RNA–Protein interactions for RNA: ENST00000532040.1

PDE4B-217, Transcript of phosphodiesterase 4B, humanhuman

TSL 4

Gene PDE4B, Length 570 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4B-217ENST00000532040 AEBP2Q6ZN18 517 aaPredicted RBP17.16■□□□□ 0.34
PDE4B-217ENST00000532040 CHIC1Q5VXU3 224 aa16.12■□□□□ 0.17
PDE4B-217ENST00000532040 SENP3Q9H4L4 574 aaPredicted RBP14.69□□□□□ -0.06
PDE4B-217ENST00000532040 PHF23Q9BUL5 403 aaPredicted RBP14.48□□□□□ -0.09
PDE4B-217ENST00000532040 NISCHQ9Y2I1 1504 aa13.85□□□□□ -0.19
PDE4B-217ENST00000532040 FOXD1Q16676 465 aa13.7□□□□□ -0.22
PDE4B-217ENST00000532040 ABCC9O60706 1549 aa12.98□□□□□ -0.33
PDE4B-217ENST00000532040 MSH5O43196 834 aa12.92□□□□□ -0.34
PDE4B-217ENST00000532040 POTEDQ86YR6 584 aa12.92□□□□□ -0.34
PDE4B-217ENST00000532040 PLPPR3Q6T4P5 718 aa12.8□□□□□ -0.36
PDE4B-217ENST00000532040 PIAS4Q8N2W9 510 aaPredicted RBP12.75□□□□□ -0.37
PDE4B-217ENST00000532040 CCDC180Q9P1Z9 1646 aa12.69□□□□□ -0.38
PDE4B-217ENST00000532040 PPP6R1Q9UPN7 881 aa12.66□□□□□ -0.38
PDE4B-217ENST00000532040 ADRA2BP18089 450 aa12.61□□□□□ -0.39
PDE4B-217ENST00000532040 DNAJC5BQ9UF47 199 aa12.39□□□□□ -0.43
PDE4B-217ENST00000532040 RB1CC1Q8TDY2 1594 aa12.22□□□□□ -0.45
PDE4B-217ENST00000532040 UNC13AQ9UPW8 1703 aa12.07□□□□□ -0.48
PDE4B-217ENST00000532040 NACADO15069 1562 aa12.01□□□□□ -0.49
PDE4B-217ENST00000532040 PABPN1Q86U42 306 aaKnown RBP eCLIP11.99□□□□□ -0.49
PDE4B-217ENST00000532040 DCAF8L2P0C7V8 631 aa11.9□□□□□ -0.5
PDE4B-217ENST00000532040 BICRAQ9NZM4 1560 aa11.84□□□□□ -0.51
PDE4B-217ENST00000532040 CC2D2AQ9P2K1 1620 aa11.74□□□□□ -0.53
PDE4B-217ENST00000532040 CECR2Q9BXF3 1484 aa11.71□□□□□ -0.53
PDE4B-217ENST00000532040 MYO15BQ96JP2 1530 aa11.65□□□□□ -0.54
PDE4B-217ENST00000532040 DNAJC5Q9H3Z4 198 aa11.65□□□□□ -0.54
PDE4B-217ENST00000532040 MAPK8IP2Q13387 824 aaPredicted RBP11.64□□□□□ -0.55
PDE4B-217ENST00000532040 DMRT2Q9Y5R5 561 aa11.62□□□□□ -0.55
PDE4B-217ENST00000532040 EIF4G1Q04637 1599 aaKnown RBP11.6□□□□□ -0.55
PDE4B-217ENST00000532040 SHROOM4Q9ULL8 1493 aa11.6□□□□□ -0.55
PDE4B-217ENST00000532040 SCAF1Q9H7N4 1312 aaKnown RBP11.59□□□□□ -0.55
PDE4B-217ENST00000532040 SCRIBQ14160 1630 aa11.55□□□□□ -0.56
PDE4B-217ENST00000532040 ZCCHC6Q5VYS8 1495 aaKnown RBP11.4□□□□□ -0.58
PDE4B-217ENST00000532040 DCAF1Q9Y4B6 1507 aa11.39□□□□□ -0.59
PDE4B-217ENST00000532040 CUX2O14529 1486 aa11.31□□□□□ -0.6
PDE4B-217ENST00000532040 ERCC6Q03468 1493 aa11.26□□□□□ -0.61
PDE4B-217ENST00000532040 CACNB1Q02641 598 aaPredicted RBP11.2□□□□□ -0.62
PDE4B-217ENST00000532040 PPP4R3CPQ6ZMV5 832 aa11.19□□□□□ -0.62
PDE4B-217ENST00000532040 DCAF8L1A6NGE4 600 aa11.14□□□□□ -0.63
PDE4B-217ENST00000532040 HOXD11P31277 338 aaPredicted RBP11.12□□□□□ -0.63
PDE4B-217ENST00000532040 TRIM41Q8WV44 630 aa11.09□□□□□ -0.63
PDE4B-217ENST00000532040 THOC2Q8NI27 1593 aaKnown RBP11.04□□□□□ -0.64
PDE4B-217ENST00000532040 NESP48681 1621 aa11.04□□□□□ -0.64
PDE4B-217ENST00000532040 CNKSR2Q8WXI2 1034 aa11.03□□□□□ -0.64
PDE4B-217ENST00000532040 NCAPD3P42695 1498 aa11.01□□□□□ -0.65
PDE4B-217ENST00000532040 KIF21AQ7Z4S6 1674 aa11.01□□□□□ -0.65
PDE4B-217ENST00000532040 RNF39Q9H2S5 420 aa10.99□□□□□ -0.65
PDE4B-217ENST00000532040 RNF216Q9NWF9 866 aaPredicted RBP10.99□□□□□ -0.65
PDE4B-217ENST00000532040 SMARCA2P51531 1590 aa10.99□□□□□ -0.65
PDE4B-217ENST00000532040 ATAD2BQ9ULI0 1458 aa10.97□□□□□ -0.65
PDE4B-217ENST00000532040 HMGXB3Q12766 1538 aa10.97□□□□□ -0.65
PDE4B-217ENST00000532040 SMARCA4P51532 1647 aa10.95□□□□□ -0.66
PDE4B-217ENST00000532040 LAMC3Q9Y6N6 1575 aa10.92□□□□□ -0.66
PDE4B-217ENST00000532040 BAZ1BQ9UIG0 1483 aaKnown RBP10.89□□□□□ -0.67
PDE4B-217ENST00000532040 BAZ1AQ9NRL2 1556 aaPredicted RBP10.86□□□□□ -0.67
PDE4B-217ENST00000532040 C1QBPQ07021 282 aaKnown RBP10.84□□□□□ -0.67
PDE4B-217ENST00000532040 PDS5BQ9NTI5 1447 aa10.83□□□□□ -0.68
PDE4B-217ENST00000532040 PEG3Q9GZU2 1588 aa10.78□□□□□ -0.68
PDE4B-217ENST00000532040 MRC2Q9UBG0 1479 aa10.78□□□□□ -0.68
PDE4B-217ENST00000532040 WDR62O43379 1518 aa10.77□□□□□ -0.69
PDE4B-217ENST00000532040 NCBP3Q53F19 620 aaKnown RBP10.72□□□□□ -0.69
PDE4B-217ENST00000532040 RIMBP3CA6NJZ7 1639 aa10.71□□□□□ -0.69
PDE4B-217ENST00000532040 RIMBP3BA6NNM3 1639 aa10.71□□□□□ -0.69
PDE4B-217ENST00000532040 RIMBP3Q9UFD9 1639 aa10.71□□□□□ -0.69
PDE4B-217ENST00000532040 OSCARQ8IYS5 282 aa10.7□□□□□ -0.7
PDE4B-217ENST00000532040 CADPSQ9ULU8 1353 aa10.68□□□□□ -0.7
PDE4B-217ENST00000532040 MROH2BQ7Z745 1585 aa10.68□□□□□ -0.7
PDE4B-217ENST00000532040 CEP164Q9UPV0 1460 aa10.68□□□□□ -0.7
PDE4B-217ENST00000532040 WIZO95785 1651 aa10.62□□□□□ -0.71
PDE4B-217ENST00000532040 FANCD2Q9BXW9 1451 aa10.61□□□□□ -0.71
PDE4B-217ENST00000532040 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.59□□□□□ -0.71
PDE4B-217ENST00000532040 ARHGEF11O15085 1522 aa10.58□□□□□ -0.72
PDE4B-217ENST00000532040 PRDM2Q13029 1718 aa10.58□□□□□ -0.72
PDE4B-217ENST00000532040 TRHP20396 242 aaPredicted RBP10.55□□□□□ -0.72
PDE4B-217ENST00000532040 URB2Q14146 1524 aaKnown RBP10.54□□□□□ -0.72
PDE4B-217ENST00000532040 CHD1O14646 1710 aa10.53□□□□□ -0.72
PDE4B-217ENST00000532040 NPM3O75607 178 aaKnown RBP10.53□□□□□ -0.72
PDE4B-217ENST00000532040 CYB5RLQ6IPT4 315 aa10.5□□□□□ -0.73
PDE4B-217ENST00000532040 CFTRP13569 1480 aa10.49□□□□□ -0.73
PDE4B-217ENST00000532040 ZNF608Q9ULD9 1512 aaPredicted RBP10.48□□□□□ -0.73
PDE4B-217ENST00000532040 EIF4G3O43432 1585 aaKnown RBP10.48□□□□□ -0.73
PDE4B-217ENST00000532040 IFT140Q96RY7 1462 aa10.45□□□□□ -0.74
PDE4B-217ENST00000532040 ARAP1Q96P48 1450 aa10.44□□□□□ -0.74
PDE4B-217ENST00000532040 TOP2AP11388 1531 aaKnown RBP10.4□□□□□ -0.74
PDE4B-217ENST00000532040 FBLN2P98095 1184 aa10.37□□□□□ -0.75
PDE4B-217ENST00000532040 TOPBP1Q92547 1522 aa10.37□□□□□ -0.75
PDE4B-217ENST00000532040 RSF1Q96T23 1441 aaPredicted RBP10.35□□□□□ -0.75
PDE4B-217ENST00000532040 DNMBPQ6XZF7 1577 aa10.34□□□□□ -0.75
PDE4B-217ENST00000532040 TARBP1Q13395 1621 aaKnown RBP10.33□□□□□ -0.76
PDE4B-217ENST00000532040 U3KPZ7 1027 aaPredicted RBP10.33□□□□□ -0.76
PDE4B-217ENST00000532040 AQRO60306 1485 aaKnown RBP eCLIP10.32□□□□□ -0.76
PDE4B-217ENST00000532040 ABCC8Q09428 1581 aa10.31□□□□□ -0.76
PDE4B-217ENST00000532040 SYNJ1O43426 1573 aa10.28□□□□□ -0.76
PDE4B-217ENST00000532040 CLASP1Q7Z460 1538 aa10.28□□□□□ -0.76
PDE4B-217ENST00000532040 CCDC88BA6NC98 1476 aa10.25□□□□□ -0.77
PDE4B-217ENST00000532040 SNAPC4Q5SXM2 1469 aa10.24□□□□□ -0.77
PDE4B-217ENST00000532040 CAPN15O75808 1086 aa10.24□□□□□ -0.77
PDE4B-217ENST00000532040 POLA1P09884 1462 aaPredicted RBP10.23□□□□□ -0.77
PDE4B-217ENST00000532040 DSG3P32926 999 aa10.23□□□□□ -0.77
PDE4B-217ENST00000532040 SPINK5Q9NQ38 1064 aaPredicted RBP10.23□□□□□ -0.77
PDE4B-217ENST00000532040 PBRM1Q86U86 1689 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms