RNA–Protein interactions for RNA: ENST00000528429.5

SOX6-211, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX6, Length 2,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-211ENST00000528429 NISCHQ9Y2I1 1504 aa17.08■□□□□ 0.32
SOX6-211ENST00000528429 CCDC180Q9P1Z9 1646 aa14.76□□□□□ -0.05
SOX6-211ENST00000528429 DCAF8L2P0C7V8 631 aa14.36□□□□□ -0.11
SOX6-211ENST00000528429 ZCCHC6Q5VYS8 1495 aaKnown RBP14.34□□□□□ -0.11
SOX6-211ENST00000528429 SHROOM4Q9ULL8 1493 aa14.2□□□□□ -0.14
SOX6-211ENST00000528429 ABCC9O60706 1549 aa14.13□□□□□ -0.15
SOX6-211ENST00000528429 DCAF1Q9Y4B6 1507 aa14.02□□□□□ -0.16
SOX6-211ENST00000528429 MYO15BQ96JP2 1530 aa13.82□□□□□ -0.2
SOX6-211ENST00000528429 NACADO15069 1562 aa13.79□□□□□ -0.2
SOX6-211ENST00000528429 SCRIBQ14160 1630 aa13.75□□□□□ -0.21
SOX6-211ENST00000528429 SUPT5HO00267 1087 aaKnown RBP13.7□□□□□ -0.22
SOX6-211ENST00000528429 RB1CC1Q8TDY2 1594 aa13.68□□□□□ -0.22
SOX6-211ENST00000528429 PABPN1Q86U42 306 aaKnown RBP eCLIP13.4□□□□□ -0.26
SOX6-211ENST00000528429 UNC13AQ9UPW8 1703 aa13.37□□□□□ -0.27
SOX6-211ENST00000528429 CECR2Q9BXF3 1484 aa13.34□□□□□ -0.27
SOX6-211ENST00000528429 RSF1Q96T23 1441 aaPredicted RBP13.32□□□□□ -0.28
SOX6-211ENST00000528429 BICRAQ9NZM4 1560 aa13.27□□□□□ -0.29
SOX6-211ENST00000528429 MROH2BQ7Z745 1585 aa13.24□□□□□ -0.29
SOX6-211ENST00000528429 BAZ1AQ9NRL2 1556 aaPredicted RBP13.18□□□□□ -0.3
SOX6-211ENST00000528429 WIZO95785 1651 aa13.12□□□□□ -0.31
SOX6-211ENST00000528429 SMARCA4P51532 1647 aa13.11□□□□□ -0.31
SOX6-211ENST00000528429 CHIC1Q5VXU3 224 aa13.04□□□□□ -0.32
SOX6-211ENST00000528429 TOP2AP11388 1531 aaKnown RBP12.95□□□□□ -0.34
SOX6-211ENST00000528429 SLC24A1O60721 1099 aa12.94□□□□□ -0.34
SOX6-211ENST00000528429 ATAD2BQ9ULI0 1458 aa12.91□□□□□ -0.34
SOX6-211ENST00000528429 EIF4G1Q04637 1599 aaKnown RBP12.89□□□□□ -0.35
SOX6-211ENST00000528429 PEG3Q9GZU2 1588 aa12.88□□□□□ -0.35
SOX6-211ENST00000528429 SMARCA2P51531 1590 aa12.87□□□□□ -0.35
SOX6-211ENST00000528429 CCDC88BA6NC98 1476 aa12.87□□□□□ -0.35
SOX6-211ENST00000528429 BAZ1BQ9UIG0 1483 aaKnown RBP12.87□□□□□ -0.35
SOX6-211ENST00000528429 TRIM41Q8WV44 630 aa12.81□□□□□ -0.36
SOX6-211ENST00000528429 NCAPD3P42695 1498 aa12.76□□□□□ -0.37
SOX6-211ENST00000528429 HMGXB3Q12766 1538 aa12.71□□□□□ -0.37
SOX6-211ENST00000528429 PELP1Q8IZL8 1130 aaKnown RBP12.71□□□□□ -0.37
SOX6-211ENST00000528429 CC2D2AQ9P2K1 1620 aa12.7□□□□□ -0.38
SOX6-211ENST00000528429 FAM9AQ8IZU1 332 aaPredicted RBP12.68□□□□□ -0.38
SOX6-211ENST00000528429 ABCC8Q09428 1581 aa12.66□□□□□ -0.38
SOX6-211ENST00000528429 MYT1Q01538 1121 aa12.65□□□□□ -0.38
SOX6-211ENST00000528429 LOC105371045A0A1W2PR82 267 aa12.63□□□□□ -0.39
SOX6-211ENST00000528429 EHMT2Q96KQ7 1210 aa12.58□□□□□ -0.4
SOX6-211ENST00000528429 WRNQ14191 1432 aaPredicted RBP eCLIP12.55□□□□□ -0.4
SOX6-211ENST00000528429 PRKCSHP14314 528 aaPredicted RBP12.55□□□□□ -0.4
SOX6-211ENST00000528429 CFTRP13569 1480 aa12.5□□□□□ -0.41
SOX6-211ENST00000528429 DNAJC5BQ9UF47 199 aa12.5□□□□□ -0.41
SOX6-211ENST00000528429 CADPSQ9ULU8 1353 aa12.49□□□□□ -0.41
SOX6-211ENST00000528429 SYNJ1O43426 1573 aa12.47□□□□□ -0.41
SOX6-211ENST00000528429 SOGA1O94964 1423 aa12.45□□□□□ -0.42
SOX6-211ENST00000528429 NESP48681 1621 aa12.4□□□□□ -0.42
SOX6-211ENST00000528429 RUSC2Q8N2Y8 1516 aa12.39□□□□□ -0.43
SOX6-211ENST00000528429 TOP2BQ02880 1626 aa12.37□□□□□ -0.43
SOX6-211ENST00000528429 CUX1P39880 1505 aa12.37□□□□□ -0.43
SOX6-211ENST00000528429 CSRNP3Q8WYN3 585 aa12.36□□□□□ -0.43
SOX6-211ENST00000528429 FANCD2Q9BXW9 1451 aa12.36□□□□□ -0.43
SOX6-211ENST00000528429 TTBK1Q5TCY1 1321 aaPredicted RBP12.35□□□□□ -0.43
SOX6-211ENST00000528429 EEA1Q15075 1411 aa12.33□□□□□ -0.44
SOX6-211ENST00000528429 PRDM2Q13029 1718 aa12.32□□□□□ -0.44
SOX6-211ENST00000528429 BIVM-ERCC5R4GMW8 1640 aa12.32□□□□□ -0.44
SOX6-211ENST00000528429 LAMC3Q9Y6N6 1575 aa12.29□□□□□ -0.44
SOX6-211ENST00000528429 UBTFP17480 764 aaKnown RBP12.29□□□□□ -0.44
SOX6-211ENST00000528429 CEP164Q9UPV0 1460 aa12.27□□□□□ -0.45
SOX6-211ENST00000528429 PDS5BQ9NTI5 1447 aa12.26□□□□□ -0.45
SOX6-211ENST00000528429 FGD5Q6ZNL6 1462 aa12.24□□□□□ -0.45
SOX6-211ENST00000528429 KIF27Q86VH2 1401 aa12.22□□□□□ -0.45
SOX6-211ENST00000528429 GOLGA3Q08378 1498 aa12.22□□□□□ -0.45
SOX6-211ENST00000528429 CUX2O14529 1486 aa12.21□□□□□ -0.46
SOX6-211ENST00000528429 TOPBP1Q92547 1522 aa12.21□□□□□ -0.46
SOX6-211ENST00000528429 APLP2Q06481 763 aa12.2□□□□□ -0.46
SOX6-211ENST00000528429 DNMBPQ6XZF7 1577 aa12.2□□□□□ -0.46
SOX6-211ENST00000528429 URB2Q14146 1524 aaKnown RBP12.19□□□□□ -0.46
SOX6-211ENST00000528429 TNIKQ9UKE5 1360 aa12.18□□□□□ -0.46
SOX6-211ENST00000528429 RANGAP1P46060 587 aaPredicted RBP12.18□□□□□ -0.46
SOX6-211ENST00000528429 RAD54L2Q9Y4B4 1467 aa12.17□□□□□ -0.46
SOX6-211ENST00000528429 RAPGEF2Q9Y4G8 1499 aa12.17□□□□□ -0.46
SOX6-211ENST00000528429 CEP162Q5TB80 1403 aa12.17□□□□□ -0.46
SOX6-211ENST00000528429 POLA1P09884 1462 aaPredicted RBP12.17□□□□□ -0.46
SOX6-211ENST00000528429 KIF21AQ7Z4S6 1674 aa12.17□□□□□ -0.46
SOX6-211ENST00000528429 KIF21BO75037 1637 aa12.15□□□□□ -0.46
SOX6-211ENST00000528429 PCGF6Q9BYE7 350 aa12.13□□□□□ -0.47
SOX6-211ENST00000528429 PRXQ9BXM0 1461 aa12.11□□□□□ -0.47
SOX6-211ENST00000528429 PPARGC1BQ86YN6 1023 aaKnown RBP12.11□□□□□ -0.47
SOX6-211ENST00000528429 IGF1RP08069 1367 aa12.11□□□□□ -0.47
SOX6-211ENST00000528429 ERCC6Q03468 1493 aa12.1□□□□□ -0.47
SOX6-211ENST00000528429 ERICH6Q7L0X2 663 aa12.1□□□□□ -0.47
SOX6-211ENST00000528429 TDRD9Q8NDG6 1382 aaKnown RBP12.09□□□□□ -0.47
SOX6-211ENST00000528429 ABCA10Q8WWZ4 1543 aa12.09□□□□□ -0.47
SOX6-211ENST00000528429 MRC2Q9UBG0 1479 aa12.08□□□□□ -0.47
SOX6-211ENST00000528429 CARMIL1Q5VZK9 1371 aa12.07□□□□□ -0.48
SOX6-211ENST00000528429 CLIP1P30622 1438 aa12.07□□□□□ -0.48
SOX6-211ENST00000528429 ERICH3Q5RHP9 1530 aa12.06□□□□□ -0.48
SOX6-211ENST00000528429 DAXXQ9UER7 740 aaPredicted RBP12.05□□□□□ -0.48
SOX6-211ENST00000528429 TRIM26Q12899 539 aaPredicted RBP12.02□□□□□ -0.49
SOX6-211ENST00000528429 GAPVD1Q14C86 1478 aa12.01□□□□□ -0.49
SOX6-211ENST00000528429 WDR62O43379 1518 aa11.98□□□□□ -0.49
SOX6-211ENST00000528429 WDR97A6NE52 1622 aa11.97□□□□□ -0.49
SOX6-211ENST00000528429 AQRO60306 1485 aaKnown RBP eCLIP11.97□□□□□ -0.49
SOX6-211ENST00000528429 TARBP1Q13395 1621 aaKnown RBP11.97□□□□□ -0.49
SOX6-211ENST00000528429 ABCA5Q8WWZ7 1642 aa11.96□□□□□ -0.5
SOX6-211ENST00000528429 IFT140Q96RY7 1462 aa11.94□□□□□ -0.5
SOX6-211ENST00000528429 ZNF608Q9ULD9 1512 aaPredicted RBP11.94□□□□□ -0.5
SOX6-211ENST00000528429 VPS8Q8N3P4 1428 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 275 ms