RNA–Protein interactions for RNA: ENST00000520972.5

ARHGEF10-208, Transcript of Rho guanine nucleotide exchange factor 10, humanhuman

TSL 5

Gene ARHGEF10, Length 2,176 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF10-208ENST00000520972 NISCHQ9Y2I1 1504 aa28.6■■■□□ 2.17
ARHGEF10-208ENST00000520972 CCDC180Q9P1Z9 1646 aa24.57■■□□□ 1.52
ARHGEF10-208ENST00000520972 ZCCHC6Q5VYS8 1495 aaKnown RBP24.15■■□□□ 1.46
ARHGEF10-208ENST00000520972 SHROOM4Q9ULL8 1493 aa23.87■■□□□ 1.41
ARHGEF10-208ENST00000520972 DCAF1Q9Y4B6 1507 aa23.55■■□□□ 1.36
ARHGEF10-208ENST00000520972 DCAF8L2P0C7V8 631 aa23.52■■□□□ 1.36
ARHGEF10-208ENST00000520972 SUPT5HO00267 1087 aaKnown RBP23.16■■□□□ 1.3
ARHGEF10-208ENST00000520972 MYO15BQ96JP2 1530 aa23.05■■□□□ 1.28
ARHGEF10-208ENST00000520972 ABCC9O60706 1549 aa22.97■■□□□ 1.27
ARHGEF10-208ENST00000520972 SCRIBQ14160 1630 aa22.84■■□□□ 1.25
ARHGEF10-208ENST00000520972 NACADO15069 1562 aa22.77■■□□□ 1.24
ARHGEF10-208ENST00000520972 RB1CC1Q8TDY2 1594 aa22.46■■□□□ 1.19
ARHGEF10-208ENST00000520972 RSF1Q96T23 1441 aaPredicted RBP22.45■■□□□ 1.19
ARHGEF10-208ENST00000520972 CHIC1Q5VXU3 224 aa22.44■■□□□ 1.18
ARHGEF10-208ENST00000520972 CECR2Q9BXF3 1484 aa22.32■■□□□ 1.16
ARHGEF10-208ENST00000520972 MROH2BQ7Z745 1585 aa22.2■■□□□ 1.15
ARHGEF10-208ENST00000520972 UNC13AQ9UPW8 1703 aa22.17■■□□□ 1.14
ARHGEF10-208ENST00000520972 WIZO95785 1651 aa22.04■■□□□ 1.12
ARHGEF10-208ENST00000520972 BAZ1AQ9NRL2 1556 aaPredicted RBP21.98■■□□□ 1.11
ARHGEF10-208ENST00000520972 BICRAQ9NZM4 1560 aa21.94■■□□□ 1.1
ARHGEF10-208ENST00000520972 SMARCA4P51532 1647 aa21.88■■□□□ 1.09
ARHGEF10-208ENST00000520972 PABPN1Q86U42 306 aaKnown RBP eCLIP21.82■■□□□ 1.08
ARHGEF10-208ENST00000520972 TOP2AP11388 1531 aaKnown RBP21.72■■□□□ 1.07
ARHGEF10-208ENST00000520972 LOC105371045A0A1W2PR82 267 aa21.69■■□□□ 1.06
ARHGEF10-208ENST00000520972 EIF4G1Q04637 1599 aaKnown RBP21.69■■□□□ 1.06
ARHGEF10-208ENST00000520972 TRIM41Q8WV44 630 aa21.64■■□□□ 1.05
ARHGEF10-208ENST00000520972 SMARCA2P51531 1590 aa21.6■■□□□ 1.05
ARHGEF10-208ENST00000520972 CCDC88BA6NC98 1476 aa21.59■■□□□ 1.05
ARHGEF10-208ENST00000520972 PEG3Q9GZU2 1588 aa21.55■■□□□ 1.04
ARHGEF10-208ENST00000520972 PELP1Q8IZL8 1130 aaKnown RBP21.5■■□□□ 1.03
ARHGEF10-208ENST00000520972 ATAD2BQ9ULI0 1458 aa21.41■■□□□ 1.02
ARHGEF10-208ENST00000520972 MYT1Q01538 1121 aa21.4■■□□□ 1.02
ARHGEF10-208ENST00000520972 FAM9AQ8IZU1 332 aaPredicted RBP21.39■■□□□ 1.01
ARHGEF10-208ENST00000520972 ABCC8Q09428 1581 aa21.37■■□□□ 1.01
ARHGEF10-208ENST00000520972 BAZ1BQ9UIG0 1483 aaKnown RBP21.27■■□□□ 1
ARHGEF10-208ENST00000520972 PCGF6Q9BYE7 350 aa21.19■□□□□ 0.98
ARHGEF10-208ENST00000520972 EHMT2Q96KQ7 1210 aa21.14■□□□□ 0.98
ARHGEF10-208ENST00000520972 NCAPD3P42695 1498 aa21.09■□□□□ 0.97
ARHGEF10-208ENST00000520972 SOGA1O94964 1423 aa21.08■□□□□ 0.97
ARHGEF10-208ENST00000520972 HMGXB3Q12766 1538 aa21.06■□□□□ 0.96
ARHGEF10-208ENST00000520972 WRNQ14191 1432 aaPredicted RBP eCLIP21.06■□□□□ 0.96
ARHGEF10-208ENST00000520972 SYNJ1O43426 1573 aa21.02■□□□□ 0.96
ARHGEF10-208ENST00000520972 RUSC2Q8N2Y8 1516 aa21.02■□□□□ 0.95
ARHGEF10-208ENST00000520972 HRCP23327 699 aa20.96■□□□□ 0.95
ARHGEF10-208ENST00000520972 TRIM26Q12899 539 aaPredicted RBP20.93■□□□□ 0.94
ARHGEF10-208ENST00000520972 EEA1Q15075 1411 aa20.91■□□□□ 0.94
ARHGEF10-208ENST00000520972 CSRNP3Q8WYN3 585 aa20.86■□□□□ 0.93
ARHGEF10-208ENST00000520972 TOP2BQ02880 1626 aa20.81■□□□□ 0.92
ARHGEF10-208ENST00000520972 TTBK1Q5TCY1 1321 aaPredicted RBP20.79■□□□□ 0.92
ARHGEF10-208ENST00000520972 CFTRP13569 1480 aa20.79■□□□□ 0.92
ARHGEF10-208ENST00000520972 TNIKQ9UKE5 1360 aa20.78■□□□□ 0.92
ARHGEF10-208ENST00000520972 BIVM-ERCC5R4GMW8 1640 aa20.77■□□□□ 0.91
ARHGEF10-208ENST00000520972 CEP162Q5TB80 1403 aa20.76■□□□□ 0.91
ARHGEF10-208ENST00000520972 CC2D2AQ9P2K1 1620 aa20.75■□□□□ 0.91
ARHGEF10-208ENST00000520972 GOLGA3Q08378 1498 aa20.72■□□□□ 0.91
ARHGEF10-208ENST00000520972 CUX1P39880 1505 aa20.7■□□□□ 0.9
ARHGEF10-208ENST00000520972 KIF21BO75037 1637 aa20.69■□□□□ 0.9
ARHGEF10-208ENST00000520972 CEP164Q9UPV0 1460 aa20.66■□□□□ 0.9
ARHGEF10-208ENST00000520972 PPARGC1BQ86YN6 1023 aaKnown RBP20.66■□□□□ 0.9
ARHGEF10-208ENST00000520972 UBTFP17480 764 aaKnown RBP20.63■□□□□ 0.89
ARHGEF10-208ENST00000520972 PRDM2Q13029 1718 aa20.61■□□□□ 0.89
ARHGEF10-208ENST00000520972 RAPGEF2Q9Y4G8 1499 aa20.6■□□□□ 0.89
ARHGEF10-208ENST00000520972 CADPSQ9ULU8 1353 aa20.6■□□□□ 0.89
ARHGEF10-208ENST00000520972 PRXQ9BXM0 1461 aa20.5■□□□□ 0.87
ARHGEF10-208ENST00000520972 CLIP1P30622 1438 aa20.45■□□□□ 0.86
ARHGEF10-208ENST00000520972 ERICH3Q5RHP9 1530 aa20.44■□□□□ 0.86
ARHGEF10-208ENST00000520972 KIF27Q86VH2 1401 aa20.43■□□□□ 0.86
ARHGEF10-208ENST00000520972 FANCD2Q9BXW9 1451 aa20.39■□□□□ 0.85
ARHGEF10-208ENST00000520972 NESP48681 1621 aa20.38■□□□□ 0.85
ARHGEF10-208ENST00000520972 FGD5Q6ZNL6 1462 aa20.37■□□□□ 0.85
ARHGEF10-208ENST00000520972 VPS8Q8N3P4 1428 aa20.34■□□□□ 0.85
ARHGEF10-208ENST00000520972 DNAJC5BQ9UF47 199 aa20.33■□□□□ 0.85
ARHGEF10-208ENST00000520972 CUX2O14529 1486 aa20.32■□□□□ 0.84
ARHGEF10-208ENST00000520972 IGF1RP08069 1367 aa20.29■□□□□ 0.84
ARHGEF10-208ENST00000520972 RANGAP1P46060 587 aaPredicted RBP20.27■□□□□ 0.84
ARHGEF10-208ENST00000520972 DNMBPQ6XZF7 1577 aa20.25■□□□□ 0.83
ARHGEF10-208ENST00000520972 ARAP1Q96P48 1450 aa20.25■□□□□ 0.83
ARHGEF10-208ENST00000520972 TOPBP1Q92547 1522 aa20.24■□□□□ 0.83
ARHGEF10-208ENST00000520972 ZEB1P37275 1124 aaPredicted RBP20.23■□□□□ 0.83
ARHGEF10-208ENST00000520972 LAMC3Q9Y6N6 1575 aa20.23■□□□□ 0.83
ARHGEF10-208ENST00000520972 POLA1P09884 1462 aaPredicted RBP20.2■□□□□ 0.82
ARHGEF10-208ENST00000520972 RAD54L2Q9Y4B4 1467 aa20.19■□□□□ 0.82
ARHGEF10-208ENST00000520972 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.17■□□□□ 0.82
ARHGEF10-208ENST00000520972 URB2Q14146 1524 aaKnown RBP20.16■□□□□ 0.82
ARHGEF10-208ENST00000520972 ABCA10Q8WWZ4 1543 aa20.16■□□□□ 0.82
ARHGEF10-208ENST00000520972 SLC24A1O60721 1099 aa20.15■□□□□ 0.82
ARHGEF10-208ENST00000520972 CARMIL1Q5VZK9 1371 aa20.14■□□□□ 0.82
ARHGEF10-208ENST00000520972 ARHGAP35Q9NRY4 1499 aa20.14■□□□□ 0.81
ARHGEF10-208ENST00000520972 WDR97A6NE52 1622 aa20.06■□□□□ 0.8
ARHGEF10-208ENST00000520972 KIF21AQ7Z4S6 1674 aa20.05■□□□□ 0.8
ARHGEF10-208ENST00000520972 PDS5BQ9NTI5 1447 aa20.05■□□□□ 0.8
ARHGEF10-208ENST00000520972 CCER1Q8TC90 406 aaPredicted RBP20.02■□□□□ 0.8
ARHGEF10-208ENST00000520972 APLP2Q06481 763 aa20.02■□□□□ 0.8
ARHGEF10-208ENST00000520972 KANK4Q5T7N3 995 aaPredicted RBP20.01■□□□□ 0.79
ARHGEF10-208ENST00000520972 ABCA5Q8WWZ7 1642 aa19.97■□□□□ 0.79
ARHGEF10-208ENST00000520972 PRKCSHP14314 528 aaPredicted RBP19.96■□□□□ 0.79
ARHGEF10-208ENST00000520972 CUL7Q14999 1698 aa19.95■□□□□ 0.78
ARHGEF10-208ENST00000520972 TDRD9Q8NDG6 1382 aaKnown RBP19.94■□□□□ 0.78
ARHGEF10-208ENST00000520972 HNRNPUL2Q1KMD3 747 aaKnown RBP19.92■□□□□ 0.78
ARHGEF10-208ENST00000520972 TARBP1Q13395 1621 aaKnown RBP19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 166 ms