RNA–Protein interactions for RNA: ENST00000528611.1

MACF1-228, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 380 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-228ENST00000528611 AEBP2Q6ZN18 517 aaPredicted RBP16.13■□□□□ 0.17
MACF1-228ENST00000528611 CHIC1Q5VXU3 224 aa15.09■□□□□ 0.01
MACF1-228ENST00000528611 NISCHQ9Y2I1 1504 aa14.66□□□□□ -0.06
MACF1-228ENST00000528611 SENP3Q9H4L4 574 aaPredicted RBP13.84□□□□□ -0.19
MACF1-228ENST00000528611 PHF23Q9BUL5 403 aaPredicted RBP13.61□□□□□ -0.23
MACF1-228ENST00000528611 CCDC180Q9P1Z9 1646 aa12.99□□□□□ -0.33
MACF1-228ENST00000528611 FOXD1Q16676 465 aa12.93□□□□□ -0.34
MACF1-228ENST00000528611 POTEDQ86YR6 584 aa12.56□□□□□ -0.4
MACF1-228ENST00000528611 ABCC9O60706 1549 aa12.31□□□□□ -0.44
MACF1-228ENST00000528611 MYO15BQ96JP2 1530 aa12.27□□□□□ -0.44
MACF1-228ENST00000528611 MSH5O43196 834 aa12.26□□□□□ -0.45
MACF1-228ENST00000528611 ZCCHC6Q5VYS8 1495 aaKnown RBP12.26□□□□□ -0.45
MACF1-228ENST00000528611 DCAF1Q9Y4B6 1507 aa12.26□□□□□ -0.45
MACF1-228ENST00000528611 NACADO15069 1562 aa12.17□□□□□ -0.46
MACF1-228ENST00000528611 RB1CC1Q8TDY2 1594 aa12.09□□□□□ -0.47
MACF1-228ENST00000528611 DCAF8L2P0C7V8 631 aa12.01□□□□□ -0.49
MACF1-228ENST00000528611 PIAS4Q8N2W9 510 aaPredicted RBP11.96□□□□□ -0.49
MACF1-228ENST00000528611 PLPPR3Q6T4P5 718 aa11.81□□□□□ -0.52
MACF1-228ENST00000528611 PPP6R1Q9UPN7 881 aa11.8□□□□□ -0.52
MACF1-228ENST00000528611 SHROOM4Q9ULL8 1493 aa11.76□□□□□ -0.53
MACF1-228ENST00000528611 ADRA2BP18089 450 aa11.72□□□□□ -0.53
MACF1-228ENST00000528611 UNC13AQ9UPW8 1703 aa11.7□□□□□ -0.54
MACF1-228ENST00000528611 SCRIBQ14160 1630 aa11.68□□□□□ -0.54
MACF1-228ENST00000528611 BICRAQ9NZM4 1560 aa11.64□□□□□ -0.55
MACF1-228ENST00000528611 PABPN1Q86U42 306 aaKnown RBP eCLIP11.51□□□□□ -0.57
MACF1-228ENST00000528611 BAZ1AQ9NRL2 1556 aaPredicted RBP11.37□□□□□ -0.59
MACF1-228ENST00000528611 EIF4G1Q04637 1599 aaKnown RBP11.34□□□□□ -0.59
MACF1-228ENST00000528611 SMARCA4P51532 1647 aa11.29□□□□□ -0.6
MACF1-228ENST00000528611 CECR2Q9BXF3 1484 aa11.29□□□□□ -0.6
MACF1-228ENST00000528611 PEG3Q9GZU2 1588 aa11.28□□□□□ -0.6
MACF1-228ENST00000528611 SMARCA2P51531 1590 aa11.25□□□□□ -0.61
MACF1-228ENST00000528611 RSF1Q96T23 1441 aaPredicted RBP11.23□□□□□ -0.61
MACF1-228ENST00000528611 NCAPD3P42695 1498 aa11.23□□□□□ -0.61
MACF1-228ENST00000528611 MROH2BQ7Z745 1585 aa11.23□□□□□ -0.61
MACF1-228ENST00000528611 CC2D2AQ9P2K1 1620 aa11.2□□□□□ -0.62
MACF1-228ENST00000528611 ATAD2BQ9ULI0 1458 aa11.19□□□□□ -0.62
MACF1-228ENST00000528611 HMGXB3Q12766 1538 aa11.18□□□□□ -0.62
MACF1-228ENST00000528611 BAZ1BQ9UIG0 1483 aaKnown RBP11.11□□□□□ -0.63
MACF1-228ENST00000528611 WIZO95785 1651 aa11.08□□□□□ -0.64
MACF1-228ENST00000528611 DNAJC5BQ9UF47 199 aa11.07□□□□□ -0.64
MACF1-228ENST00000528611 TOP2AP11388 1531 aaKnown RBP11.07□□□□□ -0.64
MACF1-228ENST00000528611 SUPT5HO00267 1087 aaKnown RBP10.99□□□□□ -0.65
MACF1-228ENST00000528611 DMRT2Q9Y5R5 561 aa10.93□□□□□ -0.66
MACF1-228ENST00000528611 CCDC88BA6NC98 1476 aa10.91□□□□□ -0.66
MACF1-228ENST00000528611 MAPK8IP2Q13387 824 aaPredicted RBP10.88□□□□□ -0.67
MACF1-228ENST00000528611 LAMC3Q9Y6N6 1575 aa10.88□□□□□ -0.67
MACF1-228ENST00000528611 CADPSQ9ULU8 1353 aa10.88□□□□□ -0.67
MACF1-228ENST00000528611 CFTRP13569 1480 aa10.87□□□□□ -0.67
MACF1-228ENST00000528611 PDS5BQ9NTI5 1447 aa10.81□□□□□ -0.68
MACF1-228ENST00000528611 SCAF1Q9H7N4 1312 aaKnown RBP10.78□□□□□ -0.68
MACF1-228ENST00000528611 PRDM2Q13029 1718 aa10.77□□□□□ -0.69
MACF1-228ENST00000528611 ABCC8Q09428 1581 aa10.71□□□□□ -0.69
MACF1-228ENST00000528611 NESP48681 1621 aa10.7□□□□□ -0.7
MACF1-228ENST00000528611 FANCD2Q9BXW9 1451 aa10.7□□□□□ -0.7
MACF1-228ENST00000528611 CACNB1Q02641 598 aaPredicted RBP10.7□□□□□ -0.7
MACF1-228ENST00000528611 CEP164Q9UPV0 1460 aa10.68□□□□□ -0.7
MACF1-228ENST00000528611 ERCC6Q03468 1493 aa10.65□□□□□ -0.7
MACF1-228ENST00000528611 MRC2Q9UBG0 1479 aa10.62□□□□□ -0.71
MACF1-228ENST00000528611 KIF21AQ7Z4S6 1674 aa10.61□□□□□ -0.71
MACF1-228ENST00000528611 WRNQ14191 1432 aaPredicted RBP eCLIP10.59□□□□□ -0.71
MACF1-228ENST00000528611 WDR62O43379 1518 aa10.59□□□□□ -0.71
MACF1-228ENST00000528611 DNMBPQ6XZF7 1577 aa10.59□□□□□ -0.71
MACF1-228ENST00000528611 THOC2Q8NI27 1593 aaKnown RBP10.56□□□□□ -0.72
MACF1-228ENST00000528611 CUX2O14529 1486 aa10.56□□□□□ -0.72
MACF1-228ENST00000528611 TOP2BQ02880 1626 aa10.55□□□□□ -0.72
MACF1-228ENST00000528611 TOPBP1Q92547 1522 aa10.55□□□□□ -0.72
MACF1-228ENST00000528611 BIVM-ERCC5R4GMW8 1640 aa10.55□□□□□ -0.72
MACF1-228ENST00000528611 URB2Q14146 1524 aaKnown RBP10.54□□□□□ -0.72
MACF1-228ENST00000528611 CUX1P39880 1505 aa10.53□□□□□ -0.72
MACF1-228ENST00000528611 WDR97A6NE52 1622 aa10.5□□□□□ -0.73
MACF1-228ENST00000528611 IFT140Q96RY7 1462 aa10.49□□□□□ -0.73
MACF1-228ENST00000528611 TRIM41Q8WV44 630 aa10.48□□□□□ -0.73
MACF1-228ENST00000528611 POLA1P09884 1462 aaPredicted RBP10.48□□□□□ -0.73
MACF1-228ENST00000528611 FGD5Q6ZNL6 1462 aa10.47□□□□□ -0.73
MACF1-228ENST00000528611 SYNJ1O43426 1573 aa10.47□□□□□ -0.73
MACF1-228ENST00000528611 SOGA1O94964 1423 aa10.46□□□□□ -0.74
MACF1-228ENST00000528611 ABCA10Q8WWZ4 1543 aa10.44□□□□□ -0.74
MACF1-228ENST00000528611 RNF39Q9H2S5 420 aa10.42□□□□□ -0.74
MACF1-228ENST00000528611 TARBP1Q13395 1621 aaKnown RBP10.42□□□□□ -0.74
MACF1-228ENST00000528611 EEA1Q15075 1411 aa10.41□□□□□ -0.74
MACF1-228ENST00000528611 DCAF8L1A6NGE4 600 aa10.4□□□□□ -0.74
MACF1-228ENST00000528611 HOXD11P31277 338 aaPredicted RBP10.4□□□□□ -0.74
MACF1-228ENST00000528611 KIF27Q86VH2 1401 aa10.39□□□□□ -0.75
MACF1-228ENST00000528611 RAD54L2Q9Y4B4 1467 aa10.36□□□□□ -0.75
MACF1-228ENST00000528611 ERICH3Q5RHP9 1530 aa10.35□□□□□ -0.75
MACF1-228ENST00000528611 GAPVD1Q14C86 1478 aa10.35□□□□□ -0.75
MACF1-228ENST00000528611 ABCA5Q8WWZ7 1642 aa10.34□□□□□ -0.75
MACF1-228ENST00000528611 GRIN2BQ13224 1484 aa10.33□□□□□ -0.76
MACF1-228ENST00000528611 MAGI1Q96QZ7 1491 aaPredicted RBP10.31□□□□□ -0.76
MACF1-228ENST00000528611 EIF4G3O43432 1585 aaKnown RBP10.31□□□□□ -0.76
MACF1-228ENST00000528611 TDRD9Q8NDG6 1382 aaKnown RBP10.3□□□□□ -0.76
MACF1-228ENST00000528611 IGF1RP08069 1367 aa10.29□□□□□ -0.76
MACF1-228ENST00000528611 ZNF608Q9ULD9 1512 aaPredicted RBP10.29□□□□□ -0.76
MACF1-228ENST00000528611 PPP4R3CPQ6ZMV5 832 aa10.29□□□□□ -0.76
MACF1-228ENST00000528611 AQRO60306 1485 aaKnown RBP eCLIP10.29□□□□□ -0.76
MACF1-228ENST00000528611 CSRNP3Q8WYN3 585 aa10.28□□□□□ -0.76
MACF1-228ENST00000528611 CUL7Q14999 1698 aa10.28□□□□□ -0.76
MACF1-228ENST00000528611 C1QBPQ07021 282 aaKnown RBP10.27□□□□□ -0.77
MACF1-228ENST00000528611 FHAD1B1AJZ9 1412 aa10.26□□□□□ -0.77
MACF1-228ENST00000528611 PBRM1Q86U86 1689 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms