RNA–Protein interactions for RNA: ENST00000525716.2

AP003486.1-201, humanhuman

BASIC

Gene AP003486.1, Length 3,994 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003486.1-201ENST00000525716 NISCHQ9Y2I1 1504 aa15.16■□□□□ 0.02
AP003486.1-201ENST00000525716 ABCC9O60706 1549 aa14.15□□□□□ -0.14
AP003486.1-201ENST00000525716 DCAF8L2P0C7V8 631 aa13.65□□□□□ -0.22
AP003486.1-201ENST00000525716 CCDC180Q9P1Z9 1646 aa13.53□□□□□ -0.24
AP003486.1-201ENST00000525716 DNAJC5BQ9UF47 199 aa13.34□□□□□ -0.27
AP003486.1-201ENST00000525716 PABPN1Q86U42 306 aaKnown RBP eCLIP13.29□□□□□ -0.28
AP003486.1-201ENST00000525716 RB1CC1Q8TDY2 1594 aa13.24□□□□□ -0.29
AP003486.1-201ENST00000525716 NACADO15069 1562 aa13.04□□□□□ -0.32
AP003486.1-201ENST00000525716 CECR2Q9BXF3 1484 aa12.76□□□□□ -0.37
AP003486.1-201ENST00000525716 MYO15BQ96JP2 1530 aa12.64□□□□□ -0.39
AP003486.1-201ENST00000525716 DNAJC5Q9H3Z4 198 aa12.61□□□□□ -0.39
AP003486.1-201ENST00000525716 SCRIBQ14160 1630 aa12.57□□□□□ -0.4
AP003486.1-201ENST00000525716 SHROOM4Q9ULL8 1493 aa12.56□□□□□ -0.4
AP003486.1-201ENST00000525716 BICRAQ9NZM4 1560 aa12.56□□□□□ -0.4
AP003486.1-201ENST00000525716 CC2D2AQ9P2K1 1620 aa12.54□□□□□ -0.4
AP003486.1-201ENST00000525716 EIF4G1Q04637 1599 aaKnown RBP12.47□□□□□ -0.41
AP003486.1-201ENST00000525716 UNC13AQ9UPW8 1703 aa12.47□□□□□ -0.41
AP003486.1-201ENST00000525716 ZCCHC6Q5VYS8 1495 aaKnown RBP12.44□□□□□ -0.42
AP003486.1-201ENST00000525716 ERCC6Q03468 1493 aa12.42□□□□□ -0.42
AP003486.1-201ENST00000525716 DCAF1Q9Y4B6 1507 aa12.4□□□□□ -0.42
AP003486.1-201ENST00000525716 TRIM41Q8WV44 630 aa12.28□□□□□ -0.44
AP003486.1-201ENST00000525716 CUX2O14529 1486 aa12.2□□□□□ -0.46
AP003486.1-201ENST00000525716 NCAPD3P42695 1498 aa12.06□□□□□ -0.48
AP003486.1-201ENST00000525716 BAZ1BQ9UIG0 1483 aaKnown RBP12.01□□□□□ -0.49
AP003486.1-201ENST00000525716 PDS5BQ9NTI5 1447 aa12□□□□□ -0.49
AP003486.1-201ENST00000525716 SMARCA2P51531 1590 aa12□□□□□ -0.49
AP003486.1-201ENST00000525716 ATAD2BQ9ULI0 1458 aa12□□□□□ -0.49
AP003486.1-201ENST00000525716 NESP48681 1621 aa11.94□□□□□ -0.5
AP003486.1-201ENST00000525716 OSCARQ8IYS5 282 aa11.93□□□□□ -0.5
AP003486.1-201ENST00000525716 HMGXB3Q12766 1538 aa11.86□□□□□ -0.51
AP003486.1-201ENST00000525716 BAZ1AQ9NRL2 1556 aaPredicted RBP11.86□□□□□ -0.51
AP003486.1-201ENST00000525716 TRHP20396 242 aaPredicted RBP11.85□□□□□ -0.51
AP003486.1-201ENST00000525716 CADPSQ9ULU8 1353 aa11.83□□□□□ -0.52
AP003486.1-201ENST00000525716 SMARCA4P51532 1647 aa11.81□□□□□ -0.52
AP003486.1-201ENST00000525716 LAMC3Q9Y6N6 1575 aa11.8□□□□□ -0.52
AP003486.1-201ENST00000525716 AEBP2Q6ZN18 517 aaPredicted RBP11.79□□□□□ -0.52
AP003486.1-201ENST00000525716 FBLN2P98095 1184 aa11.77□□□□□ -0.52
AP003486.1-201ENST00000525716 MRC2Q9UBG0 1479 aa11.76□□□□□ -0.53
AP003486.1-201ENST00000525716 CEP164Q9UPV0 1460 aa11.73□□□□□ -0.53
AP003486.1-201ENST00000525716 CYB5RLQ6IPT4 315 aa11.71□□□□□ -0.53
AP003486.1-201ENST00000525716 MROH2BQ7Z745 1585 aa11.66□□□□□ -0.54
AP003486.1-201ENST00000525716 FANCD2Q9BXW9 1451 aa11.66□□□□□ -0.54
AP003486.1-201ENST00000525716 THOC2Q8NI27 1593 aaKnown RBP11.65□□□□□ -0.54
AP003486.1-201ENST00000525716 KIF21AQ7Z4S6 1674 aa11.58□□□□□ -0.56
AP003486.1-201ENST00000525716 PEG3Q9GZU2 1588 aa11.57□□□□□ -0.56
AP003486.1-201ENST00000525716 WDR62O43379 1518 aa11.55□□□□□ -0.56
AP003486.1-201ENST00000525716 CHMP7Q8WUX9 453 aaPredicted RBP11.54□□□□□ -0.56
AP003486.1-201ENST00000525716 CFTRP13569 1480 aa11.49□□□□□ -0.57
AP003486.1-201ENST00000525716 IFT140Q96RY7 1462 aa11.48□□□□□ -0.57
AP003486.1-201ENST00000525716 PELP1Q8IZL8 1130 aaKnown RBP11.47□□□□□ -0.57
AP003486.1-201ENST00000525716 WIZO95785 1651 aa11.45□□□□□ -0.58
AP003486.1-201ENST00000525716 ABCC8Q09428 1581 aa11.43□□□□□ -0.58
AP003486.1-201ENST00000525716 RSF1Q96T23 1441 aaPredicted RBP11.42□□□□□ -0.58
AP003486.1-201ENST00000525716 URB2Q14146 1524 aaKnown RBP11.41□□□□□ -0.58
AP003486.1-201ENST00000525716 ARHGEF11O15085 1522 aa11.4□□□□□ -0.58
AP003486.1-201ENST00000525716 NPM1P06748 294 aaKnown RBP eCLIP11.38□□□□□ -0.59
AP003486.1-201ENST00000525716 ZNF608Q9ULD9 1512 aaPredicted RBP11.37□□□□□ -0.59
AP003486.1-201ENST00000525716 AQRO60306 1485 aaKnown RBP eCLIP11.37□□□□□ -0.59
AP003486.1-201ENST00000525716 TOP2AP11388 1531 aaKnown RBP11.36□□□□□ -0.59
AP003486.1-201ENST00000525716 TDRD9Q8NDG6 1382 aaKnown RBP11.36□□□□□ -0.59
AP003486.1-201ENST00000525716 RIMBP3CA6NJZ7 1639 aa11.35□□□□□ -0.59
AP003486.1-201ENST00000525716 RIMBP3BA6NNM3 1639 aa11.35□□□□□ -0.59
AP003486.1-201ENST00000525716 RIMBP3Q9UFD9 1639 aa11.35□□□□□ -0.59
AP003486.1-201ENST00000525716 SOGA1O94964 1423 aa11.33□□□□□ -0.6
AP003486.1-201ENST00000525716 TOPBP1Q92547 1522 aa11.32□□□□□ -0.6
AP003486.1-201ENST00000525716 CCDC88BA6NC98 1476 aa11.3□□□□□ -0.6
AP003486.1-201ENST00000525716 SUPT5HO00267 1087 aaKnown RBP11.26□□□□□ -0.61
AP003486.1-201ENST00000525716 ARAP1Q96P48 1450 aa11.24□□□□□ -0.61
AP003486.1-201ENST00000525716 DNMBPQ6XZF7 1577 aa11.23□□□□□ -0.61
AP003486.1-201ENST00000525716 RAD54L2Q9Y4B4 1467 aa11.22□□□□□ -0.61
AP003486.1-201ENST00000525716 SNAPC4Q5SXM2 1469 aa11.2□□□□□ -0.62
AP003486.1-201ENST00000525716 TTBK1Q5TCY1 1321 aaPredicted RBP11.2□□□□□ -0.62
AP003486.1-201ENST00000525716 EIF4G3O43432 1585 aaKnown RBP11.2□□□□□ -0.62
AP003486.1-201ENST00000525716 POLA1P09884 1462 aaPredicted RBP11.2□□□□□ -0.62
AP003486.1-201ENST00000525716 GRIN2BQ13224 1484 aa11.2□□□□□ -0.62
AP003486.1-201ENST00000525716 MYT1Q01538 1121 aa11.19□□□□□ -0.62
AP003486.1-201ENST00000525716 SYNJ1O43426 1573 aa11.19□□□□□ -0.62
AP003486.1-201ENST00000525716 GAPVD1Q14C86 1478 aa11.17□□□□□ -0.62
AP003486.1-201ENST00000525716 FAM69CQ0P6D2 419 aa11.16□□□□□ -0.62
AP003486.1-201ENST00000525716 MAGI1Q96QZ7 1491 aaPredicted RBP11.15□□□□□ -0.62
AP003486.1-201ENST00000525716 FAM9AQ8IZU1 332 aaPredicted RBP11.14□□□□□ -0.63
AP003486.1-201ENST00000525716 FGD5Q6ZNL6 1462 aa11.14□□□□□ -0.63
AP003486.1-201ENST00000525716 SYNJ2O15056 1496 aa11.13□□□□□ -0.63
AP003486.1-201ENST00000525716 CHD1O14646 1710 aa11.1□□□□□ -0.63
AP003486.1-201ENST00000525716 JPH4Q96JJ6 628 aa11.08□□□□□ -0.64
AP003486.1-201ENST00000525716 WRNQ14191 1432 aaPredicted RBP eCLIP11.08□□□□□ -0.64
AP003486.1-201ENST00000525716 HRCP23327 699 aa11.05□□□□□ -0.64
AP003486.1-201ENST00000525716 TARBP1Q13395 1621 aaKnown RBP11.03□□□□□ -0.64
AP003486.1-201ENST00000525716 PRDM2Q13029 1718 aa11.03□□□□□ -0.64
AP003486.1-201ENST00000525716 PRG4Q92954 1404 aaPredicted RBP11□□□□□ -0.65
AP003486.1-201ENST00000525716 WDR97A6NE52 1622 aa10.99□□□□□ -0.65
AP003486.1-201ENST00000525716 FHAD1B1AJZ9 1412 aa10.98□□□□□ -0.65
AP003486.1-201ENST00000525716 GRIN2AQ12879 1464 aa10.97□□□□□ -0.65
AP003486.1-201ENST00000525716 CLASP1Q7Z460 1538 aa10.97□□□□□ -0.65
AP003486.1-201ENST00000525716 CUX1P39880 1505 aa10.96□□□□□ -0.66
AP003486.1-201ENST00000525716 ABCA10Q8WWZ4 1543 aa10.93□□□□□ -0.66
AP003486.1-201ENST00000525716 ILDR1Q86SU0 546 aaPredicted RBP10.92□□□□□ -0.66
AP003486.1-201ENST00000525716 PTPRGP23470 1445 aa10.9□□□□□ -0.66
AP003486.1-201ENST00000525716 CARMIL2Q6F5E8 1435 aa10.9□□□□□ -0.66
AP003486.1-201ENST00000525716 CEP170Q5SW79 1584 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 301 ms