RNA–Protein interactions for RNA: ENST00000524930.1

SAMD3-207, Transcript of sterile alpha motif domain containing 3, humanhuman

TSL 1 (best)

Gene SAMD3, Length 929 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD3-207ENST00000524930 AEBP2Q6ZN18 517 aaPredicted RBP23.53■■□□□ 1.36
SAMD3-207ENST00000524930 CHIC1Q5VXU3 224 aa22.17■■□□□ 1.14
SAMD3-207ENST00000524930 NISCHQ9Y2I1 1504 aa21.21■□□□□ 0.99
SAMD3-207ENST00000524930 SENP3Q9H4L4 574 aaPredicted RBP20.34■□□□□ 0.85
SAMD3-207ENST00000524930 PHF23Q9BUL5 403 aaPredicted RBP19.94■□□□□ 0.78
SAMD3-207ENST00000524930 FOXD1Q16676 465 aa18.93■□□□□ 0.62
SAMD3-207ENST00000524930 CCDC180Q9P1Z9 1646 aa18.89■□□□□ 0.61
SAMD3-207ENST00000524930 ABCC9O60706 1549 aa18.87■□□□□ 0.61
SAMD3-207ENST00000524930 POTEDQ86YR6 584 aa18.65■□□□□ 0.58
SAMD3-207ENST00000524930 MSH5O43196 834 aa18.11■□□□□ 0.49
SAMD3-207ENST00000524930 DCAF8L2P0C7V8 631 aa17.95■□□□□ 0.46
SAMD3-207ENST00000524930 RB1CC1Q8TDY2 1594 aa17.95■□□□□ 0.46
SAMD3-207ENST00000524930 NACADO15069 1562 aa17.87■□□□□ 0.45
SAMD3-207ENST00000524930 PABPN1Q86U42 306 aaKnown RBP eCLIP17.66■□□□□ 0.42
SAMD3-207ENST00000524930 DNAJC5BQ9UF47 199 aa17.66■□□□□ 0.42
SAMD3-207ENST00000524930 MYO15BQ96JP2 1530 aa17.65■□□□□ 0.42
SAMD3-207ENST00000524930 ZCCHC6Q5VYS8 1495 aaKnown RBP17.59■□□□□ 0.41
SAMD3-207ENST00000524930 PIAS4Q8N2W9 510 aaPredicted RBP17.58■□□□□ 0.4
SAMD3-207ENST00000524930 UNC13AQ9UPW8 1703 aa17.56■□□□□ 0.4
SAMD3-207ENST00000524930 DCAF1Q9Y4B6 1507 aa17.48■□□□□ 0.39
SAMD3-207ENST00000524930 BICRAQ9NZM4 1560 aa17.47■□□□□ 0.39
SAMD3-207ENST00000524930 SCRIBQ14160 1630 aa17.3■□□□□ 0.36
SAMD3-207ENST00000524930 PLPPR3Q6T4P5 718 aa17.22■□□□□ 0.35
SAMD3-207ENST00000524930 PPP6R1Q9UPN7 881 aa17.16■□□□□ 0.34
SAMD3-207ENST00000524930 SHROOM4Q9ULL8 1493 aa17.15■□□□□ 0.34
SAMD3-207ENST00000524930 ADRA2BP18089 450 aa17.09■□□□□ 0.33
SAMD3-207ENST00000524930 CC2D2AQ9P2K1 1620 aa17.03■□□□□ 0.32
SAMD3-207ENST00000524930 EIF4G1Q04637 1599 aaKnown RBP17.02■□□□□ 0.31
SAMD3-207ENST00000524930 CECR2Q9BXF3 1484 aa16.96■□□□□ 0.31
SAMD3-207ENST00000524930 NCAPD3P42695 1498 aa16.53■□□□□ 0.24
SAMD3-207ENST00000524930 ATAD2BQ9ULI0 1458 aa16.51■□□□□ 0.23
SAMD3-207ENST00000524930 SMARCA4P51532 1647 aa16.5■□□□□ 0.23
SAMD3-207ENST00000524930 SMARCA2P51531 1590 aa16.43■□□□□ 0.22
SAMD3-207ENST00000524930 BAZ1AQ9NRL2 1556 aaPredicted RBP16.43■□□□□ 0.22
SAMD3-207ENST00000524930 HMGXB3Q12766 1538 aa16.37■□□□□ 0.21
SAMD3-207ENST00000524930 MROH2BQ7Z745 1585 aa16.37■□□□□ 0.21
SAMD3-207ENST00000524930 BAZ1BQ9UIG0 1483 aaKnown RBP16.34■□□□□ 0.21
SAMD3-207ENST00000524930 PEG3Q9GZU2 1588 aa16.32■□□□□ 0.2
SAMD3-207ENST00000524930 NESP48681 1621 aa16.27■□□□□ 0.19
SAMD3-207ENST00000524930 ERCC6Q03468 1493 aa16.25■□□□□ 0.19
SAMD3-207ENST00000524930 WIZO95785 1651 aa16.18■□□□□ 0.18
SAMD3-207ENST00000524930 CUX2O14529 1486 aa16.15■□□□□ 0.18
SAMD3-207ENST00000524930 LAMC3Q9Y6N6 1575 aa16.09■□□□□ 0.17
SAMD3-207ENST00000524930 RSF1Q96T23 1441 aaPredicted RBP16.09■□□□□ 0.17
SAMD3-207ENST00000524930 DNAJC5Q9H3Z4 198 aa16.06■□□□□ 0.16
SAMD3-207ENST00000524930 CADPSQ9ULU8 1353 aa16.05■□□□□ 0.16
SAMD3-207ENST00000524930 PDS5BQ9NTI5 1447 aa16.02■□□□□ 0.16
SAMD3-207ENST00000524930 THOC2Q8NI27 1593 aaKnown RBP16■□□□□ 0.15
SAMD3-207ENST00000524930 KIF21AQ7Z4S6 1674 aa16■□□□□ 0.15
SAMD3-207ENST00000524930 DMRT2Q9Y5R5 561 aa15.98■□□□□ 0.15
SAMD3-207ENST00000524930 TOP2AP11388 1531 aaKnown RBP15.94■□□□□ 0.14
SAMD3-207ENST00000524930 CACNB1Q02641 598 aaPredicted RBP15.9■□□□□ 0.14
SAMD3-207ENST00000524930 CFTRP13569 1480 aa15.88■□□□□ 0.13
SAMD3-207ENST00000524930 MRC2Q9UBG0 1479 aa15.87■□□□□ 0.13
SAMD3-207ENST00000524930 MAPK8IP2Q13387 824 aaPredicted RBP15.87■□□□□ 0.13
SAMD3-207ENST00000524930 FANCD2Q9BXW9 1451 aa15.86■□□□□ 0.13
SAMD3-207ENST00000524930 SCAF1Q9H7N4 1312 aaKnown RBP15.86■□□□□ 0.13
SAMD3-207ENST00000524930 CEP164Q9UPV0 1460 aa15.84■□□□□ 0.13
SAMD3-207ENST00000524930 CCDC88BA6NC98 1476 aa15.82■□□□□ 0.12
SAMD3-207ENST00000524930 WDR62O43379 1518 aa15.82■□□□□ 0.12
SAMD3-207ENST00000524930 URB2Q14146 1524 aaKnown RBP15.73■□□□□ 0.11
SAMD3-207ENST00000524930 PRDM2Q13029 1718 aa15.65■□□□□ 0.1
SAMD3-207ENST00000524930 TOPBP1Q92547 1522 aa15.57■□□□□ 0.08
SAMD3-207ENST00000524930 SUPT5HO00267 1087 aaKnown RBP15.55■□□□□ 0.08
SAMD3-207ENST00000524930 ZNF608Q9ULD9 1512 aaPredicted RBP15.53■□□□□ 0.08
SAMD3-207ENST00000524930 IFT140Q96RY7 1462 aa15.52■□□□□ 0.07
SAMD3-207ENST00000524930 ABCC8Q09428 1581 aa15.5■□□□□ 0.07
SAMD3-207ENST00000524930 OSCARQ8IYS5 282 aa15.5■□□□□ 0.07
SAMD3-207ENST00000524930 DNMBPQ6XZF7 1577 aa15.49■□□□□ 0.07
SAMD3-207ENST00000524930 TRIM41Q8WV44 630 aa15.44■□□□□ 0.06
SAMD3-207ENST00000524930 AQRO60306 1485 aaKnown RBP eCLIP15.42■□□□□ 0.06
SAMD3-207ENST00000524930 POLA1P09884 1462 aaPredicted RBP15.42■□□□□ 0.06
SAMD3-207ENST00000524930 TARBP1Q13395 1621 aaKnown RBP15.41■□□□□ 0.06
SAMD3-207ENST00000524930 RAD54L2Q9Y4B4 1467 aa15.4■□□□□ 0.06
SAMD3-207ENST00000524930 EIF4G3O43432 1585 aaKnown RBP15.39■□□□□ 0.05
SAMD3-207ENST00000524930 SOGA1O94964 1423 aa15.38■□□□□ 0.05
SAMD3-207ENST00000524930 DCAF8L1A6NGE4 600 aa15.38■□□□□ 0.05
SAMD3-207ENST00000524930 CUX1P39880 1505 aa15.36■□□□□ 0.05
SAMD3-207ENST00000524930 TDRD9Q8NDG6 1382 aaKnown RBP15.36■□□□□ 0.05
SAMD3-207ENST00000524930 FGD5Q6ZNL6 1462 aa15.34■□□□□ 0.05
SAMD3-207ENST00000524930 FBLN2P98095 1184 aa15.31■□□□□ 0.04
SAMD3-207ENST00000524930 RNF39Q9H2S5 420 aa15.31■□□□□ 0.04
SAMD3-207ENST00000524930 CHD1O14646 1710 aa15.25■□□□□ 0.03
SAMD3-207ENST00000524930 RIMBP3CA6NJZ7 1639 aa15.24■□□□□ 0.03
SAMD3-207ENST00000524930 RIMBP3BA6NNM3 1639 aa15.24■□□□□ 0.03
SAMD3-207ENST00000524930 RIMBP3Q9UFD9 1639 aa15.24■□□□□ 0.03
SAMD3-207ENST00000524930 SNAPC4Q5SXM2 1469 aa15.22■□□□□ 0.03
SAMD3-207ENST00000524930 ARHGEF11O15085 1522 aa15.22■□□□□ 0.03
SAMD3-207ENST00000524930 WDR97A6NE52 1622 aa15.19■□□□□ 0.02
SAMD3-207ENST00000524930 CHMP7Q8WUX9 453 aaPredicted RBP15.19■□□□□ 0.02
SAMD3-207ENST00000524930 GRIN2BQ13224 1484 aa15.19■□□□□ 0.02
SAMD3-207ENST00000524930 GAPVD1Q14C86 1478 aa15.18■□□□□ 0.02
SAMD3-207ENST00000524930 ABCA10Q8WWZ4 1543 aa15.17■□□□□ 0.02
SAMD3-207ENST00000524930 CYB5RLQ6IPT4 315 aa15.16■□□□□ 0.02
SAMD3-207ENST00000524930 WRNQ14191 1432 aaPredicted RBP eCLIP15.16■□□□□ 0.02
SAMD3-207ENST00000524930 MAGI1Q96QZ7 1491 aaPredicted RBP15.15■□□□□ 0.02
SAMD3-207ENST00000524930 HOXD11P31277 338 aaPredicted RBP15.15■□□□□ 0.02
SAMD3-207ENST00000524930 SYNJ1O43426 1573 aa15.13■□□□□ 0.01
SAMD3-207ENST00000524930 C1QBPQ07021 282 aaKnown RBP15.13■□□□□ 0.01
SAMD3-207ENST00000524930 TOP2BQ02880 1626 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms