RNA–Protein interactions for RNA: ENST00000530535.5

USP35-206, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 2

Gene USP35, Length 2,125 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-206ENST00000530535 NISCHQ9Y2I1 1504 aa33.62■■■□□ 2.97
USP35-206ENST00000530535 CCDC180Q9P1Z9 1646 aa29.33■■■□□ 2.29
USP35-206ENST00000530535 ZCCHC6Q5VYS8 1495 aaKnown RBP28.2■■■□□ 2.1
USP35-206ENST00000530535 ABCC9O60706 1549 aa27.9■■■□□ 2.06
USP35-206ENST00000530535 DCAF8L2P0C7V8 631 aa27.88■■■□□ 2.05
USP35-206ENST00000530535 DCAF1Q9Y4B6 1507 aa27.78■■■□□ 2.04
USP35-206ENST00000530535 MYO15BQ96JP2 1530 aa27.5■■□□□ 1.99
USP35-206ENST00000530535 SHROOM4Q9ULL8 1493 aa27.43■■□□□ 1.98
USP35-206ENST00000530535 NACADO15069 1562 aa27.37■■□□□ 1.97
USP35-206ENST00000530535 RB1CC1Q8TDY2 1594 aa27.17■■□□□ 1.94
USP35-206ENST00000530535 SCRIBQ14160 1630 aa26.98■■□□□ 1.91
USP35-206ENST00000530535 SUPT5HO00267 1087 aaKnown RBP26.74■■□□□ 1.87
USP35-206ENST00000530535 UNC13AQ9UPW8 1703 aa26.58■■□□□ 1.85
USP35-206ENST00000530535 BICRAQ9NZM4 1560 aa26.35■■□□□ 1.81
USP35-206ENST00000530535 PABPN1Q86U42 306 aaKnown RBP eCLIP26.32■■□□□ 1.8
USP35-206ENST00000530535 CHIC1Q5VXU3 224 aa26.18■■□□□ 1.78
USP35-206ENST00000530535 CECR2Q9BXF3 1484 aa26.14■■□□□ 1.78
USP35-206ENST00000530535 RSF1Q96T23 1441 aaPredicted RBP26.05■■□□□ 1.76
USP35-206ENST00000530535 MROH2BQ7Z745 1585 aa25.97■■□□□ 1.75
USP35-206ENST00000530535 BAZ1AQ9NRL2 1556 aaPredicted RBP25.96■■□□□ 1.75
USP35-206ENST00000530535 SMARCA4P51532 1647 aa25.85■■□□□ 1.73
USP35-206ENST00000530535 WIZO95785 1651 aa25.74■■□□□ 1.71
USP35-206ENST00000530535 HRCP23327 699 aa25.62■■□□□ 1.69
USP35-206ENST00000530535 EIF4G1Q04637 1599 aaKnown RBP25.57■■□□□ 1.68
USP35-206ENST00000530535 PEG3Q9GZU2 1588 aa25.54■■□□□ 1.68
USP35-206ENST00000530535 ATAD2BQ9ULI0 1458 aa25.48■■□□□ 1.67
USP35-206ENST00000530535 TOP2AP11388 1531 aaKnown RBP25.46■■□□□ 1.67
USP35-206ENST00000530535 SMARCA2P51531 1590 aa25.45■■□□□ 1.66
USP35-206ENST00000530535 PCGF6Q9BYE7 350 aa25.42■■□□□ 1.66
USP35-206ENST00000530535 LOC105371045A0A1W2PR82 267 aa25.35■■□□□ 1.65
USP35-206ENST00000530535 BAZ1BQ9UIG0 1483 aaKnown RBP25.33■■□□□ 1.64
USP35-206ENST00000530535 NCAPD3P42695 1498 aa25.29■■□□□ 1.64
USP35-206ENST00000530535 CCDC88BA6NC98 1476 aa25.23■■□□□ 1.63
USP35-206ENST00000530535 CC2D2AQ9P2K1 1620 aa25.23■■□□□ 1.63
USP35-206ENST00000530535 HMGXB3Q12766 1538 aa25.21■■□□□ 1.63
USP35-206ENST00000530535 PPARGC1BQ86YN6 1023 aaKnown RBP25.01■■□□□ 1.59
USP35-206ENST00000530535 TRIM26Q12899 539 aaPredicted RBP24.97■■□□□ 1.59
USP35-206ENST00000530535 TRIM41Q8WV44 630 aa24.92■■□□□ 1.58
USP35-206ENST00000530535 DNAJC5BQ9UF47 199 aa24.76■■□□□ 1.55
USP35-206ENST00000530535 CFTRP13569 1480 aa24.69■■□□□ 1.54
USP35-206ENST00000530535 FAM9AQ8IZU1 332 aaPredicted RBP24.67■■□□□ 1.54
USP35-206ENST00000530535 ABCC8Q09428 1581 aa24.65■■□□□ 1.54
USP35-206ENST00000530535 CADPSQ9ULU8 1353 aa24.65■■□□□ 1.54
USP35-206ENST00000530535 WRNQ14191 1432 aaPredicted RBP eCLIP24.52■■□□□ 1.52
USP35-206ENST00000530535 PRDM2Q13029 1718 aa24.49■■□□□ 1.51
USP35-206ENST00000530535 ZEB1P37275 1124 aaPredicted RBP24.47■■□□□ 1.51
USP35-206ENST00000530535 NESP48681 1621 aa24.45■■□□□ 1.5
USP35-206ENST00000530535 LAMC3Q9Y6N6 1575 aa24.43■■□□□ 1.5
USP35-206ENST00000530535 EHMT2Q96KQ7 1210 aa24.4■■□□□ 1.5
USP35-206ENST00000530535 SYNJ1O43426 1573 aa24.39■■□□□ 1.5
USP35-206ENST00000530535 FANCD2Q9BXW9 1451 aa24.36■■□□□ 1.49
USP35-206ENST00000530535 TOP2BQ02880 1626 aa24.31■■□□□ 1.48
USP35-206ENST00000530535 CUX1P39880 1505 aa24.28■■□□□ 1.48
USP35-206ENST00000530535 PDS5BQ9NTI5 1447 aa24.28■■□□□ 1.48
USP35-206ENST00000530535 BIVM-ERCC5R4GMW8 1640 aa24.27■■□□□ 1.48
USP35-206ENST00000530535 CEP164Q9UPV0 1460 aa24.21■■□□□ 1.47
USP35-206ENST00000530535 SOGA1O94964 1423 aa24.18■■□□□ 1.46
USP35-206ENST00000530535 RUSC2Q8N2Y8 1516 aa24.12■■□□□ 1.45
USP35-206ENST00000530535 KIF21AQ7Z4S6 1674 aa24.12■■□□□ 1.45
USP35-206ENST00000530535 EEA1Q15075 1411 aa24.1■■□□□ 1.45
USP35-206ENST00000530535 DNMBPQ6XZF7 1577 aa24.1■■□□□ 1.45
USP35-206ENST00000530535 TOPBP1Q92547 1522 aa24.07■■□□□ 1.44
USP35-206ENST00000530535 URB2Q14146 1524 aaKnown RBP24.05■■□□□ 1.44
USP35-206ENST00000530535 FGD5Q6ZNL6 1462 aa24.04■■□□□ 1.44
USP35-206ENST00000530535 CSRNP3Q8WYN3 585 aa24.02■■□□□ 1.44
USP35-206ENST00000530535 CEP162Q5TB80 1403 aa24■■□□□ 1.43
USP35-206ENST00000530535 TNIKQ9UKE5 1360 aa23.97■■□□□ 1.43
USP35-206ENST00000530535 POLA1P09884 1462 aaPredicted RBP23.95■■□□□ 1.42
USP35-206ENST00000530535 MRC2Q9UBG0 1479 aa23.95■■□□□ 1.42
USP35-206ENST00000530535 ERCC6Q03468 1493 aa23.94■■□□□ 1.42
USP35-206ENST00000530535 KIF27Q86VH2 1401 aa23.92■■□□□ 1.42
USP35-206ENST00000530535 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.9■■□□□ 1.42
USP35-206ENST00000530535 RAD54L2Q9Y4B4 1467 aa23.88■■□□□ 1.41
USP35-206ENST00000530535 CUX2O14529 1486 aa23.87■■□□□ 1.41
USP35-206ENST00000530535 ABCA10Q8WWZ4 1543 aa23.83■■□□□ 1.41
USP35-206ENST00000530535 CCER1Q8TC90 406 aaPredicted RBP23.81■■□□□ 1.4
USP35-206ENST00000530535 WDR62O43379 1518 aa23.81■■□□□ 1.4
USP35-206ENST00000530535 GOLGA3Q08378 1498 aa23.81■■□□□ 1.4
USP35-206ENST00000530535 KIF21BO75037 1637 aa23.76■■□□□ 1.39
USP35-206ENST00000530535 THOC2Q8NI27 1593 aaKnown RBP23.75■■□□□ 1.39
USP35-206ENST00000530535 IGF1RP08069 1367 aa23.73■■□□□ 1.39
USP35-206ENST00000530535 WDR97A6NE52 1622 aa23.71■■□□□ 1.39
USP35-206ENST00000530535 PRXQ9BXM0 1461 aa23.71■■□□□ 1.39
USP35-206ENST00000530535 UBTFP17480 764 aaKnown RBP23.71■■□□□ 1.39
USP35-206ENST00000530535 TARBP1Q13395 1621 aaKnown RBP23.71■■□□□ 1.39
USP35-206ENST00000530535 RAPGEF2Q9Y4G8 1499 aa23.69■■□□□ 1.38
USP35-206ENST00000530535 TDRD9Q8NDG6 1382 aaKnown RBP23.68■■□□□ 1.38
USP35-206ENST00000530535 TTBK1Q5TCY1 1321 aaPredicted RBP23.68■■□□□ 1.38
USP35-206ENST00000530535 SCAF1Q9H7N4 1312 aaKnown RBP23.68■■□□□ 1.38
USP35-206ENST00000530535 IFT140Q96RY7 1462 aa23.64■■□□□ 1.37
USP35-206ENST00000530535 ERICH3Q5RHP9 1530 aa23.64■■□□□ 1.37
USP35-206ENST00000530535 GAPVD1Q14C86 1478 aa23.62■■□□□ 1.37
USP35-206ENST00000530535 ABCA5Q8WWZ7 1642 aa23.62■■□□□ 1.37
USP35-206ENST00000530535 CARMIL1Q5VZK9 1371 aa23.61■■□□□ 1.37
USP35-206ENST00000530535 AQRO60306 1485 aaKnown RBP eCLIP23.55■■□□□ 1.366e-7■■■■■ 32.3
USP35-206ENST00000530535 ZNF608Q9ULD9 1512 aaPredicted RBP23.52■■□□□ 1.36
USP35-206ENST00000530535 CLIP1P30622 1438 aa23.51■■□□□ 1.35
USP35-206ENST00000530535 CUL7Q14999 1698 aa23.5■■□□□ 1.35
USP35-206ENST00000530535 VPS8Q8N3P4 1428 aa23.47■■□□□ 1.35
USP35-206ENST00000530535 DIEXFQ68CQ4 756 aaKnown RBP23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms