RNA–Protein interactions for RNA: ENST00000524843.5

CASP4-204, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 978 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-204ENST00000524843 AEBP2Q6ZN18 517 aaPredicted RBP16.78■□□□□ 0.28
CASP4-204ENST00000524843 CHIC1Q5VXU3 224 aa16.66■□□□□ 0.26
CASP4-204ENST00000524843 NISCHQ9Y2I1 1504 aa16.54■□□□□ 0.24
CASP4-204ENST00000524843 PHF23Q9BUL5 403 aaPredicted RBP14.52□□□□□ -0.09
CASP4-204ENST00000524843 CCDC180Q9P1Z9 1646 aa14.48□□□□□ -0.09
CASP4-204ENST00000524843 SENP3Q9H4L4 574 aaPredicted RBP14.45□□□□□ -0.1
CASP4-204ENST00000524843 ZCCHC6Q5VYS8 1495 aaKnown RBP13.98□□□□□ -0.17
CASP4-204ENST00000524843 DCAF1Q9Y4B6 1507 aa13.8□□□□□ -0.2
CASP4-204ENST00000524843 PLPPR3Q6T4P5 718 aa13.67□□□□□ -0.22
CASP4-204ENST00000524843 MYO15BQ96JP2 1530 aa13.59□□□□□ -0.23
CASP4-204ENST00000524843 SHROOM4Q9ULL8 1493 aa13.4□□□□□ -0.26
CASP4-204ENST00000524843 NACADO15069 1562 aa13.38□□□□□ -0.27
CASP4-204ENST00000524843 DCAF8L2P0C7V8 631 aa13.29□□□□□ -0.28
CASP4-204ENST00000524843 ABCC9O60706 1549 aa13.25□□□□□ -0.29
CASP4-204ENST00000524843 FOXD1Q16676 465 aa13.24□□□□□ -0.29
CASP4-204ENST00000524843 RB1CC1Q8TDY2 1594 aa13.2□□□□□ -0.3
CASP4-204ENST00000524843 SCRIBQ14160 1630 aa13.17□□□□□ -0.3
CASP4-204ENST00000524843 SUPT5HO00267 1087 aaKnown RBP12.97□□□□□ -0.33
CASP4-204ENST00000524843 UNC13AQ9UPW8 1703 aa12.9□□□□□ -0.34
CASP4-204ENST00000524843 RSF1Q96T23 1441 aaPredicted RBP12.84□□□□□ -0.35
CASP4-204ENST00000524843 POTEDQ86YR6 584 aa12.81□□□□□ -0.36
CASP4-204ENST00000524843 BAZ1AQ9NRL2 1556 aaPredicted RBP12.81□□□□□ -0.36
CASP4-204ENST00000524843 ADRA2BP18089 450 aa12.76□□□□□ -0.37
CASP4-204ENST00000524843 PPP6R1Q9UPN7 881 aa12.73□□□□□ -0.37
CASP4-204ENST00000524843 MROH2BQ7Z745 1585 aa12.72□□□□□ -0.37
CASP4-204ENST00000524843 BICRAQ9NZM4 1560 aa12.72□□□□□ -0.37
CASP4-204ENST00000524843 CECR2Q9BXF3 1484 aa12.72□□□□□ -0.37
CASP4-204ENST00000524843 SMARCA4P51532 1647 aa12.7□□□□□ -0.38
CASP4-204ENST00000524843 WIZO95785 1651 aa12.64□□□□□ -0.39
CASP4-204ENST00000524843 TOP2AP11388 1531 aaKnown RBP12.62□□□□□ -0.39
CASP4-204ENST00000524843 PEG3Q9GZU2 1588 aa12.6□□□□□ -0.39
CASP4-204ENST00000524843 PIAS4Q8N2W9 510 aaPredicted RBP12.58□□□□□ -0.4
CASP4-204ENST00000524843 EIF4G1Q04637 1599 aaKnown RBP12.5□□□□□ -0.41
CASP4-204ENST00000524843 SMARCA2P51531 1590 aa12.49□□□□□ -0.41
CASP4-204ENST00000524843 PABPN1Q86U42 306 aaKnown RBP eCLIP12.41□□□□□ -0.42
CASP4-204ENST00000524843 ATAD2BQ9ULI0 1458 aa12.39□□□□□ -0.43
CASP4-204ENST00000524843 HMGXB3Q12766 1538 aa12.37□□□□□ -0.43
CASP4-204ENST00000524843 CCDC88BA6NC98 1476 aa12.37□□□□□ -0.43
CASP4-204ENST00000524843 MSH5O43196 834 aa12.36□□□□□ -0.43
CASP4-204ENST00000524843 BAZ1BQ9UIG0 1483 aaKnown RBP12.35□□□□□ -0.43
CASP4-204ENST00000524843 NCAPD3P42695 1498 aa12.27□□□□□ -0.44
CASP4-204ENST00000524843 TRIM41Q8WV44 630 aa12.27□□□□□ -0.45
CASP4-204ENST00000524843 EEA1Q15075 1411 aa12.17□□□□□ -0.46
CASP4-204ENST00000524843 PRDM2Q13029 1718 aa12.17□□□□□ -0.46
CASP4-204ENST00000524843 ABCC8Q09428 1581 aa12.15□□□□□ -0.46
CASP4-204ENST00000524843 WRNQ14191 1432 aaPredicted RBP eCLIP12.12□□□□□ -0.47
CASP4-204ENST00000524843 CC2D2AQ9P2K1 1620 aa12.08□□□□□ -0.48
CASP4-204ENST00000524843 BIVM-ERCC5R4GMW8 1640 aa12.08□□□□□ -0.48
CASP4-204ENST00000524843 TOP2BQ02880 1626 aa12.06□□□□□ -0.48
CASP4-204ENST00000524843 CFTRP13569 1480 aa12.06□□□□□ -0.48
CASP4-204ENST00000524843 SYNJ1O43426 1573 aa12.05□□□□□ -0.48
CASP4-204ENST00000524843 KIF21BO75037 1637 aa11.99□□□□□ -0.49
CASP4-204ENST00000524843 LOC105371045A0A1W2PR82 267 aa11.98□□□□□ -0.49
CASP4-204ENST00000524843 SCAF1Q9H7N4 1312 aaKnown RBP11.97□□□□□ -0.49
CASP4-204ENST00000524843 PPP4R3CPQ6ZMV5 832 aa11.96□□□□□ -0.49
CASP4-204ENST00000524843 GOLGA3Q08378 1498 aa11.95□□□□□ -0.5
CASP4-204ENST00000524843 CEP164Q9UPV0 1460 aa11.94□□□□□ -0.5
CASP4-204ENST00000524843 CADPSQ9ULU8 1353 aa11.93□□□□□ -0.5
CASP4-204ENST00000524843 SOGA1O94964 1423 aa11.93□□□□□ -0.5
CASP4-204ENST00000524843 FAM9AQ8IZU1 332 aaPredicted RBP11.92□□□□□ -0.5
CASP4-204ENST00000524843 CUX1P39880 1505 aa11.91□□□□□ -0.5
CASP4-204ENST00000524843 TNIKQ9UKE5 1360 aa11.9□□□□□ -0.5
CASP4-204ENST00000524843 LAMC3Q9Y6N6 1575 aa11.89□□□□□ -0.51
CASP4-204ENST00000524843 ERICH3Q5RHP9 1530 aa11.88□□□□□ -0.51
CASP4-204ENST00000524843 CSRNP3Q8WYN3 585 aa11.87□□□□□ -0.51
CASP4-204ENST00000524843 NCBP3Q53F19 620 aaKnown RBP11.84□□□□□ -0.51
CASP4-204ENST00000524843 CEP162Q5TB80 1403 aa11.84□□□□□ -0.51
CASP4-204ENST00000524843 RUSC2Q8N2Y8 1516 aa11.83□□□□□ -0.52
CASP4-204ENST00000524843 DNMBPQ6XZF7 1577 aa11.83□□□□□ -0.52
CASP4-204ENST00000524843 KIF27Q86VH2 1401 aa11.82□□□□□ -0.52
CASP4-204ENST00000524843 FANCD2Q9BXW9 1451 aa11.82□□□□□ -0.52
CASP4-204ENST00000524843 PRXQ9BXM0 1461 aa11.78□□□□□ -0.52
CASP4-204ENST00000524843 TRIM26Q12899 539 aaPredicted RBP11.78□□□□□ -0.52
CASP4-204ENST00000524843 FGD5Q6ZNL6 1462 aa11.76□□□□□ -0.53
CASP4-204ENST00000524843 KCNA4P22459 653 aa11.74□□□□□ -0.53
CASP4-204ENST00000524843 PDS5BQ9NTI5 1447 aa11.74□□□□□ -0.53
CASP4-204ENST00000524843 RAPGEF2Q9Y4G8 1499 aa11.73□□□□□ -0.53
CASP4-204ENST00000524843 TOPBP1Q92547 1522 aa11.72□□□□□ -0.53
CASP4-204ENST00000524843 ABCA10Q8WWZ4 1543 aa11.71□□□□□ -0.53
CASP4-204ENST00000524843 WDR97A6NE52 1622 aa11.71□□□□□ -0.54
CASP4-204ENST00000524843 CUX2O14529 1486 aa11.7□□□□□ -0.54
CASP4-204ENST00000524843 CLIP1P30622 1438 aa11.7□□□□□ -0.54
CASP4-204ENST00000524843 UBTFP17480 764 aaKnown RBP11.7□□□□□ -0.54
CASP4-204ENST00000524843 PCGF6Q9BYE7 350 aa11.7□□□□□ -0.54
CASP4-204ENST00000524843 CUL7Q14999 1698 aa11.69□□□□□ -0.54
CASP4-204ENST00000524843 CNKSR2Q8WXI2 1034 aa11.69□□□□□ -0.54
CASP4-204ENST00000524843 NESP48681 1621 aa11.68□□□□□ -0.54
CASP4-204ENST00000524843 POLA1P09884 1462 aaPredicted RBP11.67□□□□□ -0.54
CASP4-204ENST00000524843 VPS8Q8N3P4 1428 aa11.67□□□□□ -0.54
CASP4-204ENST00000524843 KIF21AQ7Z4S6 1674 aa11.65□□□□□ -0.54
CASP4-204ENST00000524843 EHMT2Q96KQ7 1210 aa11.65□□□□□ -0.54
CASP4-204ENST00000524843 HRCP23327 699 aa11.64□□□□□ -0.55
CASP4-204ENST00000524843 URB2Q14146 1524 aaKnown RBP11.64□□□□□ -0.55
CASP4-204ENST00000524843 ABCA5Q8WWZ7 1642 aa11.62□□□□□ -0.55
CASP4-204ENST00000524843 MRC2Q9UBG0 1479 aa11.59□□□□□ -0.55
CASP4-204ENST00000524843 IGF1RP08069 1367 aa11.59□□□□□ -0.55
CASP4-204ENST00000524843 CARMIL1Q5VZK9 1371 aa11.57□□□□□ -0.56
CASP4-204ENST00000524843 ARAP1Q96P48 1450 aa11.57□□□□□ -0.56
CASP4-204ENST00000524843 CTTNBP2Q8WZ74 1663 aa11.56□□□□□ -0.56
CASP4-204ENST00000524843 EFCAB5A4FU69 1503 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms