RNA–Protein interactions for RNA: ENST00000524826.5

ME3-203, Transcript of malic enzyme 3, humanhuman

TSL 1 (best)

Gene ME3, Length 2,069 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ME3-203ENST00000524826 NISCHQ9Y2I1 1504 aa47.92■■■■■ 5.26
ME3-203ENST00000524826 CCDC180Q9P1Z9 1646 aa41.91■■■■■ 4.3
ME3-203ENST00000524826 ZCCHC6Q5VYS8 1495 aaKnown RBP40.22■■■■■ 4.03
ME3-203ENST00000524826 ABCC9O60706 1549 aa39.79■■■■□ 3.96
ME3-203ENST00000524826 DCAF1Q9Y4B6 1507 aa39.65■■■■□ 3.94
ME3-203ENST00000524826 DCAF8L2P0C7V8 631 aa39.58■■■■□ 3.93
ME3-203ENST00000524826 MYO15BQ96JP2 1530 aa39.27■■■■□ 3.88
ME3-203ENST00000524826 NACADO15069 1562 aa39.08■■■■□ 3.85
ME3-203ENST00000524826 SHROOM4Q9ULL8 1493 aa38.88■■■■□ 3.81
ME3-203ENST00000524826 RB1CC1Q8TDY2 1594 aa38.79■■■■□ 3.8
ME3-203ENST00000524826 SCRIBQ14160 1630 aa38.48■■■■□ 3.75
ME3-203ENST00000524826 UNC13AQ9UPW8 1703 aa37.98■■■■□ 3.67
ME3-203ENST00000524826 BICRAQ9NZM4 1560 aa37.62■■■■□ 3.61
ME3-203ENST00000524826 PABPN1Q86U42 306 aaKnown RBP eCLIP37.46■■■■□ 3.59
ME3-203ENST00000524826 SUPT5HO00267 1087 aaKnown RBP37.29■■■■□ 3.56
ME3-203ENST00000524826 CECR2Q9BXF3 1484 aa37.24■■■■□ 3.55
ME3-203ENST00000524826 RSF1Q96T23 1441 aaPredicted RBP37.08■■■■□ 3.53
ME3-203ENST00000524826 BAZ1AQ9NRL2 1556 aaPredicted RBP37.03■■■■□ 3.52
ME3-203ENST00000524826 MROH2BQ7Z745 1585 aa37.01■■■■□ 3.51
ME3-203ENST00000524826 SMARCA4P51532 1647 aa36.89■■■■□ 3.5
ME3-203ENST00000524826 WIZO95785 1651 aa36.68■■■■□ 3.46
ME3-203ENST00000524826 EIF4G1Q04637 1599 aaKnown RBP36.51■■■■□ 3.44
ME3-203ENST00000524826 PEG3Q9GZU2 1588 aa36.47■■■■□ 3.43
ME3-203ENST00000524826 ATAD2BQ9ULI0 1458 aa36.34■■■■□ 3.41
ME3-203ENST00000524826 TOP2AP11388 1531 aaKnown RBP36.32■■■■□ 3.4
ME3-203ENST00000524826 SMARCA2P51531 1590 aa36.31■■■■□ 3.4
ME3-203ENST00000524826 BAZ1BQ9UIG0 1483 aaKnown RBP36.11■■■■□ 3.37
ME3-203ENST00000524826 NCAPD3P42695 1498 aa36.07■■■■□ 3.36
ME3-203ENST00000524826 CC2D2AQ9P2K1 1620 aa36.02■■■■□ 3.36
ME3-203ENST00000524826 HMGXB3Q12766 1538 aa36.01■■■■□ 3.35
ME3-203ENST00000524826 CCDC88BA6NC98 1476 aa35.93■■■■□ 3.34
ME3-203ENST00000524826 CHIC1Q5VXU3 224 aa35.61■■■■□ 3.29
ME3-203ENST00000524826 DNAJC5BQ9UF47 199 aa35.27■■■■□ 3.24
ME3-203ENST00000524826 CFTRP13569 1480 aa35.21■■■■□ 3.23
ME3-203ENST00000524826 CADPSQ9ULU8 1353 aa35.12■■■■□ 3.21
ME3-203ENST00000524826 TRIM41Q8WV44 630 aa35.1■■■■□ 3.21
ME3-203ENST00000524826 ABCC8Q09428 1581 aa35.1■■■■□ 3.21
ME3-203ENST00000524826 PRDM2Q13029 1718 aa35■■■■□ 3.19
ME3-203ENST00000524826 WRNQ14191 1432 aaPredicted RBP eCLIP34.92■■■■□ 3.18
ME3-203ENST00000524826 LAMC3Q9Y6N6 1575 aa34.88■■■■□ 3.17
ME3-203ENST00000524826 NESP48681 1621 aa34.87■■■■□ 3.17
ME3-203ENST00000524826 SYNJ1O43426 1573 aa34.78■■■■□ 3.16
ME3-203ENST00000524826 FANCD2Q9BXW9 1451 aa34.73■■■■□ 3.15
ME3-203ENST00000524826 TOP2BQ02880 1626 aa34.66■■■■□ 3.14
ME3-203ENST00000524826 BIVM-ERCC5R4GMW8 1640 aa34.64■■■■□ 3.14
ME3-203ENST00000524826 CUX1P39880 1505 aa34.62■■■■□ 3.13
ME3-203ENST00000524826 PDS5BQ9NTI5 1447 aa34.6■■■■□ 3.13
ME3-203ENST00000524826 CEP164Q9UPV0 1460 aa34.53■■■■□ 3.12
ME3-203ENST00000524826 KIF21AQ7Z4S6 1674 aa34.45■■■■□ 3.11
ME3-203ENST00000524826 FAM9AQ8IZU1 332 aaPredicted RBP34.43■■■■□ 3.1
ME3-203ENST00000524826 SOGA1O94964 1423 aa34.39■■■■□ 3.1
ME3-203ENST00000524826 DNMBPQ6XZF7 1577 aa34.39■■■■□ 3.1
ME3-203ENST00000524826 TOPBP1Q92547 1522 aa34.33■■■■□ 3.09
ME3-203ENST00000524826 URB2Q14146 1524 aaKnown RBP34.31■■■■□ 3.08
ME3-203ENST00000524826 EEA1Q15075 1411 aa34.3■■■■□ 3.08
ME3-203ENST00000524826 RUSC2Q8N2Y8 1516 aa34.28■■■■□ 3.08
ME3-203ENST00000524826 FGD5Q6ZNL6 1462 aa34.27■■■■□ 3.08
ME3-203ENST00000524826 LOC105371045A0A1W2PR82 267 aa34.21■■■■□ 3.07
ME3-203ENST00000524826 MRC2Q9UBG0 1479 aa34.18■■■■□ 3.06
ME3-203ENST00000524826 POLA1P09884 1462 aaPredicted RBP34.15■■■■□ 3.06
ME3-203ENST00000524826 ERCC6Q03468 1493 aa34.14■■■■□ 3.06
ME3-203ENST00000524826 CSRNP3Q8WYN3 585 aa34.11■■■■□ 3.05
ME3-203ENST00000524826 KIF27Q86VH2 1401 aa34.05■■■■□ 3.04
ME3-203ENST00000524826 HRCP23327 699 aa34.02■■■■□ 3.04
ME3-203ENST00000524826 RAD54L2Q9Y4B4 1467 aa34.02■■■■□ 3.04
ME3-203ENST00000524826 WDR62O43379 1518 aa34.02■■■■□ 3.04
ME3-203ENST00000524826 CUX2O14529 1486 aa34■■■■□ 3.03
ME3-203ENST00000524826 ABCA10Q8WWZ4 1543 aa33.98■■■■□ 3.03
ME3-203ENST00000524826 THOC2Q8NI27 1593 aaKnown RBP33.96■■■■□ 3.03
ME3-203ENST00000524826 EHMT2Q96KQ7 1210 aa33.93■■■■□ 3.02
ME3-203ENST00000524826 WDR97A6NE52 1622 aa33.89■■■■□ 3.02
ME3-203ENST00000524826 KIF21BO75037 1637 aa33.87■■■■□ 3.01
ME3-203ENST00000524826 TARBP1Q13395 1621 aaKnown RBP33.84■■■■□ 3.01
ME3-203ENST00000524826 GOLGA3Q08378 1498 aa33.81■■■■□ 3
ME3-203ENST00000524826 PRXQ9BXM0 1461 aa33.78■■■■□ 3
ME3-203ENST00000524826 IGF1RP08069 1367 aa33.76■■■■□ 3
ME3-203ENST00000524826 IFT140Q96RY7 1462 aa33.73■■■□□ 2.99
ME3-203ENST00000524826 ABCA5Q8WWZ7 1642 aa33.72■■■□□ 2.99
ME3-203ENST00000524826 RAPGEF2Q9Y4G8 1499 aa33.71■■■□□ 2.99
ME3-203ENST00000524826 TDRD9Q8NDG6 1382 aaKnown RBP33.7■■■□□ 2.99
ME3-203ENST00000524826 ERICH3Q5RHP9 1530 aa33.69■■■□□ 2.98
ME3-203ENST00000524826 PCGF6Q9BYE7 350 aa33.67■■■□□ 2.98
ME3-203ENST00000524826 TNIKQ9UKE5 1360 aa33.66■■■□□ 2.98
ME3-203ENST00000524826 GAPVD1Q14C86 1478 aa33.65■■■□□ 2.98
ME3-203ENST00000524826 UBTFP17480 764 aaKnown RBP33.64■■■□□ 2.98
ME3-203ENST00000524826 CARMIL1Q5VZK9 1371 aa33.59■■■□□ 2.97
ME3-203ENST00000524826 ZNF608Q9ULD9 1512 aaPredicted RBP33.54■■■□□ 2.96
ME3-203ENST00000524826 CUL7Q14999 1698 aa33.54■■■□□ 2.96
ME3-203ENST00000524826 AQRO60306 1485 aaKnown RBP eCLIP33.53■■■□□ 2.96
ME3-203ENST00000524826 PBRM1Q86U86 1689 aa33.48■■■□□ 2.95
ME3-203ENST00000524826 CEP162Q5TB80 1403 aa33.46■■■□□ 2.95
ME3-203ENST00000524826 EIF4G3O43432 1585 aaKnown RBP33.44■■■□□ 2.94
ME3-203ENST00000524826 GRIN2BQ13224 1484 aa33.43■■■□□ 2.94
ME3-203ENST00000524826 ADAMTS12P58397 1594 aa33.3■■■□□ 2.92
ME3-203ENST00000524826 FHAD1B1AJZ9 1412 aa33.29■■■□□ 2.92
ME3-203ENST00000524826 CLIP1P30622 1438 aa33.26■■■□□ 2.91
ME3-203ENST00000524826 SNAPC4Q5SXM2 1469 aa33.23■■■□□ 2.91
ME3-203ENST00000524826 MAGI1Q96QZ7 1491 aaPredicted RBP33.18■■■□□ 2.9
ME3-203ENST00000524826 RANGAP1P46060 587 aaPredicted RBP33.14■■■□□ 2.9
ME3-203ENST00000524826 TRIM26Q12899 539 aaPredicted RBP33.13■■■□□ 2.89
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms