RNA–Protein interactions for RNA: ENST00000520823.6

SMG1P3-204, Transcript of SMG1 pseudogene 3, humanhuman

TSL 5 BASIC

Gene SMG1P3, Length 3,194 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1P3-204ENST00000520823 NISCHQ9Y2I1 1504 aa11.26□□□□□ -0.61
SMG1P3-204ENST00000520823 AEBP2Q6ZN18 517 aaPredicted RBP10.3□□□□□ -0.76
SMG1P3-204ENST00000520823 CHIC1Q5VXU3 224 aa10.24□□□□□ -0.77
SMG1P3-204ENST00000520823 CCDC180Q9P1Z9 1646 aa9.86□□□□□ -0.83
SMG1P3-204ENST00000520823 ZCCHC6Q5VYS8 1495 aaKnown RBP9.5□□□□□ -0.89
SMG1P3-204ENST00000520823 DCAF1Q9Y4B6 1507 aa9.42□□□□□ -0.9
SMG1P3-204ENST00000520823 MYO15BQ96JP2 1530 aa9.3□□□□□ -0.92
SMG1P3-204ENST00000520823 NACADO15069 1562 aa9.14□□□□□ -0.95
SMG1P3-204ENST00000520823 DCAF8L2P0C7V8 631 aa9.09□□□□□ -0.95
SMG1P3-204ENST00000520823 SHROOM4Q9ULL8 1493 aa9.06□□□□□ -0.96
SMG1P3-204ENST00000520823 PHF23Q9BUL5 403 aaPredicted RBP9.04□□□□□ -0.96
SMG1P3-204ENST00000520823 ABCC9O60706 1549 aa9.03□□□□□ -0.96
SMG1P3-204ENST00000520823 RB1CC1Q8TDY2 1594 aa9.01□□□□□ -0.97
SMG1P3-204ENST00000520823 SCRIBQ14160 1630 aa8.92□□□□□ -0.98
SMG1P3-204ENST00000520823 SUPT5HO00267 1087 aaKnown RBP8.81□□□□□ -1
SMG1P3-204ENST00000520823 RSF1Q96T23 1441 aaPredicted RBP8.74□□□□□ -1.01
SMG1P3-204ENST00000520823 UNC13AQ9UPW8 1703 aa8.73□□□□□ -1.01
SMG1P3-204ENST00000520823 BAZ1AQ9NRL2 1556 aaPredicted RBP8.73□□□□□ -1.01
SMG1P3-204ENST00000520823 BICRAQ9NZM4 1560 aa8.65□□□□□ -1.02
SMG1P3-204ENST00000520823 CECR2Q9BXF3 1484 aa8.64□□□□□ -1.03
SMG1P3-204ENST00000520823 MROH2BQ7Z745 1585 aa8.64□□□□□ -1.03
SMG1P3-204ENST00000520823 SMARCA4P51532 1647 aa8.63□□□□□ -1.03
SMG1P3-204ENST00000520823 PEG3Q9GZU2 1588 aa8.59□□□□□ -1.04
SMG1P3-204ENST00000520823 TOP2AP11388 1531 aaKnown RBP8.57□□□□□ -1.04
SMG1P3-204ENST00000520823 WIZO95785 1651 aa8.56□□□□□ -1.04
SMG1P3-204ENST00000520823 SENP3Q9H4L4 574 aaPredicted RBP8.55□□□□□ -1.04
SMG1P3-204ENST00000520823 SMARCA2P51531 1590 aa8.52□□□□□ -1.05
SMG1P3-204ENST00000520823 PABPN1Q86U42 306 aaKnown RBP eCLIP8.48□□□□□ -1.05
SMG1P3-204ENST00000520823 ATAD2BQ9ULI0 1458 aa8.45□□□□□ -1.06
SMG1P3-204ENST00000520823 EIF4G1Q04637 1599 aaKnown RBP8.44□□□□□ -1.06
SMG1P3-204ENST00000520823 HMGXB3Q12766 1538 aa8.43□□□□□ -1.06
SMG1P3-204ENST00000520823 BAZ1BQ9UIG0 1483 aaKnown RBP8.42□□□□□ -1.06
SMG1P3-204ENST00000520823 CCDC88BA6NC98 1476 aa8.42□□□□□ -1.06
SMG1P3-204ENST00000520823 PLPPR3Q6T4P5 718 aa8.42□□□□□ -1.06
SMG1P3-204ENST00000520823 NCAPD3P42695 1498 aa8.4□□□□□ -1.06
SMG1P3-204ENST00000520823 TRIM41Q8WV44 630 aa8.36□□□□□ -1.07
SMG1P3-204ENST00000520823 EEA1Q15075 1411 aa8.3□□□□□ -1.08
SMG1P3-204ENST00000520823 WRNQ14191 1432 aaPredicted RBP eCLIP8.25□□□□□ -1.09
SMG1P3-204ENST00000520823 PRDM2Q13029 1718 aa8.23□□□□□ -1.09
SMG1P3-204ENST00000520823 CC2D2AQ9P2K1 1620 aa8.23□□□□□ -1.09
SMG1P3-204ENST00000520823 CFTRP13569 1480 aa8.23□□□□□ -1.09
SMG1P3-204ENST00000520823 ABCC8Q09428 1581 aa8.22□□□□□ -1.09
SMG1P3-204ENST00000520823 TOP2BQ02880 1626 aa8.19□□□□□ -1.1
SMG1P3-204ENST00000520823 BIVM-ERCC5R4GMW8 1640 aa8.19□□□□□ -1.1
SMG1P3-204ENST00000520823 CADPSQ9ULU8 1353 aa8.17□□□□□ -1.1
SMG1P3-204ENST00000520823 SYNJ1O43426 1573 aa8.16□□□□□ -1.1
SMG1P3-204ENST00000520823 LOC105371045A0A1W2PR82 267 aa8.12□□□□□ -1.11
SMG1P3-204ENST00000520823 KIF21BO75037 1637 aa8.12□□□□□ -1.11
SMG1P3-204ENST00000520823 LAMC3Q9Y6N6 1575 aa8.12□□□□□ -1.11
SMG1P3-204ENST00000520823 CEP164Q9UPV0 1460 aa8.12□□□□□ -1.11
SMG1P3-204ENST00000520823 GOLGA3Q08378 1498 aa8.11□□□□□ -1.11
SMG1P3-204ENST00000520823 CSRNP3Q8WYN3 585 aa8.11□□□□□ -1.11
SMG1P3-204ENST00000520823 TNIKQ9UKE5 1360 aa8.11□□□□□ -1.11
SMG1P3-204ENST00000520823 FAM9AQ8IZU1 332 aaPredicted RBP8.09□□□□□ -1.11
SMG1P3-204ENST00000520823 SOGA1O94964 1423 aa8.09□□□□□ -1.11
SMG1P3-204ENST00000520823 CUX1P39880 1505 aa8.08□□□□□ -1.12
SMG1P3-204ENST00000520823 FOXD1Q16676 465 aa8.08□□□□□ -1.12
SMG1P3-204ENST00000520823 ERICH3Q5RHP9 1530 aa8.07□□□□□ -1.12
SMG1P3-204ENST00000520823 KIF27Q86VH2 1401 aa8.06□□□□□ -1.12
SMG1P3-204ENST00000520823 FANCD2Q9BXW9 1451 aa8.06□□□□□ -1.12
SMG1P3-204ENST00000520823 DNMBPQ6XZF7 1577 aa8.05□□□□□ -1.12
SMG1P3-204ENST00000520823 PDS5BQ9NTI5 1447 aa8.04□□□□□ -1.12
SMG1P3-204ENST00000520823 CEP162Q5TB80 1403 aa8.02□□□□□ -1.13
SMG1P3-204ENST00000520823 RUSC2Q8N2Y8 1516 aa8.02□□□□□ -1.13
SMG1P3-204ENST00000520823 PRXQ9BXM0 1461 aa8.02□□□□□ -1.13
SMG1P3-204ENST00000520823 TRIM26Q12899 539 aaPredicted RBP8.01□□□□□ -1.13
SMG1P3-204ENST00000520823 FGD5Q6ZNL6 1462 aa7.99□□□□□ -1.13
SMG1P3-204ENST00000520823 TOPBP1Q92547 1522 aa7.98□□□□□ -1.13
SMG1P3-204ENST00000520823 UBTFP17480 764 aaKnown RBP7.98□□□□□ -1.13
SMG1P3-204ENST00000520823 ABCA10Q8WWZ4 1543 aa7.98□□□□□ -1.13
SMG1P3-204ENST00000520823 CUX2O14529 1486 aa7.96□□□□□ -1.14
SMG1P3-204ENST00000520823 RAPGEF2Q9Y4G8 1499 aa7.95□□□□□ -1.14
SMG1P3-204ENST00000520823 CLIP1P30622 1438 aa7.95□□□□□ -1.14
SMG1P3-204ENST00000520823 CUL7Q14999 1698 aa7.94□□□□□ -1.14
SMG1P3-204ENST00000520823 POLA1P09884 1462 aaPredicted RBP7.94□□□□□ -1.14
SMG1P3-204ENST00000520823 WDR97A6NE52 1622 aa7.94□□□□□ -1.14
SMG1P3-204ENST00000520823 NESP48681 1621 aa7.94□□□□□ -1.14
SMG1P3-204ENST00000520823 IGF1RP08069 1367 aa7.92□□□□□ -1.14
SMG1P3-204ENST00000520823 URB2Q14146 1524 aaKnown RBP7.92□□□□□ -1.14
SMG1P3-204ENST00000520823 VPS8Q8N3P4 1428 aa7.92□□□□□ -1.14
SMG1P3-204ENST00000520823 PCGF6Q9BYE7 350 aa7.92□□□□□ -1.14
SMG1P3-204ENST00000520823 MRC2Q9UBG0 1479 aa7.91□□□□□ -1.14
SMG1P3-204ENST00000520823 KIF21AQ7Z4S6 1674 aa7.9□□□□□ -1.14
SMG1P3-204ENST00000520823 CARMIL1Q5VZK9 1371 aa7.9□□□□□ -1.14
SMG1P3-204ENST00000520823 ADRA2BP18089 450 aa7.89□□□□□ -1.15
SMG1P3-204ENST00000520823 PPP6R1Q9UPN7 881 aa7.89□□□□□ -1.15
SMG1P3-204ENST00000520823 ABCA5Q8WWZ7 1642 aa7.89□□□□□ -1.15
SMG1P3-204ENST00000520823 EHMT2Q96KQ7 1210 aa7.87□□□□□ -1.15
SMG1P3-204ENST00000520823 WDR62O43379 1518 aa7.87□□□□□ -1.15
SMG1P3-204ENST00000520823 EFCAB5A4FU69 1503 aa7.86□□□□□ -1.15
SMG1P3-204ENST00000520823 TARBP1Q13395 1621 aaKnown RBP7.86□□□□□ -1.15
SMG1P3-204ENST00000520823 IFT140Q96RY7 1462 aa7.86□□□□□ -1.15
SMG1P3-204ENST00000520823 HRCP23327 699 aa7.85□□□□□ -1.15
SMG1P3-204ENST00000520823 GAPVD1Q14C86 1478 aa7.85□□□□□ -1.15
SMG1P3-204ENST00000520823 RAD54L2Q9Y4B4 1467 aa7.85□□□□□ -1.15
SMG1P3-204ENST00000520823 APLP2Q06481 763 aa7.85□□□□□ -1.15
SMG1P3-204ENST00000520823 ZEB1P37275 1124 aaPredicted RBP7.85□□□□□ -1.15
SMG1P3-204ENST00000520823 MAP3K1Q13233 1512 aa7.84□□□□□ -1.15
SMG1P3-204ENST00000520823 FHAD1B1AJZ9 1412 aa7.83□□□□□ -1.16
SMG1P3-204ENST00000520823 CTTNBP2Q8WZ74 1663 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms