RNA–Protein interactions for RNA: ENST00000534622.5

CHRNA6-205, Transcript of cholinergic receptor nicotinic alpha 6 subunit, humanhuman

TSL 2 BASIC

Gene CHRNA6, Length 1,872 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA6-205ENST00000534622 NISCHQ9Y2I1 1504 aa19.53■□□□□ 0.72
CHRNA6-205ENST00000534622 CCDC180Q9P1Z9 1646 aa17.09■□□□□ 0.33
CHRNA6-205ENST00000534622 ZCCHC6Q5VYS8 1495 aaKnown RBP16.38■□□□□ 0.21
CHRNA6-205ENST00000534622 ABCC9O60706 1549 aa16.24■□□□□ 0.19
CHRNA6-205ENST00000534622 DCAF1Q9Y4B6 1507 aa16.2■□□□□ 0.18
CHRNA6-205ENST00000534622 SHROOM4Q9ULL8 1493 aa16.19■□□□□ 0.18
CHRNA6-205ENST00000534622 MYO15BQ96JP2 1530 aa16.08■□□□□ 0.16
CHRNA6-205ENST00000534622 DCAF8L2P0C7V8 631 aa16.04■□□□□ 0.16
CHRNA6-205ENST00000534622 AEBP2Q6ZN18 517 aaPredicted RBP16.03■□□□□ 0.16
CHRNA6-205ENST00000534622 NACADO15069 1562 aa15.97■□□□□ 0.15
CHRNA6-205ENST00000534622 SUPT5HO00267 1087 aaKnown RBP15.92■□□□□ 0.14
CHRNA6-205ENST00000534622 RB1CC1Q8TDY2 1594 aa15.84■□□□□ 0.13
CHRNA6-205ENST00000534622 CHIC1Q5VXU3 224 aa15.82■□□□□ 0.12
CHRNA6-205ENST00000534622 SCRIBQ14160 1630 aa15.63■□□□□ 0.09
CHRNA6-205ENST00000534622 UNC13AQ9UPW8 1703 aa15.49■□□□□ 0.07
CHRNA6-205ENST00000534622 BICRAQ9NZM4 1560 aa15.4■□□□□ 0.06
CHRNA6-205ENST00000534622 HRCP23327 699 aa15.37■□□□□ 0.05
CHRNA6-205ENST00000534622 PABPN1Q86U42 306 aaKnown RBP eCLIP15.28■□□□□ 0.04
CHRNA6-205ENST00000534622 PCGF6Q9BYE7 350 aa15.21■□□□□ 0.03
CHRNA6-205ENST00000534622 CECR2Q9BXF3 1484 aa15.17■□□□□ 0.02
CHRNA6-205ENST00000534622 LOC105371045A0A1W2PR82 267 aa15.11■□□□□ 0.01
CHRNA6-205ENST00000534622 RSF1Q96T23 1441 aaPredicted RBP15.09■□□□□ 0.01
CHRNA6-205ENST00000534622 BAZ1AQ9NRL2 1556 aaPredicted RBP15.07■□□□□ 0
CHRNA6-205ENST00000534622 MROH2BQ7Z745 1585 aa15.06■□□□□ 0
CHRNA6-205ENST00000534622 SMARCA4P51532 1647 aa15.02□□□□□ -0.01
CHRNA6-205ENST00000534622 PPARGC1BQ86YN6 1023 aaKnown RBP14.99□□□□□ -0.01
CHRNA6-205ENST00000534622 TRIM26Q12899 539 aaPredicted RBP14.93□□□□□ -0.02
CHRNA6-205ENST00000534622 EIF4G1Q04637 1599 aaKnown RBP14.91□□□□□ -0.02
CHRNA6-205ENST00000534622 WIZO95785 1651 aa14.9□□□□□ -0.02
CHRNA6-205ENST00000534622 PEG3Q9GZU2 1588 aa14.9□□□□□ -0.02
CHRNA6-205ENST00000534622 TRIM41Q8WV44 630 aa14.84□□□□□ -0.03
CHRNA6-205ENST00000534622 ATAD2BQ9ULI0 1458 aa14.84□□□□□ -0.03
CHRNA6-205ENST00000534622 SMARCA2P51531 1590 aa14.81□□□□□ -0.04
CHRNA6-205ENST00000534622 TOP2AP11388 1531 aaKnown RBP14.78□□□□□ -0.04
CHRNA6-205ENST00000534622 NCAPD3P42695 1498 aa14.77□□□□□ -0.05
CHRNA6-205ENST00000534622 CC2D2AQ9P2K1 1620 aa14.72□□□□□ -0.05
CHRNA6-205ENST00000534622 HMGXB3Q12766 1538 aa14.71□□□□□ -0.05
CHRNA6-205ENST00000534622 BAZ1BQ9UIG0 1483 aaKnown RBP14.7□□□□□ -0.06
CHRNA6-205ENST00000534622 FAM9AQ8IZU1 332 aaPredicted RBP14.69□□□□□ -0.06
CHRNA6-205ENST00000534622 ZEB1P37275 1124 aaPredicted RBP14.69□□□□□ -0.06
CHRNA6-205ENST00000534622 CCDC88BA6NC98 1476 aa14.62□□□□□ -0.07
CHRNA6-205ENST00000534622 EHMT2Q96KQ7 1210 aa14.54□□□□□ -0.08
CHRNA6-205ENST00000534622 DNAJC5BQ9UF47 199 aa14.51□□□□□ -0.09
CHRNA6-205ENST00000534622 ABCC8Q09428 1581 aa14.4□□□□□ -0.1
CHRNA6-205ENST00000534622 CFTRP13569 1480 aa14.38□□□□□ -0.11
CHRNA6-205ENST00000534622 CADPSQ9ULU8 1353 aa14.34□□□□□ -0.11
CHRNA6-205ENST00000534622 WRNQ14191 1432 aaPredicted RBP eCLIP14.33□□□□□ -0.12
CHRNA6-205ENST00000534622 CEP162Q5TB80 1403 aa14.27□□□□□ -0.12
CHRNA6-205ENST00000534622 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.27□□□□□ -0.12
CHRNA6-205ENST00000534622 SOGA1O94964 1423 aa14.26□□□□□ -0.13
CHRNA6-205ENST00000534622 CCER1Q8TC90 406 aaPredicted RBP14.25□□□□□ -0.13
CHRNA6-205ENST00000534622 TNIKQ9UKE5 1360 aa14.25□□□□□ -0.13
CHRNA6-205ENST00000534622 EEA1Q15075 1411 aa14.25□□□□□ -0.13
CHRNA6-205ENST00000534622 LAMC3Q9Y6N6 1575 aa14.24□□□□□ -0.13
CHRNA6-205ENST00000534622 PRDM2Q13029 1718 aa14.24□□□□□ -0.13
CHRNA6-205ENST00000534622 SCAF1Q9H7N4 1312 aaKnown RBP14.24□□□□□ -0.13
CHRNA6-205ENST00000534622 NESP48681 1621 aa14.23□□□□□ -0.13
CHRNA6-205ENST00000534622 RUSC2Q8N2Y8 1516 aa14.2□□□□□ -0.14
CHRNA6-205ENST00000534622 CSRNP3Q8WYN3 585 aa14.17□□□□□ -0.14
CHRNA6-205ENST00000534622 FANCD2Q9BXW9 1451 aa14.16□□□□□ -0.14
CHRNA6-205ENST00000534622 GOLGA3Q08378 1498 aa14.15□□□□□ -0.14
CHRNA6-205ENST00000534622 PDS5BQ9NTI5 1447 aa14.14□□□□□ -0.15
CHRNA6-205ENST00000534622 PELP1Q8IZL8 1130 aaKnown RBP14.12□□□□□ -0.15
CHRNA6-205ENST00000534622 TTBK1Q5TCY1 1321 aaPredicted RBP14.12□□□□□ -0.15
CHRNA6-205ENST00000534622 SYNJ1O43426 1573 aa14.12□□□□□ -0.15
CHRNA6-205ENST00000534622 UBTFP17480 764 aaKnown RBP14.1□□□□□ -0.15
CHRNA6-205ENST00000534622 KIF21BO75037 1637 aa14.1□□□□□ -0.15
CHRNA6-205ENST00000534622 TOP2BQ02880 1626 aa14.1□□□□□ -0.15
CHRNA6-205ENST00000534622 CUX1P39880 1505 aa14.09□□□□□ -0.15
CHRNA6-205ENST00000534622 BIVM-ERCC5R4GMW8 1640 aa14.08□□□□□ -0.16
CHRNA6-205ENST00000534622 CEP164Q9UPV0 1460 aa14.07□□□□□ -0.16
CHRNA6-205ENST00000534622 DIEXFQ68CQ4 756 aaKnown RBP14.06□□□□□ -0.16
CHRNA6-205ENST00000534622 ACIN1Q9UKV3 1341 aaKnown RBP14.06□□□□□ -0.16
CHRNA6-205ENST00000534622 KIF21AQ7Z4S6 1674 aa14.04□□□□□ -0.16
CHRNA6-205ENST00000534622 NEUROD1Q13562 356 aa14.01□□□□□ -0.17
CHRNA6-205ENST00000534622 DNMBPQ6XZF7 1577 aa14.01□□□□□ -0.17
CHRNA6-205ENST00000534622 PHF23Q9BUL5 403 aaPredicted RBP14.01□□□□□ -0.17
CHRNA6-205ENST00000534622 URB2Q14146 1524 aaKnown RBP14□□□□□ -0.17
CHRNA6-205ENST00000534622 TOPBP1Q92547 1522 aa14□□□□□ -0.17
CHRNA6-205ENST00000534622 CLIP1P30622 1438 aa13.97□□□□□ -0.17
CHRNA6-205ENST00000534622 MRC2Q9UBG0 1479 aa13.96□□□□□ -0.17
CHRNA6-205ENST00000534622 ZNF316A6NFI3 1004 aaPredicted RBP13.95□□□□□ -0.18
CHRNA6-205ENST00000534622 CENPBP07199 599 aaPredicted RBP13.95□□□□□ -0.18
CHRNA6-205ENST00000534622 VPS8Q8N3P4 1428 aa13.95□□□□□ -0.18
CHRNA6-205ENST00000534622 FGD5Q6ZNL6 1462 aa13.94□□□□□ -0.18
CHRNA6-205ENST00000534622 ERCC6Q03468 1493 aa13.92□□□□□ -0.18
CHRNA6-205ENST00000534622 POLA1P09884 1462 aaPredicted RBP13.92□□□□□ -0.18
CHRNA6-205ENST00000534622 RAPGEF2Q9Y4G8 1499 aa13.92□□□□□ -0.18
CHRNA6-205ENST00000534622 WDR62O43379 1518 aa13.91□□□□□ -0.18
CHRNA6-205ENST00000534622 THOC2Q8NI27 1593 aaKnown RBP13.89□□□□□ -0.19
CHRNA6-205ENST00000534622 GTF3C3Q9Y5Q9 886 aa13.88□□□□□ -0.19
CHRNA6-205ENST00000534622 HNRNPUL2Q1KMD3 747 aaKnown RBP13.87□□□□□ -0.19
CHRNA6-205ENST00000534622 ABCA10Q8WWZ4 1543 aa13.85□□□□□ -0.19
CHRNA6-205ENST00000534622 RAD54L2Q9Y4B4 1467 aa13.85□□□□□ -0.19
CHRNA6-205ENST00000534622 KIF27Q86VH2 1401 aa13.84□□□□□ -0.19
CHRNA6-205ENST00000534622 CUX2O14529 1486 aa13.83□□□□□ -0.2
CHRNA6-205ENST00000534622 ERICH3Q5RHP9 1530 aa13.83□□□□□ -0.2
CHRNA6-205ENST00000534622 APLP2Q06481 763 aa13.82□□□□□ -0.2
CHRNA6-205ENST00000534622 TARBP1Q13395 1621 aaKnown RBP13.81□□□□□ -0.2
CHRNA6-205ENST00000534622 WDR97A6NE52 1622 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms