQ9UIG0 1483 aaKnown RBP15.69■□□□□ 0.1
LPCAT3-202ENST00000535021 CCDC88BA6NC98 1476 aa15.52■□□□□ 0.08
LPCAT3-202ENST00000535021 DNAJC5BQ9UF47 199 aa15.5■□□□□ 0.07
LPCAT3-202ENST00000535021 POTEDQ86YR6 584 aa15.38■□□□□ 0.05
LPCAT3-202ENST00000535021 CFTRP13569 1480 aa15.3■□□□□ 0.04
LPCAT3-202ENST00000535021 CADPSQ9ULU8 1353 aa15.27■□□□□ 0.04
LPCAT3-202ENST00000535021 PRDM2Q13029 1718 aa15.26■□□□□ 0.03
LPCAT3-202ENST00000535021 LAMC3Q9Y6N6 1575 aa15.24■□□□□ 0.03
LPCAT3-202ENST00000535021 NESP48681 1621 aa15.19■□□□□ 0.02
LPCAT3-202ENST00000535021 PLPPR3Q6T4P5 718 aa15.17■□□□□ 0.02
LPCAT3-202ENST00000535021 ABCC8Q09428 1581 aa15.11■□□□□ 0.01
LPCAT3-202ENST00000535021 FANCD2Q9BXW9 1451 aa15.1■□□□□ 0.01
LPCAT3-202ENST00000535021 PDS5BQ9NTI5 1447 aa15.09■□□□□ 0.01
LPCAT3-202ENST00000535021 MSH5O43196 834 aa15.06■□□□□ 0
LPCAT3-202ENST00000535021 WRNQ14191 1432 aaPredicted RBP eCLIP15.06■□□□□ 0
LPCAT3-202ENST00000535021 KIF21AQ7Z4S6 1674 aa15.05■□□□□ -0
LPCAT3-202ENST00000535021 CEP164Q9UPV0 1460 aa15.04■□□□□ -0
LPCAT3-202ENST00000535021 SYNJ1O43426 1573 aa15.02□□□□□ -0.01
LPCAT3-202ENST00000535021 BIVM-ERCC5R4GMW8 1640 aa15□□□□□ -0.01
LPCAT3-202ENST00000535021 TOP2BQ02880 1626 aa14.99□□□□□ -0.01
LPCAT3-202ENST00000535021 CUX1P39880 1505 aa14.99□□□□□ -0.01
LPCAT3-202ENST00000535021 TRIM41Q8WV44 630 aa14.99□□□□□ -0.01
LPCAT3-202ENST00000535021 DNMBPQ6XZF7 1577 aa14.95□□□□□ -0.02
LPCAT3-202ENST00000535021 URB2Q14146 1524 aaKnown RBP14.93□□□□□ -0.02
LPCAT3-202ENST00000535021 ERCC6Q03468 1493 aa14.93□□□□□ -0.02
LPCAT3-202ENST00000535021 MRC2Q9UBG0 1479 aa14.93□□□□□ -0.02
LPCAT3-202ENST00000535021 TOPBP1Q92547 1522 aa14.92□□□□□ -0.02
LPCAT3-202ENST00000535021 THOC2Q8NI27 1593 aaKnown RBP14.89□□□□□ -0.03
LPCAT3-202ENST00000535021 WDR62O43379 1518 aa14.88□□□□□ -0.03
LPCAT3-202ENST00000535021 FGD5Q6ZNL6 1462 aa14.86□□□□□ -0.03
LPCAT3-202ENST00000535021 POLA1P09884 1462 aaPredicted RBP14.83□□□□□ -0.03
LPCAT3-202ENST00000535021 PIAS4Q8N2W9 510 aaPredicted RBP14.83□□□□□ -0.04
LPCAT3-202ENST00000535021 SOGA1O94964 1423 aa14.76□□□□□ -0.05
LPCAT3-202ENST00000535021 WDR97A6NE52 1622 aa14.76□□□□□ -0.05
LPCAT3-202ENST00000535021 ABCA10Q8WWZ4 1543 aa14.75□□□□□ -0.05
LPCAT3-202ENST00000535021 CUX2O14529 1486 aa14.75□□□□□ -0.05
LPCAT3-202ENST00000535021 RAD54L2Q9Y4B4 1467 aa14.75□□□□□ -0.05
LPCAT3-202ENST00000535021 EEA1Q15075 1411 aa14.75□□□□□ -0.05
LPCAT3-202ENST00000535021 TARBP1Q13395 1621 aaKnown RBP14.74□□□□□ -0.05
LPCAT3-202ENST00000535021 RUSC2Q8N2Y8 1516 aa14.72□□□□□ -0.05
LPCAT3-202ENST00000535021 IFT140Q96RY7 1462 aa14.71□□□□□ -0.05
LPCAT3-202ENST00000535021 KIF27Q86VH2 1401 aa14.7□□□□□ -0.06
LPCAT3-202ENST00000535021 ABCA5Q8WWZ7 1642 aa14.66□□□□□ -0.06
LPCAT3-202ENST00000535021 FAM9AQ8IZU1 332 aaPredicted RBP14.66□□□□□ -0.06
LPCAT3-202ENST00000535021 PPP6R1Q9UPN7 881 aa14.63□□□□□ -0.07
LPCAT3-202ENST00000535021 CSRNP3Q8WYN3 585 aa14.62□□□□□ -0.07
LPCAT3-202ENST00000535021 TDRD9Q8NDG6 1382 aaKnown RBP14.6□□□□□ -0.07
LPCAT3-202ENST00000535021 GAPVD1Q14C86 1478 aa14.6□□□□□ -0.07
LPCAT3-202ENST00000535021 ZNF608Q9ULD9 1512 aaPredicted RBP14.6□□□□□ -0.07
LPCAT3-202ENST00000535021 ERICH3Q5RHP9 1530 aa14.58□□□□□ -0.08
LPCAT3-202ENST00000535021 EIF4G3O43432 1585 aaKnown RBP14.58□□□□□ -0.08
LPCAT3-202ENST00000535021 KIF21BO75037 1637 aa14.58□□□□□ -0.08
LPCAT3-202ENST00000535021 IGF1RP08069 1367 aa14.58□□□□□ -0.08
LPCAT3-202ENST00000535021 ADRA2BP18089 450 aa14.57□□□□□ -0.08
LPCAT3-202ENST00000535021 PBRM1Q86U86 1689 aa14.57□□□□□ -0.08
LPCAT3-202ENST00000535021 AQRO60306 1485 aaKnown RBP eCLIP14.57□□□□□ -0.085e-6■■□□□ 14.3
LPCAT3-202ENST00000535021 PRXQ9BXM0 1461 aa14.57□□□□□ -0.08
LPCAT3-202ENST00000535021 CUL7Q14999 1698 aa14.55□□□□□ -0.08
LPCAT3-202ENST00000535021 GRIN2BQ13224 1484 aa14.54□□□□□ -0.08
LPCAT3-202ENST00000535021 GOLGA3Q08378 1498 aa14.51□□□□□ -0.09
LPCAT3-202ENST00000535021 CARMIL1Q5VZK9 1371 aa14.5□□□□□ -0.09
LPCAT3-202ENST00000535021 ADAMTS12P58397 1594 aa14.49□□□□□ -0.09
LPCAT3-202ENST00000535021 LOC105371045A0A1W2PR82 267 aa14.49□□□□□ -0.09
LPCAT3-202ENST00000535021 RAPGEF2Q9Y4G8 1499 aa14.49□□□□□ -0.09
LPCAT3-202ENST00000535021 SNAPC4Q5SXM2 1469 aa14.45□□□□□ -0.1
LPCAT3-202ENST00000535021 MAGI1Q96QZ7 1491 aaPredicted RBP14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms