RNA–Protein interactions for RNA: ENST00000532028.1

PHF21A-217, Transcript of PHD finger protein 21A, humanhuman

TSL 3

Gene PHF21A, Length 451 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF21A-217ENST00000532028 NISCHQ9Y2I1 1504 aa21.89■■□□□ 1.09
PHF21A-217ENST00000532028 AEBP2Q6ZN18 517 aaPredicted RBP21.55■■□□□ 1.04
PHF21A-217ENST00000532028 CHIC1Q5VXU3 224 aa20.26■□□□□ 0.83
PHF21A-217ENST00000532028 CCDC180Q9P1Z9 1646 aa19.36■□□□□ 0.69
PHF21A-217ENST00000532028 ABCC9O60706 1549 aa18.52■□□□□ 0.56
PHF21A-217ENST00000532028 SENP3Q9H4L4 574 aaPredicted RBP18.39■□□□□ 0.53
PHF21A-217ENST00000532028 ZCCHC6Q5VYS8 1495 aaKnown RBP18.33■□□□□ 0.53
PHF21A-217ENST00000532028 PHF23Q9BUL5 403 aaPredicted RBP18.17■□□□□ 0.5
PHF21A-217ENST00000532028 DCAF8L2P0C7V8 631 aa18.13■□□□□ 0.49
PHF21A-217ENST00000532028 DCAF1Q9Y4B6 1507 aa18.12■□□□□ 0.49
PHF21A-217ENST00000532028 NACADO15069 1562 aa18.05■□□□□ 0.48
PHF21A-217ENST00000532028 MYO15BQ96JP2 1530 aa18.04■□□□□ 0.48
PHF21A-217ENST00000532028 RB1CC1Q8TDY2 1594 aa18■□□□□ 0.47
PHF21A-217ENST00000532028 SCRIBQ14160 1630 aa17.7■□□□□ 0.42
PHF21A-217ENST00000532028 UNC13AQ9UPW8 1703 aa17.67■□□□□ 0.42
PHF21A-217ENST00000532028 SHROOM4Q9ULL8 1493 aa17.56■□□□□ 0.4
PHF21A-217ENST00000532028 BICRAQ9NZM4 1560 aa17.41■□□□□ 0.38
PHF21A-217ENST00000532028 PABPN1Q86U42 306 aaKnown RBP eCLIP17.33■□□□□ 0.36
PHF21A-217ENST00000532028 FOXD1Q16676 465 aa17.2■□□□□ 0.34
PHF21A-217ENST00000532028 CECR2Q9BXF3 1484 aa17■□□□□ 0.31
PHF21A-217ENST00000532028 BAZ1AQ9NRL2 1556 aaPredicted RBP16.97■□□□□ 0.31
PHF21A-217ENST00000532028 SMARCA4P51532 1647 aa16.95■□□□□ 0.3
PHF21A-217ENST00000532028 EIF4G1Q04637 1599 aaKnown RBP16.94■□□□□ 0.3
PHF21A-217ENST00000532028 MROH2BQ7Z745 1585 aa16.89■□□□□ 0.29
PHF21A-217ENST00000532028 RSF1Q96T23 1441 aaPredicted RBP16.8■□□□□ 0.28
PHF21A-217ENST00000532028 CC2D2AQ9P2K1 1620 aa16.78■□□□□ 0.28
PHF21A-217ENST00000532028 WIZO95785 1651 aa16.77■□□□□ 0.28
PHF21A-217ENST00000532028 PEG3Q9GZU2 1588 aa16.74■□□□□ 0.27
PHF21A-217ENST00000532028 SMARCA2P51531 1590 aa16.73■□□□□ 0.27
PHF21A-217ENST00000532028 SUPT5HO00267 1087 aaKnown RBP16.71■□□□□ 0.27
PHF21A-217ENST00000532028 ATAD2BQ9ULI0 1458 aa16.7■□□□□ 0.26
PHF21A-217ENST00000532028 BAZ1BQ9UIG0 1483 aaKnown RBP16.62■□□□□ 0.25
PHF21A-217ENST00000532028 HMGXB3Q12766 1538 aa16.61■□□□□ 0.25
PHF21A-217ENST00000532028 NCAPD3P42695 1498 aa16.61■□□□□ 0.25
PHF21A-217ENST00000532028 TOP2AP11388 1531 aaKnown RBP16.6■□□□□ 0.25
PHF21A-217ENST00000532028 DNAJC5BQ9UF47 199 aa16.55■□□□□ 0.24
PHF21A-217ENST00000532028 CCDC88BA6NC98 1476 aa16.36■□□□□ 0.21
PHF21A-217ENST00000532028 PRDM2Q13029 1718 aa16.2■□□□□ 0.18
PHF21A-217ENST00000532028 LAMC3Q9Y6N6 1575 aa16.17■□□□□ 0.18
PHF21A-217ENST00000532028 CADPSQ9ULU8 1353 aa16.15■□□□□ 0.18
PHF21A-217ENST00000532028 CFTRP13569 1480 aa16.15■□□□□ 0.18
PHF21A-217ENST00000532028 MSH5O43196 834 aa16.14■□□□□ 0.17
PHF21A-217ENST00000532028 NESP48681 1621 aa16.13■□□□□ 0.17
PHF21A-217ENST00000532028 POTEDQ86YR6 584 aa16.11■□□□□ 0.17
PHF21A-217ENST00000532028 PLPPR3Q6T4P5 718 aa16.1■□□□□ 0.17
PHF21A-217ENST00000532028 KIF21AQ7Z4S6 1674 aa16.03■□□□□ 0.16
PHF21A-217ENST00000532028 PIAS4Q8N2W9 510 aaPredicted RBP16.03■□□□□ 0.16
PHF21A-217ENST00000532028 PDS5BQ9NTI5 1447 aa16.02■□□□□ 0.15
PHF21A-217ENST00000532028 FANCD2Q9BXW9 1451 aa16■□□□□ 0.15
PHF21A-217ENST00000532028 CEP164Q9UPV0 1460 aa15.96■□□□□ 0.14
PHF21A-217ENST00000532028 PPP6R1Q9UPN7 881 aa15.95■□□□□ 0.14
PHF21A-217ENST00000532028 ERCC6Q03468 1493 aa15.95■□□□□ 0.14
PHF21A-217ENST00000532028 ABCC8Q09428 1581 aa15.93■□□□□ 0.14
PHF21A-217ENST00000532028 ADRA2BP18089 450 aa15.9■□□□□ 0.14
PHF21A-217ENST00000532028 WRNQ14191 1432 aaPredicted RBP eCLIP15.86■□□□□ 0.13
PHF21A-217ENST00000532028 MRC2Q9UBG0 1479 aa15.84■□□□□ 0.13
PHF21A-217ENST00000532028 THOC2Q8NI27 1593 aaKnown RBP15.84■□□□□ 0.13
PHF21A-217ENST00000532028 SYNJ1O43426 1573 aa15.83■□□□□ 0.13
PHF21A-217ENST00000532028 DNMBPQ6XZF7 1577 aa15.83■□□□□ 0.13
PHF21A-217ENST00000532028 BIVM-ERCC5R4GMW8 1640 aa15.83■□□□□ 0.13
PHF21A-217ENST00000532028 CUX1P39880 1505 aa15.82■□□□□ 0.12
PHF21A-217ENST00000532028 URB2Q14146 1524 aaKnown RBP15.82■□□□□ 0.12
PHF21A-217ENST00000532028 TOP2BQ02880 1626 aa15.81■□□□□ 0.12
PHF21A-217ENST00000532028 TOPBP1Q92547 1522 aa15.8■□□□□ 0.12
PHF21A-217ENST00000532028 WDR62O43379 1518 aa15.78■□□□□ 0.12
PHF21A-217ENST00000532028 TRIM41Q8WV44 630 aa15.75■□□□□ 0.11
PHF21A-217ENST00000532028 FGD5Q6ZNL6 1462 aa15.71■□□□□ 0.11
PHF21A-217ENST00000532028 POLA1P09884 1462 aaPredicted RBP15.69■□□□□ 0.1
PHF21A-217ENST00000532028 WDR97A6NE52 1622 aa15.62■□□□□ 0.09
PHF21A-217ENST00000532028 SOGA1O94964 1423 aa15.61■□□□□ 0.09
PHF21A-217ENST00000532028 CUX2O14529 1486 aa15.61■□□□□ 0.09
PHF21A-217ENST00000532028 RAD54L2Q9Y4B4 1467 aa15.61■□□□□ 0.09
PHF21A-217ENST00000532028 TARBP1Q13395 1621 aaKnown RBP15.6■□□□□ 0.09
PHF21A-217ENST00000532028 IFT140Q96RY7 1462 aa15.59■□□□□ 0.09
PHF21A-217ENST00000532028 ABCA10Q8WWZ4 1543 aa15.57■□□□□ 0.08
PHF21A-217ENST00000532028 ABCA5Q8WWZ7 1642 aa15.51■□□□□ 0.07
PHF21A-217ENST00000532028 EIF4G3O43432 1585 aaKnown RBP15.5■□□□□ 0.07
PHF21A-217ENST00000532028 KIF27Q86VH2 1401 aa15.5■□□□□ 0.07
PHF21A-217ENST00000532028 PBRM1Q86U86 1689 aa15.49■□□□□ 0.07
PHF21A-217ENST00000532028 ZNF608Q9ULD9 1512 aaPredicted RBP15.48■□□□□ 0.07
PHF21A-217ENST00000532028 RUSC2Q8N2Y8 1516 aa15.48■□□□□ 0.07
PHF21A-217ENST00000532028 TDRD9Q8NDG6 1382 aaKnown RBP15.47■□□□□ 0.07
PHF21A-217ENST00000532028 EEA1Q15075 1411 aa15.46■□□□□ 0.07
PHF21A-217ENST00000532028 GAPVD1Q14C86 1478 aa15.45■□□□□ 0.06
PHF21A-217ENST00000532028 FAM9AQ8IZU1 332 aaPredicted RBP15.44■□□□□ 0.06
PHF21A-217ENST00000532028 AQRO60306 1485 aaKnown RBP eCLIP15.44■□□□□ 0.062e-6■■■□□ 15.2
PHF21A-217ENST00000532028 ERICH3Q5RHP9 1530 aa15.4■□□□□ 0.06
PHF21A-217ENST00000532028 GRIN2BQ13224 1484 aa15.4■□□□□ 0.06
PHF21A-217ENST00000532028 CUL7Q14999 1698 aa15.38■□□□□ 0.05
PHF21A-217ENST00000532028 CSRNP3Q8WYN3 585 aa15.35■□□□□ 0.05
PHF21A-217ENST00000532028 IGF1RP08069 1367 aa15.35■□□□□ 0.05
PHF21A-217ENST00000532028 SNAPC4Q5SXM2 1469 aa15.34■□□□□ 0.05
PHF21A-217ENST00000532028 ADAMTS12P58397 1594 aa15.34■□□□□ 0.05
PHF21A-217ENST00000532028 MAGI1Q96QZ7 1491 aaPredicted RBP15.32■□□□□ 0.04
PHF21A-217ENST00000532028 KIF21BO75037 1637 aa15.32■□□□□ 0.04
PHF21A-217ENST00000532028 PRXQ9BXM0 1461 aa15.28■□□□□ 0.04
PHF21A-217ENST00000532028 CARMIL1Q5VZK9 1371 aa15.28■□□□□ 0.04
PHF21A-217ENST00000532028 FHAD1B1AJZ9 1412 aa15.27■□□□□ 0.04
PHF21A-217ENST00000532028 RAPGEF2Q9Y4G8 1499 aa15.26■□□□□ 0.03
PHF21A-217ENST00000532028 CHD1O14646 1710 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms