RNA–Protein interactions for RNA: ENST00000534505.1

AP001266.2-201, humanhuman

TSL 4 BASIC

Gene AP001266.2, Length 464 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001266.2-201ENST00000534505 NISCHQ9Y2I1 1504 aa12.83□□□□□ -0.35
AP001266.2-201ENST00000534505 AEBP2Q6ZN18 517 aaPredicted RBP12.33□□□□□ -0.44
AP001266.2-201ENST00000534505 CHIC1Q5VXU3 224 aa11.66□□□□□ -0.54
AP001266.2-201ENST00000534505 CCDC180Q9P1Z9 1646 aa11.18□□□□□ -0.62
AP001266.2-201ENST00000534505 ABCC9O60706 1549 aa11.06□□□□□ -0.64
AP001266.2-201ENST00000534505 DCAF8L2P0C7V8 631 aa10.98□□□□□ -0.65
AP001266.2-201ENST00000534505 SENP3Q9H4L4 574 aaPredicted RBP10.74□□□□□ -0.69
AP001266.2-201ENST00000534505 ZCCHC6Q5VYS8 1495 aaKnown RBP10.65□□□□□ -0.7
AP001266.2-201ENST00000534505 NACADO15069 1562 aa10.61□□□□□ -0.71
AP001266.2-201ENST00000534505 RB1CC1Q8TDY2 1594 aa10.58□□□□□ -0.72
AP001266.2-201ENST00000534505 MYO15BQ96JP2 1530 aa10.56□□□□□ -0.72
AP001266.2-201ENST00000534505 DCAF1Q9Y4B6 1507 aa10.56□□□□□ -0.72
AP001266.2-201ENST00000534505 PABPN1Q86U42 306 aaKnown RBP eCLIP10.51□□□□□ -0.73
AP001266.2-201ENST00000534505 PHF23Q9BUL5 403 aaPredicted RBP10.46□□□□□ -0.73
AP001266.2-201ENST00000534505 POTEDQ86YR6 584 aa10.36□□□□□ -0.75
AP001266.2-201ENST00000534505 SHROOM4Q9ULL8 1493 aa10.36□□□□□ -0.75
AP001266.2-201ENST00000534505 SCRIBQ14160 1630 aa10.33□□□□□ -0.76
AP001266.2-201ENST00000534505 BICRAQ9NZM4 1560 aa10.26□□□□□ -0.77
AP001266.2-201ENST00000534505 UNC13AQ9UPW8 1703 aa10.24□□□□□ -0.77
AP001266.2-201ENST00000534505 DNAJC5BQ9UF47 199 aa10.21□□□□□ -0.77
AP001266.2-201ENST00000534505 CECR2Q9BXF3 1484 aa10.04□□□□□ -0.8
AP001266.2-201ENST00000534505 FOXD1Q16676 465 aa10□□□□□ -0.81
AP001266.2-201ENST00000534505 EIF4G1Q04637 1599 aaKnown RBP9.98□□□□□ -0.81
AP001266.2-201ENST00000534505 CC2D2AQ9P2K1 1620 aa9.93□□□□□ -0.82
AP001266.2-201ENST00000534505 MROH2BQ7Z745 1585 aa9.91□□□□□ -0.82
AP001266.2-201ENST00000534505 SUPT5HO00267 1087 aaKnown RBP9.9□□□□□ -0.82
AP001266.2-201ENST00000534505 BAZ1AQ9NRL2 1556 aaPredicted RBP9.89□□□□□ -0.83
AP001266.2-201ENST00000534505 RSF1Q96T23 1441 aaPredicted RBP9.89□□□□□ -0.83
AP001266.2-201ENST00000534505 ATAD2BQ9ULI0 1458 aa9.88□□□□□ -0.83
AP001266.2-201ENST00000534505 NCAPD3P42695 1498 aa9.86□□□□□ -0.83
AP001266.2-201ENST00000534505 SMARCA4P51532 1647 aa9.85□□□□□ -0.83
AP001266.2-201ENST00000534505 SMARCA2P51531 1590 aa9.8□□□□□ -0.84
AP001266.2-201ENST00000534505 BAZ1BQ9UIG0 1483 aaKnown RBP9.78□□□□□ -0.84
AP001266.2-201ENST00000534505 WIZO95785 1651 aa9.76□□□□□ -0.85
AP001266.2-201ENST00000534505 PEG3Q9GZU2 1588 aa9.74□□□□□ -0.85
AP001266.2-201ENST00000534505 HMGXB3Q12766 1538 aa9.7□□□□□ -0.86
AP001266.2-201ENST00000534505 MSH5O43196 834 aa9.67□□□□□ -0.86
AP001266.2-201ENST00000534505 CCDC88BA6NC98 1476 aa9.65□□□□□ -0.87
AP001266.2-201ENST00000534505 CADPSQ9ULU8 1353 aa9.63□□□□□ -0.87
AP001266.2-201ENST00000534505 TOP2AP11388 1531 aaKnown RBP9.63□□□□□ -0.87
AP001266.2-201ENST00000534505 NESP48681 1621 aa9.6□□□□□ -0.87
AP001266.2-201ENST00000534505 PDS5BQ9NTI5 1447 aa9.54□□□□□ -0.88
AP001266.2-201ENST00000534505 CFTRP13569 1480 aa9.53□□□□□ -0.88
AP001266.2-201ENST00000534505 ERCC6Q03468 1493 aa9.51□□□□□ -0.89
AP001266.2-201ENST00000534505 LAMC3Q9Y6N6 1575 aa9.49□□□□□ -0.89
AP001266.2-201ENST00000534505 FANCD2Q9BXW9 1451 aa9.46□□□□□ -0.9
AP001266.2-201ENST00000534505 CEP164Q9UPV0 1460 aa9.4□□□□□ -0.91
AP001266.2-201ENST00000534505 MRC2Q9UBG0 1479 aa9.37□□□□□ -0.91
AP001266.2-201ENST00000534505 KIF21AQ7Z4S6 1674 aa9.34□□□□□ -0.91
AP001266.2-201ENST00000534505 URB2Q14146 1524 aaKnown RBP9.34□□□□□ -0.91
AP001266.2-201ENST00000534505 ABCC8Q09428 1581 aa9.33□□□□□ -0.92
AP001266.2-201ENST00000534505 TRIM41Q8WV44 630 aa9.32□□□□□ -0.92
AP001266.2-201ENST00000534505 CUX2O14529 1486 aa9.31□□□□□ -0.92
AP001266.2-201ENST00000534505 TOPBP1Q92547 1522 aa9.31□□□□□ -0.92
AP001266.2-201ENST00000534505 SOGA1O94964 1423 aa9.3□□□□□ -0.92
AP001266.2-201ENST00000534505 WRNQ14191 1432 aaPredicted RBP eCLIP9.3□□□□□ -0.92
AP001266.2-201ENST00000534505 PIAS4Q8N2W9 510 aaPredicted RBP9.28□□□□□ -0.92
AP001266.2-201ENST00000534505 WDR62O43379 1518 aa9.27□□□□□ -0.93
AP001266.2-201ENST00000534505 CUX1P39880 1505 aa9.26□□□□□ -0.93
AP001266.2-201ENST00000534505 THOC2Q8NI27 1593 aaKnown RBP9.26□□□□□ -0.93
AP001266.2-201ENST00000534505 RAD54L2Q9Y4B4 1467 aa9.26□□□□□ -0.93
AP001266.2-201ENST00000534505 TDRD9Q8NDG6 1382 aaKnown RBP9.25□□□□□ -0.93
AP001266.2-201ENST00000534505 DNMBPQ6XZF7 1577 aa9.24□□□□□ -0.93
AP001266.2-201ENST00000534505 PRDM2Q13029 1718 aa9.24□□□□□ -0.93
AP001266.2-201ENST00000534505 AQRO60306 1485 aaKnown RBP eCLIP9.22□□□□□ -0.93
AP001266.2-201ENST00000534505 POLA1P09884 1462 aaPredicted RBP9.22□□□□□ -0.93
AP001266.2-201ENST00000534505 FGD5Q6ZNL6 1462 aa9.22□□□□□ -0.93
AP001266.2-201ENST00000534505 IFT140Q96RY7 1462 aa9.22□□□□□ -0.93
AP001266.2-201ENST00000534505 FBLN2P98095 1184 aa9.2□□□□□ -0.94
AP001266.2-201ENST00000534505 ZNF608Q9ULD9 1512 aaPredicted RBP9.2□□□□□ -0.94
AP001266.2-201ENST00000534505 SYNJ1O43426 1573 aa9.17□□□□□ -0.94
AP001266.2-201ENST00000534505 CHMP7Q8WUX9 453 aaPredicted RBP9.17□□□□□ -0.94
AP001266.2-201ENST00000534505 TOP2BQ02880 1626 aa9.16□□□□□ -0.94
AP001266.2-201ENST00000534505 OSCARQ8IYS5 282 aa9.16□□□□□ -0.94
AP001266.2-201ENST00000534505 FAM9AQ8IZU1 332 aaPredicted RBP9.16□□□□□ -0.94
AP001266.2-201ENST00000534505 IGF1RP08069 1367 aa9.14□□□□□ -0.95
AP001266.2-201ENST00000534505 ABCA10Q8WWZ4 1543 aa9.14□□□□□ -0.95
AP001266.2-201ENST00000534505 GAPVD1Q14C86 1478 aa9.13□□□□□ -0.95
AP001266.2-201ENST00000534505 TARBP1Q13395 1621 aaKnown RBP9.13□□□□□ -0.95
AP001266.2-201ENST00000534505 CSRNP3Q8WYN3 585 aa9.12□□□□□ -0.95
AP001266.2-201ENST00000534505 KIF27Q86VH2 1401 aa9.12□□□□□ -0.95
AP001266.2-201ENST00000534505 BIVM-ERCC5R4GMW8 1640 aa9.11□□□□□ -0.95
AP001266.2-201ENST00000534505 DNAJC5Q9H3Z4 198 aa9.1□□□□□ -0.95
AP001266.2-201ENST00000534505 RUSC2Q8N2Y8 1516 aa9.1□□□□□ -0.95
AP001266.2-201ENST00000534505 GRIN2BQ13224 1484 aa9.09□□□□□ -0.95
AP001266.2-201ENST00000534505 CARMIL1Q5VZK9 1371 aa9.07□□□□□ -0.96
AP001266.2-201ENST00000534505 EHMT2Q96KQ7 1210 aa9.06□□□□□ -0.96
AP001266.2-201ENST00000534505 SNAPC4Q5SXM2 1469 aa9.04□□□□□ -0.96
AP001266.2-201ENST00000534505 FHAD1B1AJZ9 1412 aa9.03□□□□□ -0.96
AP001266.2-201ENST00000534505 EIF4G3O43432 1585 aaKnown RBP9.03□□□□□ -0.96
AP001266.2-201ENST00000534505 MAGI1Q96QZ7 1491 aaPredicted RBP9.02□□□□□ -0.97
AP001266.2-201ENST00000534505 JPH4Q96JJ6 628 aa9.01□□□□□ -0.97
AP001266.2-201ENST00000534505 UBTFP17480 764 aaKnown RBP9□□□□□ -0.97
AP001266.2-201ENST00000534505 SYNJ2O15056 1496 aa9□□□□□ -0.97
AP001266.2-201ENST00000534505 ERICH3Q5RHP9 1530 aa9□□□□□ -0.97
AP001266.2-201ENST00000534505 WDR97A6NE52 1622 aa8.99□□□□□ -0.97
AP001266.2-201ENST00000534505 ABCA5Q8WWZ7 1642 aa8.98□□□□□ -0.97
AP001266.2-201ENST00000534505 LOC105371045A0A1W2PR82 267 aa8.98□□□□□ -0.97
AP001266.2-201ENST00000534505 EEA1Q15075 1411 aa8.97□□□□□ -0.97
AP001266.2-201ENST00000534505 RANGAP1P46060 587 aaPredicted RBP8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms