RNA–Protein interactions for RNA: ENST00000528216.5

PGAP2-231, Transcript of post-GPI attachment to proteins 2, humanhuman

TSL 1 (best)

Gene PGAP2, Length 1,815 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP2-231ENST00000528216 NISCHQ9Y2I1 1504 aa22.07■■□□□ 1.12
PGAP2-231ENST00000528216 CCDC180Q9P1Z9 1646 aa19.18■□□□□ 0.66
PGAP2-231ENST00000528216 ABCC9O60706 1549 aa18.76■□□□□ 0.59
PGAP2-231ENST00000528216 ZCCHC6Q5VYS8 1495 aaKnown RBP18.64■□□□□ 0.57
PGAP2-231ENST00000528216 DCAF1Q9Y4B6 1507 aa18.37■□□□□ 0.53
PGAP2-231ENST00000528216 DCAF8L2P0C7V8 631 aa18.35■□□□□ 0.53
PGAP2-231ENST00000528216 SHROOM4Q9ULL8 1493 aa18.1■□□□□ 0.49
PGAP2-231ENST00000528216 NACADO15069 1562 aa18.05■□□□□ 0.48
PGAP2-231ENST00000528216 RB1CC1Q8TDY2 1594 aa18.04■□□□□ 0.48
PGAP2-231ENST00000528216 MYO15BQ96JP2 1530 aa18.01■□□□□ 0.47
PGAP2-231ENST00000528216 SUPT5HO00267 1087 aaKnown RBP17.67■□□□□ 0.42
PGAP2-231ENST00000528216 PABPN1Q86U42 306 aaKnown RBP eCLIP17.63■□□□□ 0.41
PGAP2-231ENST00000528216 SCRIBQ14160 1630 aa17.62■□□□□ 0.41
PGAP2-231ENST00000528216 UNC13AQ9UPW8 1703 aa17.56■□□□□ 0.4
PGAP2-231ENST00000528216 BICRAQ9NZM4 1560 aa17.46■□□□□ 0.39
PGAP2-231ENST00000528216 RSF1Q96T23 1441 aaPredicted RBP17.25■□□□□ 0.35
PGAP2-231ENST00000528216 CHIC1Q5VXU3 224 aa17.21■□□□□ 0.35
PGAP2-231ENST00000528216 DNAJC5BQ9UF47 199 aa17.09■□□□□ 0.33
PGAP2-231ENST00000528216 BAZ1AQ9NRL2 1556 aaPredicted RBP17.05■□□□□ 0.32
PGAP2-231ENST00000528216 EIF4G1Q04637 1599 aaKnown RBP17.01■□□□□ 0.31
PGAP2-231ENST00000528216 CECR2Q9BXF3 1484 aa17.01■□□□□ 0.31
PGAP2-231ENST00000528216 MROH2BQ7Z745 1585 aa17■□□□□ 0.31
PGAP2-231ENST00000528216 CC2D2AQ9P2K1 1620 aa16.91■□□□□ 0.3
PGAP2-231ENST00000528216 WIZO95785 1651 aa16.88■□□□□ 0.29
PGAP2-231ENST00000528216 SMARCA4P51532 1647 aa16.88■□□□□ 0.29
PGAP2-231ENST00000528216 TOP2AP11388 1531 aaKnown RBP16.81■□□□□ 0.28
PGAP2-231ENST00000528216 ATAD2BQ9ULI0 1458 aa16.73■□□□□ 0.27
PGAP2-231ENST00000528216 PEG3Q9GZU2 1588 aa16.72■□□□□ 0.27
PGAP2-231ENST00000528216 SMARCA2P51531 1590 aa16.69■□□□□ 0.26
PGAP2-231ENST00000528216 NCAPD3P42695 1498 aa16.68■□□□□ 0.26
PGAP2-231ENST00000528216 TRIM41Q8WV44 630 aa16.68■□□□□ 0.26
PGAP2-231ENST00000528216 BAZ1BQ9UIG0 1483 aaKnown RBP16.61■□□□□ 0.25
PGAP2-231ENST00000528216 CCDC88BA6NC98 1476 aa16.58■□□□□ 0.24
PGAP2-231ENST00000528216 HMGXB3Q12766 1538 aa16.57■□□□□ 0.24
PGAP2-231ENST00000528216 LOC105371045A0A1W2PR82 267 aa16.47■□□□□ 0.23
PGAP2-231ENST00000528216 EEA1Q15075 1411 aa16.37■□□□□ 0.21
PGAP2-231ENST00000528216 ABCC8Q09428 1581 aa16.31■□□□□ 0.2
PGAP2-231ENST00000528216 NESP48681 1621 aa16.27■□□□□ 0.2
PGAP2-231ENST00000528216 TRIM26Q12899 539 aaPredicted RBP16.25■□□□□ 0.19
PGAP2-231ENST00000528216 CADPSQ9ULU8 1353 aa16.25■□□□□ 0.19
PGAP2-231ENST00000528216 WRNQ14191 1432 aaPredicted RBP eCLIP16.25■□□□□ 0.199e-6■■■■■ 50.1
PGAP2-231ENST00000528216 FAM9AQ8IZU1 332 aaPredicted RBP16.24■□□□□ 0.19
PGAP2-231ENST00000528216 PCGF6Q9BYE7 350 aa16.22■□□□□ 0.19
PGAP2-231ENST00000528216 HRCP23327 699 aa16.21■□□□□ 0.19
PGAP2-231ENST00000528216 LAMC3Q9Y6N6 1575 aa16.18■□□□□ 0.18
PGAP2-231ENST00000528216 ERCC6Q03468 1493 aa16.15■□□□□ 0.18
PGAP2-231ENST00000528216 CFTRP13569 1480 aa16.15■□□□□ 0.18
PGAP2-231ENST00000528216 PDS5BQ9NTI5 1447 aa16.14■□□□□ 0.17
PGAP2-231ENST00000528216 SYNJ1O43426 1573 aa16.12■□□□□ 0.17
PGAP2-231ENST00000528216 TNIKQ9UKE5 1360 aa16.11■□□□□ 0.17
PGAP2-231ENST00000528216 TOP2BQ02880 1626 aa16.1■□□□□ 0.17
PGAP2-231ENST00000528216 CSRNP3Q8WYN3 585 aa16.1■□□□□ 0.17
PGAP2-231ENST00000528216 SOGA1O94964 1423 aa16.1■□□□□ 0.17
PGAP2-231ENST00000528216 BIVM-ERCC5R4GMW8 1640 aa16.09■□□□□ 0.17
PGAP2-231ENST00000528216 GOLGA3Q08378 1498 aa16.08■□□□□ 0.16
PGAP2-231ENST00000528216 KIF21BO75037 1637 aa16.07■□□□□ 0.16
PGAP2-231ENST00000528216 PRDM2Q13029 1718 aa16.06■□□□□ 0.16
PGAP2-231ENST00000528216 FANCD2Q9BXW9 1451 aa16.05■□□□□ 0.16
PGAP2-231ENST00000528216 CEP164Q9UPV0 1460 aa16.05■□□□□ 0.16
PGAP2-231ENST00000528216 KIF21AQ7Z4S6 1674 aa16■□□□□ 0.15
PGAP2-231ENST00000528216 CEP162Q5TB80 1403 aa16■□□□□ 0.15
PGAP2-231ENST00000528216 RUSC2Q8N2Y8 1516 aa15.97■□□□□ 0.15
PGAP2-231ENST00000528216 ZEB1P37275 1124 aaPredicted RBP15.95■□□□□ 0.14
PGAP2-231ENST00000528216 MRC2Q9UBG0 1479 aa15.93■□□□□ 0.14
PGAP2-231ENST00000528216 ERICH3Q5RHP9 1530 aa15.91■□□□□ 0.14
PGAP2-231ENST00000528216 EHMT2Q96KQ7 1210 aa15.89■□□□□ 0.13
PGAP2-231ENST00000528216 UBTFP17480 764 aaKnown RBP15.89■□□□□ 0.13
PGAP2-231ENST00000528216 THOC2Q8NI27 1593 aaKnown RBP15.89■□□□□ 0.13
PGAP2-231ENST00000528216 CUX1P39880 1505 aa15.88■□□□□ 0.13
PGAP2-231ENST00000528216 URB2Q14146 1524 aaKnown RBP15.86■□□□□ 0.13
PGAP2-231ENST00000528216 CUX2O14529 1486 aa15.84■□□□□ 0.13
PGAP2-231ENST00000528216 KIF27Q86VH2 1401 aa15.84■□□□□ 0.13
PGAP2-231ENST00000528216 WDR62O43379 1518 aa15.83■□□□□ 0.12
PGAP2-231ENST00000528216 PRXQ9BXM0 1461 aa15.82■□□□□ 0.12
PGAP2-231ENST00000528216 DNAJC5Q9H3Z4 198 aa15.81■□□□□ 0.12
PGAP2-231ENST00000528216 CLIP1P30622 1438 aa15.8■□□□□ 0.12
PGAP2-231ENST00000528216 TOPBP1Q92547 1522 aa15.79■□□□□ 0.12
PGAP2-231ENST00000528216 RAPGEF2Q9Y4G8 1499 aa15.78■□□□□ 0.12
PGAP2-231ENST00000528216 DNMBPQ6XZF7 1577 aa15.76■□□□□ 0.11
PGAP2-231ENST00000528216 VPS8Q8N3P4 1428 aa15.75■□□□□ 0.11
PGAP2-231ENST00000528216 POLA1P09884 1462 aaPredicted RBP15.67■□□□□ 0.1
PGAP2-231ENST00000528216 FGD5Q6ZNL6 1462 aa15.67■□□□□ 0.1
PGAP2-231ENST00000528216 IFT140Q96RY7 1462 aa15.65■□□□□ 0.1
PGAP2-231ENST00000528216 RAD54L2Q9Y4B4 1467 aa15.65■□□□□ 0.1
PGAP2-231ENST00000528216 APLP2Q06481 763 aa15.61■□□□□ 0.09
PGAP2-231ENST00000528216 ABCA10Q8WWZ4 1543 aa15.59■□□□□ 0.09
PGAP2-231ENST00000528216 ZNF608Q9ULD9 1512 aaPredicted RBP15.59■□□□□ 0.09
PGAP2-231ENST00000528216 IGF1RP08069 1367 aa15.59■□□□□ 0.09
PGAP2-231ENST00000528216 TDRD9Q8NDG6 1382 aaKnown RBP15.58■□□□□ 0.08
PGAP2-231ENST00000528216 PPARGC1BQ86YN6 1023 aaKnown RBP15.57■□□□□ 0.08
PGAP2-231ENST00000528216 TARBP1Q13395 1621 aaKnown RBP15.57■□□□□ 0.08
PGAP2-231ENST00000528216 AQRO60306 1485 aaKnown RBP eCLIP15.56■□□□□ 0.08
PGAP2-231ENST00000528216 ARAP1Q96P48 1450 aa15.55■□□□□ 0.08
PGAP2-231ENST00000528216 CARMIL1Q5VZK9 1371 aa15.53■□□□□ 0.08
PGAP2-231ENST00000528216 CUL7Q14999 1698 aa15.53■□□□□ 0.08
PGAP2-231ENST00000528216 MAP3K1Q13233 1512 aa15.5■□□□□ 0.07
PGAP2-231ENST00000528216 WDR97A6NE52 1622 aa15.49■□□□□ 0.07
PGAP2-231ENST00000528216 ARHGAP35Q9NRY4 1499 aa15.48■□□□□ 0.07
PGAP2-231ENST00000528216 CCER1Q8TC90 406 aaPredicted RBP15.48■□□□□ 0.07
PGAP2-231ENST00000528216 EIF4G3O43432 1585 aaKnown RBP15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms