RNA–Protein interactions for RNA: ENST00000532912.1

TRIM53BP-201, Transcript of tripartite motif containing 53B, pseudogene, humanhuman

BASIC

Gene TRIM53BP, Length 1,720 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM53BP-201ENST00000532912 NISCHQ9Y2I1 1504 aa17.69■□□□□ 0.42
TRIM53BP-201ENST00000532912 CCDC180Q9P1Z9 1646 aa15.15■□□□□ 0.02
TRIM53BP-201ENST00000532912 ZCCHC6Q5VYS8 1495 aaKnown RBP14.98□□□□□ -0.01
TRIM53BP-201ENST00000532912 SHROOM4Q9ULL8 1493 aa14.8□□□□□ -0.04
TRIM53BP-201ENST00000532912 AEBP2Q6ZN18 517 aaPredicted RBP14.71□□□□□ -0.05
TRIM53BP-201ENST00000532912 DCAF1Q9Y4B6 1507 aa14.61□□□□□ -0.07
TRIM53BP-201ENST00000532912 SUPT5HO00267 1087 aaKnown RBP14.44□□□□□ -0.1
TRIM53BP-201ENST00000532912 DCAF8L2P0C7V8 631 aa14.38□□□□□ -0.11
TRIM53BP-201ENST00000532912 MYO15BQ96JP2 1530 aa14.24□□□□□ -0.13
TRIM53BP-201ENST00000532912 CHIC1Q5VXU3 224 aa14.14□□□□□ -0.15
TRIM53BP-201ENST00000532912 ABCC9O60706 1549 aa14.12□□□□□ -0.15
TRIM53BP-201ENST00000532912 SCRIBQ14160 1630 aa14.05□□□□□ -0.16
TRIM53BP-201ENST00000532912 NACADO15069 1562 aa13.99□□□□□ -0.17
TRIM53BP-201ENST00000532912 POTEDQ86YR6 584 aa13.96□□□□□ -0.17
TRIM53BP-201ENST00000532912 RSF1Q96T23 1441 aaPredicted RBP13.94□□□□□ -0.18
TRIM53BP-201ENST00000532912 RB1CC1Q8TDY2 1594 aa13.8□□□□□ -0.2
TRIM53BP-201ENST00000532912 CECR2Q9BXF3 1484 aa13.76□□□□□ -0.21
TRIM53BP-201ENST00000532912 MROH2BQ7Z745 1585 aa13.72□□□□□ -0.21
TRIM53BP-201ENST00000532912 WIZO95785 1651 aa13.63□□□□□ -0.23
TRIM53BP-201ENST00000532912 LOC105371045A0A1W2PR82 267 aa13.62□□□□□ -0.23
TRIM53BP-201ENST00000532912 BAZ1AQ9NRL2 1556 aaPredicted RBP13.61□□□□□ -0.23
TRIM53BP-201ENST00000532912 UNC13AQ9UPW8 1703 aa13.58□□□□□ -0.24
TRIM53BP-201ENST00000532912 EIF4G1Q04637 1599 aaKnown RBP13.54□□□□□ -0.24
TRIM53BP-201ENST00000532912 HRCP23327 699 aa13.53□□□□□ -0.24
TRIM53BP-201ENST00000532912 TRIM41Q8WV44 630 aa13.51□□□□□ -0.25
TRIM53BP-201ENST00000532912 SMARCA4P51532 1647 aa13.5□□□□□ -0.25
TRIM53BP-201ENST00000532912 PCGF6Q9BYE7 350 aa13.49□□□□□ -0.25
TRIM53BP-201ENST00000532912 TOP2AP11388 1531 aaKnown RBP13.47□□□□□ -0.25
TRIM53BP-201ENST00000532912 BICRAQ9NZM4 1560 aa13.42□□□□□ -0.26
TRIM53BP-201ENST00000532912 SMARCA2P51531 1590 aa13.38□□□□□ -0.27
TRIM53BP-201ENST00000532912 CCDC88BA6NC98 1476 aa13.36□□□□□ -0.27
TRIM53BP-201ENST00000532912 TRIM26Q12899 539 aaPredicted RBP13.33□□□□□ -0.27
TRIM53BP-201ENST00000532912 FAM9AQ8IZU1 332 aaPredicted RBP13.32□□□□□ -0.28
TRIM53BP-201ENST00000532912 PEG3Q9GZU2 1588 aa13.32□□□□□ -0.28
TRIM53BP-201ENST00000532912 ABCC8Q09428 1581 aa13.26□□□□□ -0.29
TRIM53BP-201ENST00000532912 PABPN1Q86U42 306 aaKnown RBP eCLIP13.24□□□□□ -0.29
TRIM53BP-201ENST00000532912 PPARGC1BQ86YN6 1023 aaKnown RBP13.18□□□□□ -0.3
TRIM53BP-201ENST00000532912 ATAD2BQ9ULI0 1458 aa13.16□□□□□ -0.3
TRIM53BP-201ENST00000532912 EHMT2Q96KQ7 1210 aa13.12□□□□□ -0.31
TRIM53BP-201ENST00000532912 SOGA1O94964 1423 aa13.11□□□□□ -0.31
TRIM53BP-201ENST00000532912 EEA1Q15075 1411 aa13.11□□□□□ -0.31
TRIM53BP-201ENST00000532912 BAZ1BQ9UIG0 1483 aaKnown RBP13.07□□□□□ -0.32
TRIM53BP-201ENST00000532912 WRNQ14191 1432 aaPredicted RBP eCLIP13.07□□□□□ -0.32
TRIM53BP-201ENST00000532912 RUSC2Q8N2Y8 1516 aa13.06□□□□□ -0.32
TRIM53BP-201ENST00000532912 SYNJ1O43426 1573 aa13.04□□□□□ -0.32
TRIM53BP-201ENST00000532912 TNIKQ9UKE5 1360 aa13.04□□□□□ -0.32
TRIM53BP-201ENST00000532912 CEP162Q5TB80 1403 aa13.02□□□□□ -0.32
TRIM53BP-201ENST00000532912 ZEB1P37275 1124 aaPredicted RBP13.01□□□□□ -0.33
TRIM53BP-201ENST00000532912 CSRNP3Q8WYN3 585 aa13.01□□□□□ -0.33
TRIM53BP-201ENST00000532912 GOLGA3Q08378 1498 aa12.98□□□□□ -0.33
TRIM53BP-201ENST00000532912 KIF21BO75037 1637 aa12.96□□□□□ -0.33
TRIM53BP-201ENST00000532912 HMGXB3Q12766 1538 aa12.96□□□□□ -0.33
TRIM53BP-201ENST00000532912 NCAPD3P42695 1498 aa12.94□□□□□ -0.34
TRIM53BP-201ENST00000532912 TOP2BQ02880 1626 aa12.92□□□□□ -0.34
TRIM53BP-201ENST00000532912 CEP164Q9UPV0 1460 aa12.92□□□□□ -0.34
TRIM53BP-201ENST00000532912 BIVM-ERCC5R4GMW8 1640 aa12.9□□□□□ -0.34
TRIM53BP-201ENST00000532912 UBTFP17480 764 aaKnown RBP12.85□□□□□ -0.35
TRIM53BP-201ENST00000532912 RAPGEF2Q9Y4G8 1499 aa12.82□□□□□ -0.36
TRIM53BP-201ENST00000532912 CFTRP13569 1480 aa12.8□□□□□ -0.36
TRIM53BP-201ENST00000532912 CUX1P39880 1505 aa12.79□□□□□ -0.36
TRIM53BP-201ENST00000532912 CLIP1P30622 1438 aa12.78□□□□□ -0.36
TRIM53BP-201ENST00000532912 ERICH3Q5RHP9 1530 aa12.77□□□□□ -0.37
TRIM53BP-201ENST00000532912 PRXQ9BXM0 1461 aa12.77□□□□□ -0.37
TRIM53BP-201ENST00000532912 VPS8Q8N3P4 1428 aa12.76□□□□□ -0.37
TRIM53BP-201ENST00000532912 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.76□□□□□ -0.37
TRIM53BP-201ENST00000532912 PRDM2Q13029 1718 aa12.75□□□□□ -0.37
TRIM53BP-201ENST00000532912 SENP3Q9H4L4 574 aaPredicted RBP12.71□□□□□ -0.38
TRIM53BP-201ENST00000532912 CCER1Q8TC90 406 aaPredicted RBP12.7□□□□□ -0.38
TRIM53BP-201ENST00000532912 TTBK1Q5TCY1 1321 aaPredicted RBP12.7□□□□□ -0.38
TRIM53BP-201ENST00000532912 KIF27Q86VH2 1401 aa12.66□□□□□ -0.38
TRIM53BP-201ENST00000532912 ARAP1Q96P48 1450 aa12.66□□□□□ -0.38
TRIM53BP-201ENST00000532912 CADPSQ9ULU8 1353 aa12.63□□□□□ -0.39
TRIM53BP-201ENST00000532912 CC2D2AQ9P2K1 1620 aa12.61□□□□□ -0.39
TRIM53BP-201ENST00000532912 ARHGAP35Q9NRY4 1499 aa12.55□□□□□ -0.4
TRIM53BP-201ENST00000532912 IGF1RP08069 1367 aa12.55□□□□□ -0.4
TRIM53BP-201ENST00000532912 FGD5Q6ZNL6 1462 aa12.55□□□□□ -0.4
TRIM53BP-201ENST00000532912 CUX2O14529 1486 aa12.54□□□□□ -0.4
TRIM53BP-201ENST00000532912 APLP2Q06481 763 aa12.52□□□□□ -0.41
TRIM53BP-201ENST00000532912 RANGAP1P46060 587 aaPredicted RBP12.51□□□□□ -0.41
TRIM53BP-201ENST00000532912 FANCD2Q9BXW9 1451 aa12.5□□□□□ -0.41
TRIM53BP-201ENST00000532912 HNRNPUL2Q1KMD3 747 aaKnown RBP12.5□□□□□ -0.41
TRIM53BP-201ENST00000532912 RRBP1Q9P2E9 1410 aaKnown RBP12.49□□□□□ -0.41
TRIM53BP-201ENST00000532912 KANK4Q5T7N3 995 aaPredicted RBP12.48□□□□□ -0.41
TRIM53BP-201ENST00000532912 DNMBPQ6XZF7 1577 aa12.48□□□□□ -0.41
TRIM53BP-201ENST00000532912 PHF23Q9BUL5 403 aaPredicted RBP12.47□□□□□ -0.41
TRIM53BP-201ENST00000532912 CARMIL1Q5VZK9 1371 aa12.47□□□□□ -0.41
TRIM53BP-201ENST00000532912 MAP3K1Q13233 1512 aa12.45□□□□□ -0.42
TRIM53BP-201ENST00000532912 ABCA10Q8WWZ4 1543 aa12.45□□□□□ -0.42
TRIM53BP-201ENST00000532912 TOPBP1Q92547 1522 aa12.43□□□□□ -0.42
TRIM53BP-201ENST00000532912 DIEXFQ68CQ4 756 aaKnown RBP12.43□□□□□ -0.42
TRIM53BP-201ENST00000532912 POLA1P09884 1462 aaPredicted RBP12.43□□□□□ -0.42
TRIM53BP-201ENST00000532912 NESP48681 1621 aa12.42□□□□□ -0.42
TRIM53BP-201ENST00000532912 TIAM1Q13009 1591 aa12.4□□□□□ -0.42
TRIM53BP-201ENST00000532912 ZNF316A6NFI3 1004 aaPredicted RBP12.4□□□□□ -0.42
TRIM53BP-201ENST00000532912 RAD54L2Q9Y4B4 1467 aa12.4□□□□□ -0.42
TRIM53BP-201ENST00000532912 DHX57Q6P158 1386 aaKnown RBP12.4□□□□□ -0.42
TRIM53BP-201ENST00000532912 CLSPNQ9HAW4 1339 aa12.39□□□□□ -0.43
TRIM53BP-201ENST00000532912 WDR97A6NE52 1622 aa12.39□□□□□ -0.43
TRIM53BP-201ENST00000532912 LAMC3Q9Y6N6 1575 aa12.39□□□□□ -0.43
TRIM53BP-201ENST00000532912 CCNB3Q8WWL7 1395 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms