RNA–Protein interactions for RNA: ENST00000531883.5

RNPC3-206, Transcript of RNA binding region (RNP1, RRM) containing 3, humanhuman

TSL 2

Gene RNPC3, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNPC3-206ENST00000531883 AEBP2Q6ZN18 517 aaPredicted RBP26.41■■□□□ 1.82
RNPC3-206ENST00000531883 CHIC1Q5VXU3 224 aa24.76■■□□□ 1.55
RNPC3-206ENST00000531883 NISCHQ9Y2I1 1504 aa24.35■■□□□ 1.49
RNPC3-206ENST00000531883 SENP3Q9H4L4 574 aaPredicted RBP22.43■■□□□ 1.18
RNPC3-206ENST00000531883 PHF23Q9BUL5 403 aaPredicted RBP22.14■■□□□ 1.13
RNPC3-206ENST00000531883 CCDC180Q9P1Z9 1646 aa21.44■■□□□ 1.02
RNPC3-206ENST00000531883 FOXD1Q16676 465 aa21.03■□□□□ 0.96
RNPC3-206ENST00000531883 ABCC9O60706 1549 aa20.53■□□□□ 0.88
RNPC3-206ENST00000531883 ZCCHC6Q5VYS8 1495 aaKnown RBP20.39■□□□□ 0.85
RNPC3-206ENST00000531883 DCAF1Q9Y4B6 1507 aa20.15■□□□□ 0.82
RNPC3-206ENST00000531883 DCAF8L2P0C7V8 631 aa20.14■□□□□ 0.81
RNPC3-206ENST00000531883 MYO15BQ96JP2 1530 aa20.04■□□□□ 0.8
RNPC3-206ENST00000531883 NACADO15069 1562 aa20.02■□□□□ 0.8
RNPC3-206ENST00000531883 RB1CC1Q8TDY2 1594 aa19.95■□□□□ 0.78
RNPC3-206ENST00000531883 POTEDQ86YR6 584 aa19.73■□□□□ 0.75
RNPC3-206ENST00000531883 MSH5O43196 834 aa19.67■□□□□ 0.74
RNPC3-206ENST00000531883 SCRIBQ14160 1630 aa19.63■□□□□ 0.73
RNPC3-206ENST00000531883 PLPPR3Q6T4P5 718 aa19.6■□□□□ 0.73
RNPC3-206ENST00000531883 PIAS4Q8N2W9 510 aaPredicted RBP19.56■□□□□ 0.72
RNPC3-206ENST00000531883 SHROOM4Q9ULL8 1493 aa19.55■□□□□ 0.72
RNPC3-206ENST00000531883 UNC13AQ9UPW8 1703 aa19.55■□□□□ 0.72
RNPC3-206ENST00000531883 PPP6R1Q9UPN7 881 aa19.5■□□□□ 0.71
RNPC3-206ENST00000531883 ADRA2BP18089 450 aa19.4■□□□□ 0.7
RNPC3-206ENST00000531883 BICRAQ9NZM4 1560 aa19.35■□□□□ 0.69
RNPC3-206ENST00000531883 PABPN1Q86U42 306 aaKnown RBP eCLIP19.25■□□□□ 0.67
RNPC3-206ENST00000531883 CECR2Q9BXF3 1484 aa18.93■□□□□ 0.62
RNPC3-206ENST00000531883 BAZ1AQ9NRL2 1556 aaPredicted RBP18.84■□□□□ 0.61
RNPC3-206ENST00000531883 SMARCA4P51532 1647 aa18.82■□□□□ 0.6
RNPC3-206ENST00000531883 EIF4G1Q04637 1599 aaKnown RBP18.79■□□□□ 0.6
RNPC3-206ENST00000531883 MROH2BQ7Z745 1585 aa18.79■□□□□ 0.6
RNPC3-206ENST00000531883 RSF1Q96T23 1441 aaPredicted RBP18.74■□□□□ 0.59
RNPC3-206ENST00000531883 WIZO95785 1651 aa18.63■□□□□ 0.57
RNPC3-206ENST00000531883 SUPT5HO00267 1087 aaKnown RBP18.62■□□□□ 0.57
RNPC3-206ENST00000531883 CC2D2AQ9P2K1 1620 aa18.6■□□□□ 0.57
RNPC3-206ENST00000531883 PEG3Q9GZU2 1588 aa18.59■□□□□ 0.57
RNPC3-206ENST00000531883 SMARCA2P51531 1590 aa18.56■□□□□ 0.56
RNPC3-206ENST00000531883 ATAD2BQ9ULI0 1458 aa18.56■□□□□ 0.56
RNPC3-206ENST00000531883 NCAPD3P42695 1498 aa18.46■□□□□ 0.55
RNPC3-206ENST00000531883 BAZ1BQ9UIG0 1483 aaKnown RBP18.45■□□□□ 0.54
RNPC3-206ENST00000531883 TOP2AP11388 1531 aaKnown RBP18.44■□□□□ 0.54
RNPC3-206ENST00000531883 HMGXB3Q12766 1538 aa18.44■□□□□ 0.54
RNPC3-206ENST00000531883 DNAJC5BQ9UF47 199 aa18.39■□□□□ 0.53
RNPC3-206ENST00000531883 CCDC88BA6NC98 1476 aa18.21■□□□□ 0.51
RNPC3-206ENST00000531883 CFTRP13569 1480 aa17.95■□□□□ 0.46
RNPC3-206ENST00000531883 CADPSQ9ULU8 1353 aa17.95■□□□□ 0.46
RNPC3-206ENST00000531883 LAMC3Q9Y6N6 1575 aa17.92■□□□□ 0.46
RNPC3-206ENST00000531883 NESP48681 1621 aa17.92■□□□□ 0.46
RNPC3-206ENST00000531883 MAPK8IP2Q13387 824 aaPredicted RBP17.91■□□□□ 0.46
RNPC3-206ENST00000531883 PRDM2Q13029 1718 aa17.9■□□□□ 0.46
RNPC3-206ENST00000531883 DMRT2Q9Y5R5 561 aa17.78■□□□□ 0.44
RNPC3-206ENST00000531883 FANCD2Q9BXW9 1451 aa17.76■□□□□ 0.43
RNPC3-206ENST00000531883 PDS5BQ9NTI5 1447 aa17.76■□□□□ 0.43
RNPC3-206ENST00000531883 KIF21AQ7Z4S6 1674 aa17.74■□□□□ 0.43
RNPC3-206ENST00000531883 ABCC8Q09428 1581 aa17.73■□□□□ 0.43
RNPC3-206ENST00000531883 CEP164Q9UPV0 1460 aa17.7■□□□□ 0.42
RNPC3-206ENST00000531883 WRNQ14191 1432 aaPredicted RBP eCLIP17.64■□□□□ 0.42
RNPC3-206ENST00000531883 ERCC6Q03468 1493 aa17.64■□□□□ 0.41
RNPC3-206ENST00000531883 SYNJ1O43426 1573 aa17.62■□□□□ 0.41
RNPC3-206ENST00000531883 CUX1P39880 1505 aa17.6■□□□□ 0.41
RNPC3-206ENST00000531883 BIVM-ERCC5R4GMW8 1640 aa17.58■□□□□ 0.41
RNPC3-206ENST00000531883 TOP2BQ02880 1626 aa17.58■□□□□ 0.4
RNPC3-206ENST00000531883 URB2Q14146 1524 aaKnown RBP17.57■□□□□ 0.4
RNPC3-206ENST00000531883 MRC2Q9UBG0 1479 aa17.57■□□□□ 0.4
RNPC3-206ENST00000531883 SCAF1Q9H7N4 1312 aaKnown RBP17.57■□□□□ 0.4
RNPC3-206ENST00000531883 DNMBPQ6XZF7 1577 aa17.57■□□□□ 0.4
RNPC3-206ENST00000531883 THOC2Q8NI27 1593 aaKnown RBP17.55■□□□□ 0.4
RNPC3-206ENST00000531883 TOPBP1Q92547 1522 aa17.54■□□□□ 0.4
RNPC3-206ENST00000531883 TRIM41Q8WV44 630 aa17.54■□□□□ 0.4
RNPC3-206ENST00000531883 WDR62O43379 1518 aa17.51■□□□□ 0.39
RNPC3-206ENST00000531883 FGD5Q6ZNL6 1462 aa17.46■□□□□ 0.39
RNPC3-206ENST00000531883 POLA1P09884 1462 aaPredicted RBP17.44■□□□□ 0.38
RNPC3-206ENST00000531883 RAD54L2Q9Y4B4 1467 aa17.36■□□□□ 0.37
RNPC3-206ENST00000531883 CUX2O14529 1486 aa17.35■□□□□ 0.37
RNPC3-206ENST00000531883 SOGA1O94964 1423 aa17.34■□□□□ 0.37
RNPC3-206ENST00000531883 WDR97A6NE52 1622 aa17.32■□□□□ 0.36
RNPC3-206ENST00000531883 TARBP1Q13395 1621 aaKnown RBP17.32■□□□□ 0.36
RNPC3-206ENST00000531883 IFT140Q96RY7 1462 aa17.3■□□□□ 0.36
RNPC3-206ENST00000531883 ABCA10Q8WWZ4 1543 aa17.29■□□□□ 0.36
RNPC3-206ENST00000531883 RUSC2Q8N2Y8 1516 aa17.26■□□□□ 0.35
RNPC3-206ENST00000531883 KIF27Q86VH2 1401 aa17.23■□□□□ 0.35
RNPC3-206ENST00000531883 EEA1Q15075 1411 aa17.21■□□□□ 0.35
RNPC3-206ENST00000531883 ABCA5Q8WWZ7 1642 aa17.21■□□□□ 0.35
RNPC3-206ENST00000531883 FAM9AQ8IZU1 332 aaPredicted RBP17.21■□□□□ 0.35
RNPC3-206ENST00000531883 TDRD9Q8NDG6 1382 aaKnown RBP17.2■□□□□ 0.34
RNPC3-206ENST00000531883 PPP4R3CPQ6ZMV5 832 aa17.2■□□□□ 0.34
RNPC3-206ENST00000531883 ZNF608Q9ULD9 1512 aaPredicted RBP17.2■□□□□ 0.34
RNPC3-206ENST00000531883 EIF4G3O43432 1585 aaKnown RBP17.18■□□□□ 0.34
RNPC3-206ENST00000531883 GAPVD1Q14C86 1478 aa17.17■□□□□ 0.34
RNPC3-206ENST00000531883 AQRO60306 1485 aaKnown RBP eCLIP17.16■□□□□ 0.34
RNPC3-206ENST00000531883 PBRM1Q86U86 1689 aa17.14■□□□□ 0.33
RNPC3-206ENST00000531883 CSRNP3Q8WYN3 585 aa17.11■□□□□ 0.33
RNPC3-206ENST00000531883 ERICH3Q5RHP9 1530 aa17.1■□□□□ 0.33
RNPC3-206ENST00000531883 IGF1RP08069 1367 aa17.09■□□□□ 0.33
RNPC3-206ENST00000531883 GRIN2BQ13224 1484 aa17.09■□□□□ 0.33
RNPC3-206ENST00000531883 DCAF8L1A6NGE4 600 aa17.06■□□□□ 0.32
RNPC3-206ENST00000531883 CACNB1Q02641 598 aaPredicted RBP17.06■□□□□ 0.32
RNPC3-206ENST00000531883 CUL7Q14999 1698 aa17.06■□□□□ 0.32
RNPC3-206ENST00000531883 KIF21BO75037 1637 aa17.03■□□□□ 0.32
RNPC3-206ENST00000531883 HOXD11P31277 338 aaPredicted RBP17.03■□□□□ 0.32
RNPC3-206ENST00000531883 PRXQ9BXM0 1461 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms