RNA–Protein interactions for RNA: ENST00000530455.5

C8orf33-204, Transcript of chromosome 8 open reading frame 33, humanhuman

TSL 1 (best)

Gene C8orf33, Length 2,676 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C8orf33-204ENST00000530455 NISCHQ9Y2I1 1504 aa34.95■■■■□ 3.19
C8orf33-204ENST00000530455 CCDC180Q9P1Z9 1646 aa30.42■■■□□ 2.46
C8orf33-204ENST00000530455 ZCCHC6Q5VYS8 1495 aaKnown RBP29.35■■■□□ 2.29
C8orf33-204ENST00000530455 DCAF8L2P0C7V8 631 aa28.9■■■□□ 2.22
C8orf33-204ENST00000530455 ABCC9O60706 1549 aa28.85■■■□□ 2.21
C8orf33-204ENST00000530455 DCAF1Q9Y4B6 1507 aa28.85■■■□□ 2.21
C8orf33-204ENST00000530455 SHROOM4Q9ULL8 1493 aa28.56■■■□□ 2.16
C8orf33-204ENST00000530455 MYO15BQ96JP2 1530 aa28.5■■■□□ 2.15
C8orf33-204ENST00000530455 NACADO15069 1562 aa28.34■■■□□ 2.13
C8orf33-204ENST00000530455 RB1CC1Q8TDY2 1594 aa28.1■■■□□ 2.09
C8orf33-204ENST00000530455 SCRIBQ14160 1630 aa28.04■■■□□ 2.08
C8orf33-204ENST00000530455 UNC13AQ9UPW8 1703 aa27.6■■■□□ 2.01
C8orf33-204ENST00000530455 SUPT5HO00267 1087 aaKnown RBP27.46■■□□□ 1.99
C8orf33-204ENST00000530455 BICRAQ9NZM4 1560 aa27.33■■□□□ 1.97
C8orf33-204ENST00000530455 PABPN1Q86U42 306 aaKnown RBP eCLIP27.24■■□□□ 1.95
C8orf33-204ENST00000530455 CECR2Q9BXF3 1484 aa27.21■■□□□ 1.95
C8orf33-204ENST00000530455 RSF1Q96T23 1441 aaPredicted RBP27.14■■□□□ 1.93
C8orf33-204ENST00000530455 MROH2BQ7Z745 1585 aa27.03■■□□□ 1.92
C8orf33-204ENST00000530455 BAZ1AQ9NRL2 1556 aaPredicted RBP26.95■■□□□ 1.91
C8orf33-204ENST00000530455 SMARCA4P51532 1647 aa26.86■■□□□ 1.89
C8orf33-204ENST00000530455 WIZO95785 1651 aa26.81■■□□□ 1.88
C8orf33-204ENST00000530455 HRCP23327 699 aa26.69■■□□□ 1.86
C8orf33-204ENST00000530455 PEG3Q9GZU2 1588 aa26.52■■□□□ 1.84
C8orf33-204ENST00000530455 TOP2AP11388 1531 aaKnown RBP26.48■■□□□ 1.83
C8orf33-204ENST00000530455 EIF4G1Q04637 1599 aaKnown RBP26.47■■□□□ 1.83
C8orf33-204ENST00000530455 ATAD2BQ9ULI0 1458 aa26.43■■□□□ 1.82
C8orf33-204ENST00000530455 SMARCA2P51531 1590 aa26.37■■□□□ 1.81
C8orf33-204ENST00000530455 CHIC1Q5VXU3 224 aa26.29■■□□□ 1.8
C8orf33-204ENST00000530455 BAZ1BQ9UIG0 1483 aaKnown RBP26.26■■□□□ 1.79
C8orf33-204ENST00000530455 CCDC88BA6NC98 1476 aa26.25■■□□□ 1.79
C8orf33-204ENST00000530455 NCAPD3P42695 1498 aa26.19■■□□□ 1.78
C8orf33-204ENST00000530455 HMGXB3Q12766 1538 aa26.13■■□□□ 1.77
C8orf33-204ENST00000530455 CC2D2AQ9P2K1 1620 aa26.09■■□□□ 1.77
C8orf33-204ENST00000530455 PCGF6Q9BYE7 350 aa25.96■■□□□ 1.75
C8orf33-204ENST00000530455 PELP1Q8IZL8 1130 aaKnown RBP25.89■■□□□ 1.73
C8orf33-204ENST00000530455 PPARGC1BQ86YN6 1023 aaKnown RBP25.84■■□□□ 1.73
C8orf33-204ENST00000530455 TRIM41Q8WV44 630 aa25.79■■□□□ 1.72
C8orf33-204ENST00000530455 ABCC8Q09428 1581 aa25.72■■□□□ 1.71
C8orf33-204ENST00000530455 CFTRP13569 1480 aa25.62■■□□□ 1.69
C8orf33-204ENST00000530455 DNAJC5BQ9UF47 199 aa25.57■■□□□ 1.68
C8orf33-204ENST00000530455 CADPSQ9ULU8 1353 aa25.52■■□□□ 1.68
C8orf33-204ENST00000530455 WRNQ14191 1432 aaPredicted RBP eCLIP25.51■■□□□ 1.675e-6■■■■■ 77.6
C8orf33-204ENST00000530455 PRDM2Q13029 1718 aa25.44■■□□□ 1.66
C8orf33-204ENST00000530455 SYNJ1O43426 1573 aa25.44■■□□□ 1.66
C8orf33-204ENST00000530455 TRIM26Q12899 539 aaPredicted RBP25.36■■□□□ 1.65
C8orf33-204ENST00000530455 FAM9AQ8IZU1 332 aaPredicted RBP25.36■■□□□ 1.65
C8orf33-204ENST00000530455 NESP48681 1621 aa25.36■■□□□ 1.65
C8orf33-204ENST00000530455 LOC105371045A0A1W2PR82 267 aa25.32■■□□□ 1.64
C8orf33-204ENST00000530455 TOP2BQ02880 1626 aa25.3■■□□□ 1.64
C8orf33-204ENST00000530455 ZEB1P37275 1124 aaPredicted RBP25.29■■□□□ 1.64
C8orf33-204ENST00000530455 LAMC3Q9Y6N6 1575 aa25.27■■□□□ 1.64
C8orf33-204ENST00000530455 BIVM-ERCC5R4GMW8 1640 aa25.27■■□□□ 1.64
C8orf33-204ENST00000530455 CUX1P39880 1505 aa25.26■■□□□ 1.64
C8orf33-204ENST00000530455 FANCD2Q9BXW9 1451 aa25.24■■□□□ 1.63
C8orf33-204ENST00000530455 SOGA1O94964 1423 aa25.24■■□□□ 1.63
C8orf33-204ENST00000530455 RUSC2Q8N2Y8 1516 aa25.17■■□□□ 1.62
C8orf33-204ENST00000530455 SCAF1Q9H7N4 1312 aaKnown RBP25.1■■□□□ 1.61
C8orf33-204ENST00000530455 EEA1Q15075 1411 aa25.08■■□□□ 1.61
C8orf33-204ENST00000530455 PDS5BQ9NTI5 1447 aa25.08■■□□□ 1.6
C8orf33-204ENST00000530455 CEP164Q9UPV0 1460 aa25.06■■□□□ 1.6
C8orf33-204ENST00000530455 EHMT2Q96KQ7 1210 aa25.03■■□□□ 1.6
C8orf33-204ENST00000530455 CSRNP3Q8WYN3 585 aa25.01■■□□□ 1.59
C8orf33-204ENST00000530455 KIF21AQ7Z4S6 1674 aa25.01■■□□□ 1.59
C8orf33-204ENST00000530455 DNMBPQ6XZF7 1577 aa25■■□□□ 1.59
C8orf33-204ENST00000530455 TOPBP1Q92547 1522 aa24.98■■□□□ 1.59
C8orf33-204ENST00000530455 FGD5Q6ZNL6 1462 aa24.98■■□□□ 1.59
C8orf33-204ENST00000530455 URB2Q14146 1524 aaKnown RBP24.96■■□□□ 1.59
C8orf33-204ENST00000530455 MYT1Q01538 1121 aa24.96■■□□□ 1.59
C8orf33-204ENST00000530455 POLA1P09884 1462 aaPredicted RBP24.86■■□□□ 1.57
C8orf33-204ENST00000530455 KIF27Q86VH2 1401 aa24.85■■□□□ 1.57
C8orf33-204ENST00000530455 CUX2O14529 1486 aa24.81■■□□□ 1.56
C8orf33-204ENST00000530455 RAD54L2Q9Y4B4 1467 aa24.81■■□□□ 1.56
C8orf33-204ENST00000530455 KIF21BO75037 1637 aa24.79■■□□□ 1.56
C8orf33-204ENST00000530455 GOLGA3Q08378 1498 aa24.77■■□□□ 1.56
C8orf33-204ENST00000530455 MRC2Q9UBG0 1479 aa24.77■■□□□ 1.56
C8orf33-204ENST00000530455 ABCA10Q8WWZ4 1543 aa24.74■■□□□ 1.55
C8orf33-204ENST00000530455 PRXQ9BXM0 1461 aa24.71■■□□□ 1.55
C8orf33-204ENST00000530455 RAPGEF2Q9Y4G8 1499 aa24.71■■□□□ 1.55
C8orf33-204ENST00000530455 TNIKQ9UKE5 1360 aa24.71■■□□□ 1.55
C8orf33-204ENST00000530455 UBTFP17480 764 aaKnown RBP24.69■■□□□ 1.54
C8orf33-204ENST00000530455 ERCC6Q03468 1493 aa24.69■■□□□ 1.54
C8orf33-204ENST00000530455 IGF1RP08069 1367 aa24.68■■□□□ 1.54
C8orf33-204ENST00000530455 WDR97A6NE52 1622 aa24.66■■□□□ 1.54
C8orf33-204ENST00000530455 WDR62O43379 1518 aa24.65■■□□□ 1.54
C8orf33-204ENST00000530455 ERICH3Q5RHP9 1530 aa24.62■■□□□ 1.53
C8orf33-204ENST00000530455 TARBP1Q13395 1621 aaKnown RBP24.61■■□□□ 1.53
C8orf33-204ENST00000530455 ACIN1Q9UKV3 1341 aaKnown RBP24.61■■□□□ 1.53
C8orf33-204ENST00000530455 THOC2Q8NI27 1593 aaKnown RBP24.59■■□□□ 1.53
C8orf33-204ENST00000530455 CEP162Q5TB80 1403 aa24.59■■□□□ 1.53
C8orf33-204ENST00000530455 TDRD9Q8NDG6 1382 aaKnown RBP24.56■■□□□ 1.52
C8orf33-204ENST00000530455 ABCA5Q8WWZ7 1642 aa24.54■■□□□ 1.52
C8orf33-204ENST00000530455 CARMIL1Q5VZK9 1371 aa24.53■■□□□ 1.52
C8orf33-204ENST00000530455 GAPVD1Q14C86 1478 aa24.49■■□□□ 1.51
C8orf33-204ENST00000530455 IFT140Q96RY7 1462 aa24.46■■□□□ 1.51
C8orf33-204ENST00000530455 NEUROD1Q13562 356 aa24.42■■□□□ 1.5
C8orf33-204ENST00000530455 CUL7Q14999 1698 aa24.42■■□□□ 1.5
C8orf33-204ENST00000530455 AQRO60306 1485 aaKnown RBP eCLIP24.41■■□□□ 1.58e-8■■■■□ 24.7
C8orf33-204ENST00000530455 ZNF608Q9ULD9 1512 aaPredicted RBP24.4■■□□□ 1.5
C8orf33-204ENST00000530455 CLIP1P30622 1438 aa24.39■■□□□ 1.5
C8orf33-204ENST00000530455 CENPBP07199 599 aaPredicted RBP24.35■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms