RNA–Protein interactions for RNA: ENST00000523514.1

FAM49B-227, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 4

Gene FAM49B, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-227ENST00000523514 AEBP2Q6ZN18 517 aaPredicted RBP20.99■□□□□ 0.95
FAM49B-227ENST00000523514 CHIC1Q5VXU3 224 aa20.2■□□□□ 0.82
FAM49B-227ENST00000523514 NISCHQ9Y2I1 1504 aa18.74■□□□□ 0.59
FAM49B-227ENST00000523514 PHF23Q9BUL5 403 aaPredicted RBP17.84■□□□□ 0.45
FAM49B-227ENST00000523514 SENP3Q9H4L4 574 aaPredicted RBP17.75■□□□□ 0.43
FAM49B-227ENST00000523514 CCDC180Q9P1Z9 1646 aa16.74■□□□□ 0.27
FAM49B-227ENST00000523514 FOXD1Q16676 465 aa16.58■□□□□ 0.24
FAM49B-227ENST00000523514 PLPPR3Q6T4P5 718 aa16.49■□□□□ 0.23
FAM49B-227ENST00000523514 ABCC9O60706 1549 aa16.24■□□□□ 0.19
FAM49B-227ENST00000523514 PPP6R1Q9UPN7 881 aa15.79■□□□□ 0.12
FAM49B-227ENST00000523514 ADRA2BP18089 450 aa15.73■□□□□ 0.11
FAM49B-227ENST00000523514 RB1CC1Q8TDY2 1594 aa15.71■□□□□ 0.11
FAM49B-227ENST00000523514 NACADO15069 1562 aa15.7■□□□□ 0.1
FAM49B-227ENST00000523514 ZCCHC6Q5VYS8 1495 aaKnown RBP15.64■□□□□ 0.09
FAM49B-227ENST00000523514 MYO15BQ96JP2 1530 aa15.63■□□□□ 0.09
FAM49B-227ENST00000523514 DCAF1Q9Y4B6 1507 aa15.57■□□□□ 0.08
FAM49B-227ENST00000523514 DCAF8L2P0C7V8 631 aa15.56■□□□□ 0.08
FAM49B-227ENST00000523514 PIAS4Q8N2W9 510 aaPredicted RBP15.51■□□□□ 0.07
FAM49B-227ENST00000523514 UNC13AQ9UPW8 1703 aa15.34■□□□□ 0.05
FAM49B-227ENST00000523514 MSH5O43196 834 aa15.3■□□□□ 0.04
FAM49B-227ENST00000523514 SCRIBQ14160 1630 aa15.2■□□□□ 0.02
FAM49B-227ENST00000523514 BICRAQ9NZM4 1560 aa15.18■□□□□ 0.02
FAM49B-227ENST00000523514 SHROOM4Q9ULL8 1493 aa15.14■□□□□ 0.01
FAM49B-227ENST00000523514 PABPN1Q86U42 306 aaKnown RBP eCLIP15.13■□□□□ 0.01
FAM49B-227ENST00000523514 EIF4G1Q04637 1599 aaKnown RBP14.81□□□□□ -0.04
FAM49B-227ENST00000523514 DNAJC5BQ9UF47 199 aa14.8□□□□□ -0.04
FAM49B-227ENST00000523514 CC2D2AQ9P2K1 1620 aa14.73□□□□□ -0.05
FAM49B-227ENST00000523514 KCNA4P22459 653 aa14.65□□□□□ -0.06
FAM49B-227ENST00000523514 CECR2Q9BXF3 1484 aa14.62□□□□□ -0.07
FAM49B-227ENST00000523514 PPP4R3CPQ6ZMV5 832 aa14.59□□□□□ -0.07
FAM49B-227ENST00000523514 BAZ1AQ9NRL2 1556 aaPredicted RBP14.57□□□□□ -0.08
FAM49B-227ENST00000523514 SMARCA4P51532 1647 aa14.56□□□□□ -0.08
FAM49B-227ENST00000523514 SMARCA2P51531 1590 aa14.48□□□□□ -0.09
FAM49B-227ENST00000523514 NCAPD3P42695 1498 aa14.45□□□□□ -0.1
FAM49B-227ENST00000523514 ATAD2BQ9ULI0 1458 aa14.45□□□□□ -0.1
FAM49B-227ENST00000523514 POTEDQ86YR6 584 aa14.45□□□□□ -0.1
FAM49B-227ENST00000523514 PEG3Q9GZU2 1588 aa14.44□□□□□ -0.1
FAM49B-227ENST00000523514 HMGXB3Q12766 1538 aa14.42□□□□□ -0.1
FAM49B-227ENST00000523514 MROH2BQ7Z745 1585 aa14.42□□□□□ -0.1
FAM49B-227ENST00000523514 MAPK8IP2Q13387 824 aaPredicted RBP14.37□□□□□ -0.11
FAM49B-227ENST00000523514 BAZ1BQ9UIG0 1483 aaKnown RBP14.36□□□□□ -0.11
FAM49B-227ENST00000523514 SCAF1Q9H7N4 1312 aaKnown RBP14.28□□□□□ -0.12
FAM49B-227ENST00000523514 WIZO95785 1651 aa14.27□□□□□ -0.12
FAM49B-227ENST00000523514 RSF1Q96T23 1441 aaPredicted RBP14.26□□□□□ -0.13
FAM49B-227ENST00000523514 NCBP3Q53F19 620 aaKnown RBP14.23□□□□□ -0.13
FAM49B-227ENST00000523514 TOP2AP11388 1531 aaKnown RBP14.17□□□□□ -0.14
FAM49B-227ENST00000523514 DMRT2Q9Y5R5 561 aa14.16□□□□□ -0.14
FAM49B-227ENST00000523514 NPM3O75607 178 aaKnown RBP14.12□□□□□ -0.15
FAM49B-227ENST00000523514 LAMC3Q9Y6N6 1575 aa14.1□□□□□ -0.15
FAM49B-227ENST00000523514 CNKSR2Q8WXI2 1034 aa14.1□□□□□ -0.15
FAM49B-227ENST00000523514 NESP48681 1621 aa14.04□□□□□ -0.16
FAM49B-227ENST00000523514 ERCC6Q03468 1493 aa14.04□□□□□ -0.16
FAM49B-227ENST00000523514 CADPSQ9ULU8 1353 aa14.02□□□□□ -0.17
FAM49B-227ENST00000523514 PDS5BQ9NTI5 1447 aa13.99□□□□□ -0.17
FAM49B-227ENST00000523514 SLC4A1APQ9BWU0 796 aaKnown RBP13.96□□□□□ -0.17
FAM49B-227ENST00000523514 CCDC88BA6NC98 1476 aa13.95□□□□□ -0.18
FAM49B-227ENST00000523514 CFTRP13569 1480 aa13.95□□□□□ -0.18
FAM49B-227ENST00000523514 KIF21AQ7Z4S6 1674 aa13.95□□□□□ -0.18
FAM49B-227ENST00000523514 EHMT2Q96KQ7 1210 aa13.93□□□□□ -0.18
FAM49B-227ENST00000523514 PRDM2Q13029 1718 aa13.93□□□□□ -0.18
FAM49B-227ENST00000523514 CUX2O14529 1486 aa13.91□□□□□ -0.18
FAM49B-227ENST00000523514 THOC2Q8NI27 1593 aaKnown RBP13.9□□□□□ -0.18
FAM49B-227ENST00000523514 FANCD2Q9BXW9 1451 aa13.87□□□□□ -0.19
FAM49B-227ENST00000523514 CEP164Q9UPV0 1460 aa13.87□□□□□ -0.19
FAM49B-227ENST00000523514 SUPT5HO00267 1087 aaKnown RBP13.86□□□□□ -0.19
FAM49B-227ENST00000523514 MRC2Q9UBG0 1479 aa13.84□□□□□ -0.19
FAM49B-227ENST00000523514 WDR62O43379 1518 aa13.8□□□□□ -0.2
FAM49B-227ENST00000523514 HOXD11P31277 338 aaPredicted RBP13.79□□□□□ -0.2
FAM49B-227ENST00000523514 RNF216Q9NWF9 866 aaPredicted RBP13.75□□□□□ -0.21
FAM49B-227ENST00000523514 URB2Q14146 1524 aaKnown RBP13.71□□□□□ -0.21
FAM49B-227ENST00000523514 ABCC8Q09428 1581 aa13.7□□□□□ -0.22
FAM49B-227ENST00000523514 CSRNP3Q8WYN3 585 aa13.67□□□□□ -0.22
FAM49B-227ENST00000523514 DNMBPQ6XZF7 1577 aa13.66□□□□□ -0.22
FAM49B-227ENST00000523514 TOPBP1Q92547 1522 aa13.64□□□□□ -0.23
FAM49B-227ENST00000523514 IFT140Q96RY7 1462 aa13.58□□□□□ -0.24
FAM49B-227ENST00000523514 ZBTB22O15209 634 aa13.54□□□□□ -0.24
FAM49B-227ENST00000523514 CUX1P39880 1505 aa13.54□□□□□ -0.24
FAM49B-227ENST00000523514 POLA1P09884 1462 aaPredicted RBP13.53□□□□□ -0.24
FAM49B-227ENST00000523514 TARBP1Q13395 1621 aaKnown RBP13.5□□□□□ -0.25
FAM49B-227ENST00000523514 FGD5Q6ZNL6 1462 aa13.5□□□□□ -0.25
FAM49B-227ENST00000523514 DCAF8L1A6NGE4 600 aa13.5□□□□□ -0.25
FAM49B-227ENST00000523514 WDR97A6NE52 1622 aa13.48□□□□□ -0.25
FAM49B-227ENST00000523514 WRNQ14191 1432 aaPredicted RBP eCLIP13.47□□□□□ -0.25
FAM49B-227ENST00000523514 BIVM-ERCC5R4GMW8 1640 aa13.47□□□□□ -0.25
FAM49B-227ENST00000523514 TOP2BQ02880 1626 aa13.46□□□□□ -0.25
FAM49B-227ENST00000523514 EIF4G3O43432 1585 aaKnown RBP13.46□□□□□ -0.25
FAM49B-227ENST00000523514 SOGA1O94964 1423 aa13.46□□□□□ -0.26
FAM49B-227ENST00000523514 ZNF608Q9ULD9 1512 aaPredicted RBP13.45□□□□□ -0.26
FAM49B-227ENST00000523514 RAD54L2Q9Y4B4 1467 aa13.43□□□□□ -0.26
FAM49B-227ENST00000523514 SYNJ1O43426 1573 aa13.43□□□□□ -0.26
FAM49B-227ENST00000523514 ABCA10Q8WWZ4 1543 aa13.39□□□□□ -0.27
FAM49B-227ENST00000523514 AQRO60306 1485 aaKnown RBP eCLIP13.38□□□□□ -0.27
FAM49B-227ENST00000523514 DNAJC5Q9H3Z4 198 aa13.38□□□□□ -0.27
FAM49B-227ENST00000523514 TDRD9Q8NDG6 1382 aaKnown RBP13.35□□□□□ -0.27
FAM49B-227ENST00000523514 FOXD4L1Q9NU39 408 aa13.35□□□□□ -0.27
FAM49B-227ENST00000523514 ABCA5Q8WWZ7 1642 aa13.35□□□□□ -0.27
FAM49B-227ENST00000523514 GRIN2BQ13224 1484 aa13.34□□□□□ -0.27
FAM49B-227ENST00000523514 PBRM1Q86U86 1689 aa13.34□□□□□ -0.27
FAM49B-227ENST00000523514 GAPVD1Q14C86 1478 aa13.32□□□□□ -0.28
FAM49B-227ENST00000523514 MAGI1Q96QZ7 1491 aaPredicted RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms