RNA–Protein interactions for RNA: ENST00000520608.2

ZNF260-201, Transcript of zinc finger protein 260, humanhuman

TSL 3

Gene ZNF260, Length 330 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF260-201ENST00000520608 AEBP2Q6ZN18 517 aaPredicted RBP24.26■■□□□ 1.47
ZNF260-201ENST00000520608 CHIC1Q5VXU3 224 aa22.77■■□□□ 1.24
ZNF260-201ENST00000520608 NISCHQ9Y2I1 1504 aa21.33■■□□□ 1
ZNF260-201ENST00000520608 SENP3Q9H4L4 574 aaPredicted RBP20.88■□□□□ 0.93
ZNF260-201ENST00000520608 PHF23Q9BUL5 403 aaPredicted RBP20.48■□□□□ 0.87
ZNF260-201ENST00000520608 FOXD1Q16676 465 aa19.47■□□□□ 0.71
ZNF260-201ENST00000520608 ABCC9O60706 1549 aa19.25■□□□□ 0.67
ZNF260-201ENST00000520608 CCDC180Q9P1Z9 1646 aa19.17■□□□□ 0.66
ZNF260-201ENST00000520608 POTEDQ86YR6 584 aa19.04■□□□□ 0.64
ZNF260-201ENST00000520608 MSH5O43196 834 aa18.53■□□□□ 0.56
ZNF260-201ENST00000520608 RB1CC1Q8TDY2 1594 aa18.29■□□□□ 0.52
ZNF260-201ENST00000520608 NACADO15069 1562 aa18.13■□□□□ 0.49
ZNF260-201ENST00000520608 PIAS4Q8N2W9 510 aaPredicted RBP18.11■□□□□ 0.49
ZNF260-201ENST00000520608 DCAF8L2P0C7V8 631 aa18.1■□□□□ 0.49
ZNF260-201ENST00000520608 DNAJC5BQ9UF47 199 aa18.04■□□□□ 0.48
ZNF260-201ENST00000520608 PABPN1Q86U42 306 aaKnown RBP eCLIP17.91■□□□□ 0.46
ZNF260-201ENST00000520608 UNC13AQ9UPW8 1703 aa17.85■□□□□ 0.45
ZNF260-201ENST00000520608 MYO15BQ96JP2 1530 aa17.82■□□□□ 0.44
ZNF260-201ENST00000520608 PLPPR3Q6T4P5 718 aa17.76■□□□□ 0.43
ZNF260-201ENST00000520608 BICRAQ9NZM4 1560 aa17.72■□□□□ 0.43
ZNF260-201ENST00000520608 PPP6R1Q9UPN7 881 aa17.72■□□□□ 0.43
ZNF260-201ENST00000520608 ZCCHC6Q5VYS8 1495 aaKnown RBP17.67■□□□□ 0.42
ZNF260-201ENST00000520608 ADRA2BP18089 450 aa17.65■□□□□ 0.42
ZNF260-201ENST00000520608 DCAF1Q9Y4B6 1507 aa17.58■□□□□ 0.41
ZNF260-201ENST00000520608 SCRIBQ14160 1630 aa17.51■□□□□ 0.39
ZNF260-201ENST00000520608 SHROOM4Q9ULL8 1493 aa17.48■□□□□ 0.39
ZNF260-201ENST00000520608 CC2D2AQ9P2K1 1620 aa17.37■□□□□ 0.37
ZNF260-201ENST00000520608 CECR2Q9BXF3 1484 aa17.34■□□□□ 0.37
ZNF260-201ENST00000520608 EIF4G1Q04637 1599 aaKnown RBP17.32■□□□□ 0.36
ZNF260-201ENST00000520608 NCAPD3P42695 1498 aa16.71■□□□□ 0.27
ZNF260-201ENST00000520608 ATAD2BQ9ULI0 1458 aa16.67■□□□□ 0.26
ZNF260-201ENST00000520608 SMARCA4P51532 1647 aa16.67■□□□□ 0.26
ZNF260-201ENST00000520608 ERCC6Q03468 1493 aa16.65■□□□□ 0.26
ZNF260-201ENST00000520608 SMARCA2P51531 1590 aa16.64■□□□□ 0.25
ZNF260-201ENST00000520608 HMGXB3Q12766 1538 aa16.61■□□□□ 0.25
ZNF260-201ENST00000520608 DNAJC5Q9H3Z4 198 aa16.61■□□□□ 0.25
ZNF260-201ENST00000520608 CUX2O14529 1486 aa16.59■□□□□ 0.25
ZNF260-201ENST00000520608 BAZ1AQ9NRL2 1556 aaPredicted RBP16.58■□□□□ 0.24
ZNF260-201ENST00000520608 BAZ1BQ9UIG0 1483 aaKnown RBP16.54■□□□□ 0.24
ZNF260-201ENST00000520608 NESP48681 1621 aa16.51■□□□□ 0.23
ZNF260-201ENST00000520608 PEG3Q9GZU2 1588 aa16.47■□□□□ 0.23
ZNF260-201ENST00000520608 MROH2BQ7Z745 1585 aa16.44■□□□□ 0.22
ZNF260-201ENST00000520608 DMRT2Q9Y5R5 561 aa16.44■□□□□ 0.22
ZNF260-201ENST00000520608 MAPK8IP2Q13387 824 aaPredicted RBP16.38■□□□□ 0.21
ZNF260-201ENST00000520608 LAMC3Q9Y6N6 1575 aa16.38■□□□□ 0.21
ZNF260-201ENST00000520608 THOC2Q8NI27 1593 aaKnown RBP16.34■□□□□ 0.21
ZNF260-201ENST00000520608 KIF21AQ7Z4S6 1674 aa16.3■□□□□ 0.2
ZNF260-201ENST00000520608 PDS5BQ9NTI5 1447 aa16.29■□□□□ 0.2
ZNF260-201ENST00000520608 CACNB1Q02641 598 aaPredicted RBP16.26■□□□□ 0.19
ZNF260-201ENST00000520608 WIZO95785 1651 aa16.26■□□□□ 0.19
ZNF260-201ENST00000520608 SCAF1Q9H7N4 1312 aaKnown RBP16.24■□□□□ 0.19
ZNF260-201ENST00000520608 CADPSQ9ULU8 1353 aa16.23■□□□□ 0.19
ZNF260-201ENST00000520608 MRC2Q9UBG0 1479 aa16.16■□□□□ 0.18
ZNF260-201ENST00000520608 WDR62O43379 1518 aa16.11■□□□□ 0.17
ZNF260-201ENST00000520608 CEP164Q9UPV0 1460 aa16.1■□□□□ 0.17
ZNF260-201ENST00000520608 RSF1Q96T23 1441 aaPredicted RBP16.07■□□□□ 0.16
ZNF260-201ENST00000520608 FANCD2Q9BXW9 1451 aa16.06■□□□□ 0.16
ZNF260-201ENST00000520608 TOP2AP11388 1531 aaKnown RBP16.04■□□□□ 0.16
ZNF260-201ENST00000520608 CFTRP13569 1480 aa16.03■□□□□ 0.16
ZNF260-201ENST00000520608 TRIM41Q8WV44 630 aa15.94■□□□□ 0.14
ZNF260-201ENST00000520608 URB2Q14146 1524 aaKnown RBP15.92■□□□□ 0.14
ZNF260-201ENST00000520608 PRDM2Q13029 1718 aa15.88■□□□□ 0.13
ZNF260-201ENST00000520608 DCAF8L1A6NGE4 600 aa15.86■□□□□ 0.13
ZNF260-201ENST00000520608 CCDC88BA6NC98 1476 aa15.85■□□□□ 0.13
ZNF260-201ENST00000520608 OSCARQ8IYS5 282 aa15.82■□□□□ 0.12
ZNF260-201ENST00000520608 IFT140Q96RY7 1462 aa15.76■□□□□ 0.11
ZNF260-201ENST00000520608 TOPBP1Q92547 1522 aa15.74■□□□□ 0.11
ZNF260-201ENST00000520608 ZNF608Q9ULD9 1512 aaPredicted RBP15.74■□□□□ 0.11
ZNF260-201ENST00000520608 RNF39Q9H2S5 420 aa15.71■□□□□ 0.11
ZNF260-201ENST00000520608 ABCC8Q09428 1581 aa15.69■□□□□ 0.1
ZNF260-201ENST00000520608 DNMBPQ6XZF7 1577 aa15.69■□□□□ 0.1
ZNF260-201ENST00000520608 EIF4G3O43432 1585 aaKnown RBP15.67■□□□□ 0.1
ZNF260-201ENST00000520608 RIMBP3CA6NJZ7 1639 aa15.64■□□□□ 0.09
ZNF260-201ENST00000520608 RIMBP3BA6NNM3 1639 aa15.64■□□□□ 0.09
ZNF260-201ENST00000520608 RIMBP3Q9UFD9 1639 aa15.64■□□□□ 0.09
ZNF260-201ENST00000520608 TARBP1Q13395 1621 aaKnown RBP15.6■□□□□ 0.09
ZNF260-201ENST00000520608 AQRO60306 1485 aaKnown RBP eCLIP15.59■□□□□ 0.09
ZNF260-201ENST00000520608 POLA1P09884 1462 aaPredicted RBP15.59■□□□□ 0.09
ZNF260-201ENST00000520608 ARHGEF11O15085 1522 aa15.58■□□□□ 0.09
ZNF260-201ENST00000520608 HOXD11P31277 338 aaPredicted RBP15.58■□□□□ 0.08
ZNF260-201ENST00000520608 CHD1O14646 1710 aa15.56■□□□□ 0.08
ZNF260-201ENST00000520608 FBLN2P98095 1184 aa15.55■□□□□ 0.08
ZNF260-201ENST00000520608 RAD54L2Q9Y4B4 1467 aa15.53■□□□□ 0.08
ZNF260-201ENST00000520608 SOGA1O94964 1423 aa15.51■□□□□ 0.07
ZNF260-201ENST00000520608 TDRD9Q8NDG6 1382 aaKnown RBP15.49■□□□□ 0.07
ZNF260-201ENST00000520608 FGD5Q6ZNL6 1462 aa15.49■□□□□ 0.07
ZNF260-201ENST00000520608 PPP4R3CPQ6ZMV5 832 aa15.49■□□□□ 0.07
ZNF260-201ENST00000520608 C1QBPQ07021 282 aaKnown RBP15.47■□□□□ 0.07
ZNF260-201ENST00000520608 CYB5RLQ6IPT4 315 aa15.47■□□□□ 0.07
ZNF260-201ENST00000520608 CUX1P39880 1505 aa15.46■□□□□ 0.07
ZNF260-201ENST00000520608 SNAPC4Q5SXM2 1469 aa15.46■□□□□ 0.06
ZNF260-201ENST00000520608 WDR97A6NE52 1622 aa15.43■□□□□ 0.06
ZNF260-201ENST00000520608 ARAP1Q96P48 1450 aa15.42■□□□□ 0.06
ZNF260-201ENST00000520608 CHMP7Q8WUX9 453 aaPredicted RBP15.4■□□□□ 0.06
ZNF260-201ENST00000520608 SUPT5HO00267 1087 aaKnown RBP15.39■□□□□ 0.05
ZNF260-201ENST00000520608 GRIN2BQ13224 1484 aa15.39■□□□□ 0.05
ZNF260-201ENST00000520608 MAGI1Q96QZ7 1491 aaPredicted RBP15.39■□□□□ 0.05
ZNF260-201ENST00000520608 SYNJ1O43426 1573 aa15.36■□□□□ 0.05
ZNF260-201ENST00000520608 TRHP20396 242 aaPredicted RBP15.36■□□□□ 0.05
ZNF260-201ENST00000520608 CLASP1Q7Z460 1538 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms