RNA–Protein interactions for RNA: ENST00000524467.1

AP000842.1-201, humanhuman

BASIC

Gene AP000842.1, Length 698 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000842.1-201ENST00000524467 AEBP2Q6ZN18 517 aaPredicted RBP32.03■■■□□ 2.72
AP000842.1-201ENST00000524467 CHIC1Q5VXU3 224 aa29.99■■■□□ 2.39
AP000842.1-201ENST00000524467 NISCHQ9Y2I1 1504 aa28.02■■■□□ 2.08
AP000842.1-201ENST00000524467 SENP3Q9H4L4 574 aaPredicted RBP27.37■■□□□ 1.97
AP000842.1-201ENST00000524467 PHF23Q9BUL5 403 aaPredicted RBP26.95■■□□□ 1.9
AP000842.1-201ENST00000524467 FOXD1Q16676 465 aa25.58■■□□□ 1.69
AP000842.1-201ENST00000524467 ABCC9O60706 1549 aa25.36■■□□□ 1.65
AP000842.1-201ENST00000524467 CCDC180Q9P1Z9 1646 aa25.27■■□□□ 1.64
AP000842.1-201ENST00000524467 POTEDQ86YR6 584 aa24.24■■□□□ 1.47
AP000842.1-201ENST00000524467 RB1CC1Q8TDY2 1594 aa24.15■■□□□ 1.46
AP000842.1-201ENST00000524467 MSH5O43196 834 aa24.08■■□□□ 1.45
AP000842.1-201ENST00000524467 DCAF8L2P0C7V8 631 aa23.93■■□□□ 1.42
AP000842.1-201ENST00000524467 NACADO15069 1562 aa23.91■■□□□ 1.42
AP000842.1-201ENST00000524467 PIAS4Q8N2W9 510 aaPredicted RBP23.8■■□□□ 1.4
AP000842.1-201ENST00000524467 PLPPR3Q6T4P5 718 aa23.76■■□□□ 1.39
AP000842.1-201ENST00000524467 DNAJC5BQ9UF47 199 aa23.71■■□□□ 1.39
AP000842.1-201ENST00000524467 PPP6R1Q9UPN7 881 aa23.59■■□□□ 1.37
AP000842.1-201ENST00000524467 PABPN1Q86U42 306 aaKnown RBP eCLIP23.58■■□□□ 1.37
AP000842.1-201ENST00000524467 UNC13AQ9UPW8 1703 aa23.51■■□□□ 1.35
AP000842.1-201ENST00000524467 ADRA2BP18089 450 aa23.49■■□□□ 1.35
AP000842.1-201ENST00000524467 MYO15BQ96JP2 1530 aa23.48■■□□□ 1.35
AP000842.1-201ENST00000524467 BICRAQ9NZM4 1560 aa23.26■■□□□ 1.31
AP000842.1-201ENST00000524467 ZCCHC6Q5VYS8 1495 aaKnown RBP23.18■■□□□ 1.3
AP000842.1-201ENST00000524467 DCAF1Q9Y4B6 1507 aa23.13■■□□□ 1.29
AP000842.1-201ENST00000524467 SHROOM4Q9ULL8 1493 aa23.07■■□□□ 1.28
AP000842.1-201ENST00000524467 SCRIBQ14160 1630 aa23.02■■□□□ 1.28
AP000842.1-201ENST00000524467 CC2D2AQ9P2K1 1620 aa22.9■■□□□ 1.26
AP000842.1-201ENST00000524467 CECR2Q9BXF3 1484 aa22.86■■□□□ 1.25
AP000842.1-201ENST00000524467 EIF4G1Q04637 1599 aaKnown RBP22.8■■□□□ 1.24
AP000842.1-201ENST00000524467 ERCC6Q03468 1493 aa22.03■■□□□ 1.12
AP000842.1-201ENST00000524467 NCAPD3P42695 1498 aa22.01■■□□□ 1.11
AP000842.1-201ENST00000524467 DNAJC5Q9H3Z4 198 aa21.99■■□□□ 1.11
AP000842.1-201ENST00000524467 SMARCA2P51531 1590 aa21.96■■□□□ 1.11
AP000842.1-201ENST00000524467 CUX2O14529 1486 aa21.93■■□□□ 1.1
AP000842.1-201ENST00000524467 ATAD2BQ9ULI0 1458 aa21.93■■□□□ 1.1
AP000842.1-201ENST00000524467 SMARCA4P51532 1647 aa21.91■■□□□ 1.1
AP000842.1-201ENST00000524467 HMGXB3Q12766 1538 aa21.88■■□□□ 1.09
AP000842.1-201ENST00000524467 BAZ1AQ9NRL2 1556 aaPredicted RBP21.84■■□□□ 1.09
AP000842.1-201ENST00000524467 BAZ1BQ9UIG0 1483 aaKnown RBP21.81■■□□□ 1.08
AP000842.1-201ENST00000524467 MAPK8IP2Q13387 824 aaPredicted RBP21.7■■□□□ 1.06
AP000842.1-201ENST00000524467 NESP48681 1621 aa21.69■■□□□ 1.06
AP000842.1-201ENST00000524467 PEG3Q9GZU2 1588 aa21.65■■□□□ 1.06
AP000842.1-201ENST00000524467 DMRT2Q9Y5R5 561 aa21.64■■□□□ 1.05
AP000842.1-201ENST00000524467 LAMC3Q9Y6N6 1575 aa21.61■■□□□ 1.05
AP000842.1-201ENST00000524467 MROH2BQ7Z745 1585 aa21.56■■□□□ 1.04
AP000842.1-201ENST00000524467 PDS5BQ9NTI5 1447 aa21.54■■□□□ 1.04
AP000842.1-201ENST00000524467 THOC2Q8NI27 1593 aaKnown RBP21.5■■□□□ 1.03
AP000842.1-201ENST00000524467 KIF21AQ7Z4S6 1674 aa21.48■■□□□ 1.03
AP000842.1-201ENST00000524467 SCAF1Q9H7N4 1312 aaKnown RBP21.46■■□□□ 1.03
AP000842.1-201ENST00000524467 CADPSQ9ULU8 1353 aa21.38■■□□□ 1.01
AP000842.1-201ENST00000524467 WIZO95785 1651 aa21.35■■□□□ 1.01
AP000842.1-201ENST00000524467 MRC2Q9UBG0 1479 aa21.3■■□□□ 1
AP000842.1-201ENST00000524467 CEP164Q9UPV0 1460 aa21.23■□□□□ 0.99
AP000842.1-201ENST00000524467 WDR62O43379 1518 aa21.2■□□□□ 0.98
AP000842.1-201ENST00000524467 FANCD2Q9BXW9 1451 aa21.15■□□□□ 0.98
AP000842.1-201ENST00000524467 TRIM41Q8WV44 630 aa21.12■□□□□ 0.97
AP000842.1-201ENST00000524467 TOP2AP11388 1531 aaKnown RBP21.09■□□□□ 0.97
AP000842.1-201ENST00000524467 CFTRP13569 1480 aa21.07■□□□□ 0.96
AP000842.1-201ENST00000524467 RSF1Q96T23 1441 aaPredicted RBP21.07■□□□□ 0.96
AP000842.1-201ENST00000524467 OSCARQ8IYS5 282 aa20.97■□□□□ 0.95
AP000842.1-201ENST00000524467 PRDM2Q13029 1718 aa20.97■□□□□ 0.95
AP000842.1-201ENST00000524467 CACNB1Q02641 598 aaPredicted RBP20.92■□□□□ 0.94
AP000842.1-201ENST00000524467 URB2Q14146 1524 aaKnown RBP20.91■□□□□ 0.94
AP000842.1-201ENST00000524467 CCDC88BA6NC98 1476 aa20.81■□□□□ 0.92
AP000842.1-201ENST00000524467 IFT140Q96RY7 1462 aa20.79■□□□□ 0.92
AP000842.1-201ENST00000524467 PPP4R3CPQ6ZMV5 832 aa20.78■□□□□ 0.92
AP000842.1-201ENST00000524467 ABCC8Q09428 1581 aa20.77■□□□□ 0.92
AP000842.1-201ENST00000524467 DCAF8L1A6NGE4 600 aa20.77■□□□□ 0.92
AP000842.1-201ENST00000524467 TOPBP1Q92547 1522 aa20.72■□□□□ 0.91
AP000842.1-201ENST00000524467 HOXD11P31277 338 aaPredicted RBP20.68■□□□□ 0.9
AP000842.1-201ENST00000524467 ZNF608Q9ULD9 1512 aaPredicted RBP20.67■□□□□ 0.9
AP000842.1-201ENST00000524467 DNMBPQ6XZF7 1577 aa20.66■□□□□ 0.9
AP000842.1-201ENST00000524467 RIMBP3CA6NJZ7 1639 aa20.63■□□□□ 0.89
AP000842.1-201ENST00000524467 RIMBP3BA6NNM3 1639 aa20.63■□□□□ 0.89
AP000842.1-201ENST00000524467 RIMBP3Q9UFD9 1639 aa20.63■□□□□ 0.89
AP000842.1-201ENST00000524467 EIF4G3O43432 1585 aaKnown RBP20.63■□□□□ 0.89
AP000842.1-201ENST00000524467 FBLN2P98095 1184 aa20.58■□□□□ 0.89
AP000842.1-201ENST00000524467 ARHGEF11O15085 1522 aa20.54■□□□□ 0.88
AP000842.1-201ENST00000524467 RNF39Q9H2S5 420 aa20.52■□□□□ 0.88
AP000842.1-201ENST00000524467 CHD1O14646 1710 aa20.52■□□□□ 0.88
AP000842.1-201ENST00000524467 AQRO60306 1485 aaKnown RBP eCLIP20.51■□□□□ 0.87
AP000842.1-201ENST00000524467 TARBP1Q13395 1621 aaKnown RBP20.49■□□□□ 0.87
AP000842.1-201ENST00000524467 CNKSR2Q8WXI2 1034 aa20.48■□□□□ 0.87
AP000842.1-201ENST00000524467 POLA1P09884 1462 aaPredicted RBP20.48■□□□□ 0.87
AP000842.1-201ENST00000524467 CYB5RLQ6IPT4 315 aa20.47■□□□□ 0.87
AP000842.1-201ENST00000524467 SOGA1O94964 1423 aa20.45■□□□□ 0.86
AP000842.1-201ENST00000524467 RNF216Q9NWF9 866 aaPredicted RBP20.41■□□□□ 0.86
AP000842.1-201ENST00000524467 RAD54L2Q9Y4B4 1467 aa20.41■□□□□ 0.86
AP000842.1-201ENST00000524467 TRHP20396 242 aaPredicted RBP20.4■□□□□ 0.86
AP000842.1-201ENST00000524467 TDRD9Q8NDG6 1382 aaKnown RBP20.39■□□□□ 0.85
AP000842.1-201ENST00000524467 WDR97A6NE52 1622 aa20.38■□□□□ 0.85
AP000842.1-201ENST00000524467 CHMP7Q8WUX9 453 aaPredicted RBP20.38■□□□□ 0.85
AP000842.1-201ENST00000524467 FGD5Q6ZNL6 1462 aa20.37■□□□□ 0.85
AP000842.1-201ENST00000524467 SNAPC4Q5SXM2 1469 aa20.33■□□□□ 0.85
AP000842.1-201ENST00000524467 SYNJ1O43426 1573 aa20.32■□□□□ 0.84
AP000842.1-201ENST00000524467 MAGI1Q96QZ7 1491 aaPredicted RBP20.3■□□□□ 0.84
AP000842.1-201ENST00000524467 GRIN2BQ13224 1484 aa20.29■□□□□ 0.84
AP000842.1-201ENST00000524467 ARAP1Q96P48 1450 aa20.28■□□□□ 0.84
AP000842.1-201ENST00000524467 CUX1P39880 1505 aa20.27■□□□□ 0.84
AP000842.1-201ENST00000524467 SUPT5HO00267 1087 aaKnown RBP20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms