RNA–Protein interactions for RNA: ENST00000524063.3

HTR4-212, Transcript of 5-hydroxytryptamine receptor 4, humanhuman

TSL 1 (best)

Gene HTR4, Length 2,274 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTR4-212ENST00000524063 NISCHQ9Y2I1 1504 aa52.07■■■■■ 5.93
HTR4-212ENST00000524063 CCDC180Q9P1Z9 1646 aa44.5■■■■■ 4.71
HTR4-212ENST00000524063 ZCCHC6Q5VYS8 1495 aaKnown RBP44.04■■■■■ 4.64
HTR4-212ENST00000524063 SHROOM4Q9ULL8 1493 aa44■■■■■ 4.63
HTR4-212ENST00000524063 SUPT5HO00267 1087 aaKnown RBP42.99■■■■■ 4.47
HTR4-212ENST00000524063 DCAF8L2P0C7V8 631 aa42.86■■■■■ 4.45
HTR4-212ENST00000524063 DCAF1Q9Y4B6 1507 aa42.8■■■■■ 4.44
HTR4-212ENST00000524063 CHIC1Q5VXU3 224 aa41.83■■■■■ 4.29
HTR4-212ENST00000524063 MYO15BQ96JP2 1530 aa41.73■■■■■ 4.27
HTR4-212ENST00000524063 ABCC9O60706 1549 aa41.54■■■■■ 4.24
HTR4-212ENST00000524063 SCRIBQ14160 1630 aa41.53■■■■■ 4.24
HTR4-212ENST00000524063 NACADO15069 1562 aa41.09■■■■■ 4.17
HTR4-212ENST00000524063 RSF1Q96T23 1441 aaPredicted RBP41.07■■■■■ 4.17
HTR4-212ENST00000524063 RB1CC1Q8TDY2 1594 aa40.67■■■■■ 4.1
HTR4-212ENST00000524063 CECR2Q9BXF3 1484 aa40.58■■■■■ 4.09
HTR4-212ENST00000524063 LOC105371045A0A1W2PR82 267 aa40.5■■■■■ 4.07
HTR4-212ENST00000524063 MROH2BQ7Z745 1585 aa40.46■■■■■ 4.07
HTR4-212ENST00000524063 WIZO95785 1651 aa40.26■■■■■ 4.04
HTR4-212ENST00000524063 PCGF6Q9BYE7 350 aa40.18■■■■■ 4.02
HTR4-212ENST00000524063 HRCP23327 699 aa40.13■■■■■ 4.01
HTR4-212ENST00000524063 TRIM41Q8WV44 630 aa40.09■■■■■ 4.01
HTR4-212ENST00000524063 BAZ1AQ9NRL2 1556 aaPredicted RBP40.03■■■■■ 4
HTR4-212ENST00000524063 UNC13AQ9UPW8 1703 aa40.01■■■■■ 4
HTR4-212ENST00000524063 EIF4G1Q04637 1599 aaKnown RBP39.76■■■■□ 3.95
HTR4-212ENST00000524063 SMARCA4P51532 1647 aa39.74■■■■□ 3.95
HTR4-212ENST00000524063 FAM9AQ8IZU1 332 aaPredicted RBP39.7■■■■□ 3.95
HTR4-212ENST00000524063 TOP2AP11388 1531 aaKnown RBP39.63■■■■□ 3.93
HTR4-212ENST00000524063 TRIM26Q12899 539 aaPredicted RBP39.53■■■■□ 3.92
HTR4-212ENST00000524063 BICRAQ9NZM4 1560 aa39.44■■■■□ 3.9
HTR4-212ENST00000524063 SMARCA2P51531 1590 aa39.43■■■■□ 3.9
HTR4-212ENST00000524063 CCDC88BA6NC98 1476 aa39.4■■■■□ 3.9
HTR4-212ENST00000524063 EHMT2Q96KQ7 1210 aa39.3■■■■□ 3.88
HTR4-212ENST00000524063 PPARGC1BQ86YN6 1023 aaKnown RBP39.29■■■■□ 3.88
HTR4-212ENST00000524063 PABPN1Q86U42 306 aaKnown RBP eCLIP39.23■■■■□ 3.87
HTR4-212ENST00000524063 ABCC8Q09428 1581 aa39.23■■■■□ 3.87
HTR4-212ENST00000524063 PEG3Q9GZU2 1588 aa39.04■■■■□ 3.84
HTR4-212ENST00000524063 SOGA1O94964 1423 aa38.77■■■■□ 3.8
HTR4-212ENST00000524063 ATAD2BQ9ULI0 1458 aa38.7■■■■□ 3.79
HTR4-212ENST00000524063 RUSC2Q8N2Y8 1516 aa38.62■■■■□ 3.77
HTR4-212ENST00000524063 EEA1Q15075 1411 aa38.56■■■■□ 3.76
HTR4-212ENST00000524063 BAZ1BQ9UIG0 1483 aaKnown RBP38.55■■■■□ 3.76
HTR4-212ENST00000524063 WRNQ14191 1432 aaPredicted RBP eCLIP38.55■■■■□ 3.76
HTR4-212ENST00000524063 ZEB1P37275 1124 aaPredicted RBP38.53■■■■□ 3.76
HTR4-212ENST00000524063 CEP162Q5TB80 1403 aa38.49■■■■□ 3.75
HTR4-212ENST00000524063 SYNJ1O43426 1573 aa38.48■■■■□ 3.75
HTR4-212ENST00000524063 CSRNP3Q8WYN3 585 aa38.45■■■■□ 3.75
HTR4-212ENST00000524063 TNIKQ9UKE5 1360 aa38.45■■■■□ 3.75
HTR4-212ENST00000524063 GOLGA3Q08378 1498 aa38.29■■■■□ 3.72
HTR4-212ENST00000524063 UBTFP17480 764 aaKnown RBP38.18■■■■□ 3.7
HTR4-212ENST00000524063 KIF21BO75037 1637 aa38.15■■■■□ 3.7
HTR4-212ENST00000524063 CEP164Q9UPV0 1460 aa38.1■■■■□ 3.69
HTR4-212ENST00000524063 HMGXB3Q12766 1538 aa38.04■■■■□ 3.68
HTR4-212ENST00000524063 TOP2BQ02880 1626 aa38.03■■■■□ 3.68
HTR4-212ENST00000524063 TTBK1Q5TCY1 1321 aaPredicted RBP38■■■■□ 3.67
HTR4-212ENST00000524063 NCAPD3P42695 1498 aa38■■■■□ 3.67
HTR4-212ENST00000524063 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP37.97■■■■□ 3.67
HTR4-212ENST00000524063 BIVM-ERCC5R4GMW8 1640 aa37.95■■■■□ 3.67
HTR4-212ENST00000524063 RAPGEF2Q9Y4G8 1499 aa37.86■■■■□ 3.65
HTR4-212ENST00000524063 CCER1Q8TC90 406 aaPredicted RBP37.81■■■■□ 3.64
HTR4-212ENST00000524063 CLIP1P30622 1438 aa37.8■■■■□ 3.64
HTR4-212ENST00000524063 CUX1P39880 1505 aa37.69■■■■□ 3.62
HTR4-212ENST00000524063 VPS8Q8N3P4 1428 aa37.65■■■■□ 3.62
HTR4-212ENST00000524063 CFTRP13569 1480 aa37.64■■■■□ 3.62
HTR4-212ENST00000524063 PRXQ9BXM0 1461 aa37.56■■■■□ 3.6
HTR4-212ENST00000524063 ERICH3Q5RHP9 1530 aa37.56■■■■□ 3.6
HTR4-212ENST00000524063 PRDM2Q13029 1718 aa37.5■■■■□ 3.59
HTR4-212ENST00000524063 RANGAP1P46060 587 aaPredicted RBP37.41■■■■□ 3.58
HTR4-212ENST00000524063 KIF27Q86VH2 1401 aa37.36■■■■□ 3.57
HTR4-212ENST00000524063 ARAP1Q96P48 1450 aa37.32■■■■□ 3.56
HTR4-212ENST00000524063 APLP2Q06481 763 aa37.24■■■■□ 3.55
HTR4-212ENST00000524063 HNRNPUL2Q1KMD3 747 aaKnown RBP37.21■■■■□ 3.55
HTR4-212ENST00000524063 CADPSQ9ULU8 1353 aa37.19■■■■□ 3.54
HTR4-212ENST00000524063 CC2D2AQ9P2K1 1620 aa37.17■■■■□ 3.54
HTR4-212ENST00000524063 CUX2O14529 1486 aa37.06■■■■□ 3.52
HTR4-212ENST00000524063 FGD5Q6ZNL6 1462 aa37.01■■■■□ 3.52
HTR4-212ENST00000524063 ARHGAP35Q9NRY4 1499 aa37.01■■■■□ 3.52
HTR4-212ENST00000524063 IGF1RP08069 1367 aa36.99■■■■□ 3.51
HTR4-212ENST00000524063 DIEXFQ68CQ4 756 aaKnown RBP36.97■■■■□ 3.51
HTR4-212ENST00000524063 KANK4Q5T7N3 995 aaPredicted RBP36.96■■■■□ 3.51
HTR4-212ENST00000524063 FANCD2Q9BXW9 1451 aa36.86■■■■□ 3.49
HTR4-212ENST00000524063 SCAF1Q9H7N4 1312 aaKnown RBP36.8■■■■□ 3.48
HTR4-212ENST00000524063 CARMIL1Q5VZK9 1371 aa36.8■■■■□ 3.48
HTR4-212ENST00000524063 ZNF316A6NFI3 1004 aaPredicted RBP36.8■■■■□ 3.48
HTR4-212ENST00000524063 RRBP1Q9P2E9 1410 aaKnown RBP36.77■■■■□ 3.48
HTR4-212ENST00000524063 DNMBPQ6XZF7 1577 aa36.73■■■■□ 3.47
HTR4-212ENST00000524063 NESP48681 1621 aa36.68■■■■□ 3.46
HTR4-212ENST00000524063 TOPBP1Q92547 1522 aa36.64■■■■□ 3.46
HTR4-212ENST00000524063 RAD54L2Q9Y4B4 1467 aa36.63■■■■□ 3.46
HTR4-212ENST00000524063 DHX57Q6P158 1386 aaKnown RBP36.62■■■■□ 3.45
HTR4-212ENST00000524063 POLA1P09884 1462 aaPredicted RBP36.6■■■■□ 3.45
HTR4-212ENST00000524063 ABCA10Q8WWZ4 1543 aa36.6■■■■□ 3.45
HTR4-212ENST00000524063 TIAM1Q13009 1591 aa36.6■■■■□ 3.45
HTR4-212ENST00000524063 MAP3K1Q13233 1512 aa36.56■■■■□ 3.44
HTR4-212ENST00000524063 CCNB3Q8WWL7 1395 aa36.55■■■■□ 3.44
HTR4-212ENST00000524063 ACIN1Q9UKV3 1341 aaKnown RBP36.53■■■■□ 3.44
HTR4-212ENST00000524063 NEUROD1Q13562 356 aa36.52■■■■□ 3.44
HTR4-212ENST00000524063 CLSPNQ9HAW4 1339 aa36.5■■■■□ 3.43
HTR4-212ENST00000524063 PCF11O94913 1555 aaKnown RBP36.43■■■■□ 3.42
HTR4-212ENST00000524063 LAMC3Q9Y6N6 1575 aa36.43■■■■□ 3.42
HTR4-212ENST00000524063 WDR97A6NE52 1622 aa36.42■■■■□ 3.42
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms