RNA–Protein interactions for RNA: ENST00000520482.1

DENND3-212, Transcript of DENN domain containing 3, humanhuman

TSL 2

Gene DENND3, Length 2,883 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND3-212ENST00000520482 NISCHQ9Y2I1 1504 aa25.92■■□□□ 1.74
DENND3-212ENST00000520482 CCDC180Q9P1Z9 1646 aa22.29■■□□□ 1.16
DENND3-212ENST00000520482 SHROOM4Q9ULL8 1493 aa22.07■■□□□ 1.12
DENND3-212ENST00000520482 ZCCHC6Q5VYS8 1495 aaKnown RBP21.89■■□□□ 1.09
DENND3-212ENST00000520482 DCAF8L2P0C7V8 631 aa21.77■■□□□ 1.08
DENND3-212ENST00000520482 ABCC9O60706 1549 aa21.62■■□□□ 1.05
DENND3-212ENST00000520482 SUPT5HO00267 1087 aaKnown RBP21.56■■□□□ 1.04
DENND3-212ENST00000520482 DCAF1Q9Y4B6 1507 aa21.22■□□□□ 0.99
DENND3-212ENST00000520482 NACADO15069 1562 aa20.88■□□□□ 0.93
DENND3-212ENST00000520482 CHIC1Q5VXU3 224 aa20.86■□□□□ 0.93
DENND3-212ENST00000520482 MYO15BQ96JP2 1530 aa20.85■□□□□ 0.93
DENND3-212ENST00000520482 SCRIBQ14160 1630 aa20.8■□□□□ 0.92
DENND3-212ENST00000520482 RB1CC1Q8TDY2 1594 aa20.77■□□□□ 0.92
DENND3-212ENST00000520482 PABPN1Q86U42 306 aaKnown RBP eCLIP20.51■□□□□ 0.87
DENND3-212ENST00000520482 RSF1Q96T23 1441 aaPredicted RBP20.46■□□□□ 0.87
DENND3-212ENST00000520482 UNC13AQ9UPW8 1703 aa20.36■□□□□ 0.85
DENND3-212ENST00000520482 LOC105371045A0A1W2PR82 267 aa20.27■□□□□ 0.84
DENND3-212ENST00000520482 CECR2Q9BXF3 1484 aa20.26■□□□□ 0.83
DENND3-212ENST00000520482 BICRAQ9NZM4 1560 aa20.23■□□□□ 0.83
DENND3-212ENST00000520482 MROH2BQ7Z745 1585 aa20.17■□□□□ 0.82
DENND3-212ENST00000520482 PCGF6Q9BYE7 350 aa20.08■□□□□ 0.8
DENND3-212ENST00000520482 WIZO95785 1651 aa20.07■□□□□ 0.8
DENND3-212ENST00000520482 TRIM41Q8WV44 630 aa20.06■□□□□ 0.8
DENND3-212ENST00000520482 HRCP23327 699 aa19.98■□□□□ 0.79
DENND3-212ENST00000520482 FAM9AQ8IZU1 332 aaPredicted RBP19.95■□□□□ 0.78
DENND3-212ENST00000520482 BAZ1AQ9NRL2 1556 aaPredicted RBP19.91■□□□□ 0.78
DENND3-212ENST00000520482 EHMT2Q96KQ7 1210 aa19.81■□□□□ 0.76
DENND3-212ENST00000520482 PELP1Q8IZL8 1130 aaKnown RBP19.79■□□□□ 0.76
DENND3-212ENST00000520482 SMARCA4P51532 1647 aa19.79■□□□□ 0.76
DENND3-212ENST00000520482 TOP2AP11388 1531 aaKnown RBP19.71■□□□□ 0.75
DENND3-212ENST00000520482 EIF4G1Q04637 1599 aaKnown RBP19.7■□□□□ 0.74
DENND3-212ENST00000520482 TRIM26Q12899 539 aaPredicted RBP19.69■□□□□ 0.74
DENND3-212ENST00000520482 CCDC88BA6NC98 1476 aa19.65■□□□□ 0.74
DENND3-212ENST00000520482 PPARGC1BQ86YN6 1023 aaKnown RBP19.62■□□□□ 0.73
DENND3-212ENST00000520482 SMARCA2P51531 1590 aa19.62■□□□□ 0.73
DENND3-212ENST00000520482 ABCC8Q09428 1581 aa19.57■□□□□ 0.72
DENND3-212ENST00000520482 ATAD2BQ9ULI0 1458 aa19.57■□□□□ 0.72
DENND3-212ENST00000520482 BAZ1BQ9UIG0 1483 aaKnown RBP19.46■□□□□ 0.71
DENND3-212ENST00000520482 PEG3Q9GZU2 1588 aa19.44■□□□□ 0.7
DENND3-212ENST00000520482 CC2D2AQ9P2K1 1620 aa19.41■□□□□ 0.7
DENND3-212ENST00000520482 NCAPD3P42695 1498 aa19.36■□□□□ 0.69
DENND3-212ENST00000520482 SOGA1O94964 1423 aa19.35■□□□□ 0.69
DENND3-212ENST00000520482 DNAJC5BQ9UF47 199 aa19.33■□□□□ 0.69
DENND3-212ENST00000520482 MYT1Q01538 1121 aa19.31■□□□□ 0.68
DENND3-212ENST00000520482 RUSC2Q8N2Y8 1516 aa19.28■□□□□ 0.68
DENND3-212ENST00000520482 HMGXB3Q12766 1538 aa19.23■□□□□ 0.67
DENND3-212ENST00000520482 WRNQ14191 1432 aaPredicted RBP eCLIP19.22■□□□□ 0.67
DENND3-212ENST00000520482 CSRNP3Q8WYN3 585 aa19.21■□□□□ 0.67
DENND3-212ENST00000520482 CEP162Q5TB80 1403 aa19.17■□□□□ 0.66
DENND3-212ENST00000520482 EEA1Q15075 1411 aa19.16■□□□□ 0.66
DENND3-212ENST00000520482 SYNJ1O43426 1573 aa19.16■□□□□ 0.66
DENND3-212ENST00000520482 ZEB1P37275 1124 aaPredicted RBP19.15■□□□□ 0.66
DENND3-212ENST00000520482 UBTFP17480 764 aaKnown RBP19.15■□□□□ 0.66
DENND3-212ENST00000520482 TNIKQ9UKE5 1360 aa19.13■□□□□ 0.65
DENND3-212ENST00000520482 TTBK1Q5TCY1 1321 aaPredicted RBP19.13■□□□□ 0.65
DENND3-212ENST00000520482 GOLGA3Q08378 1498 aa19.06■□□□□ 0.64
DENND3-212ENST00000520482 SCAF1Q9H7N4 1312 aaKnown RBP19■□□□□ 0.63
DENND3-212ENST00000520482 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.99■□□□□ 0.63
DENND3-212ENST00000520482 CEP164Q9UPV0 1460 aa18.96■□□□□ 0.63
DENND3-212ENST00000520482 NESP48681 1621 aa18.95■□□□□ 0.62
DENND3-212ENST00000520482 CADPSQ9ULU8 1353 aa18.94■□□□□ 0.62
DENND3-212ENST00000520482 KIF21BO75037 1637 aa18.93■□□□□ 0.62
DENND3-212ENST00000520482 CFTRP13569 1480 aa18.92■□□□□ 0.62
DENND3-212ENST00000520482 TOP2BQ02880 1626 aa18.91■□□□□ 0.62
DENND3-212ENST00000520482 CCER1Q8TC90 406 aaPredicted RBP18.91■□□□□ 0.62
DENND3-212ENST00000520482 RAPGEF2Q9Y4G8 1499 aa18.88■□□□□ 0.61
DENND3-212ENST00000520482 RANGAP1P46060 587 aaPredicted RBP18.86■□□□□ 0.61
DENND3-212ENST00000520482 CLIP1P30622 1438 aa18.85■□□□□ 0.61
DENND3-212ENST00000520482 BIVM-ERCC5R4GMW8 1640 aa18.84■□□□□ 0.61
DENND3-212ENST00000520482 CUX1P39880 1505 aa18.78■□□□□ 0.6
DENND3-212ENST00000520482 FANCD2Q9BXW9 1451 aa18.73■□□□□ 0.59
DENND3-212ENST00000520482 VPS8Q8N3P4 1428 aa18.73■□□□□ 0.59
DENND3-212ENST00000520482 PRXQ9BXM0 1461 aa18.68■□□□□ 0.58
DENND3-212ENST00000520482 APLP2Q06481 763 aa18.66■□□□□ 0.58
DENND3-212ENST00000520482 LAMC3Q9Y6N6 1575 aa18.65■□□□□ 0.58
DENND3-212ENST00000520482 HNRNPUL2Q1KMD3 747 aaKnown RBP18.65■□□□□ 0.58
DENND3-212ENST00000520482 ERICH3Q5RHP9 1530 aa18.64■□□□□ 0.57
DENND3-212ENST00000520482 KIF27Q86VH2 1401 aa18.64■□□□□ 0.57
DENND3-212ENST00000520482 PDS5BQ9NTI5 1447 aa18.62■□□□□ 0.57
DENND3-212ENST00000520482 PRDM2Q13029 1718 aa18.59■□□□□ 0.57
DENND3-212ENST00000520482 ARAP1Q96P48 1450 aa18.57■□□□□ 0.56
DENND3-212ENST00000520482 KIF21AQ7Z4S6 1674 aa18.53■□□□□ 0.56
DENND3-212ENST00000520482 CUX2O14529 1486 aa18.52■□□□□ 0.56
DENND3-212ENST00000520482 URB2Q14146 1524 aaKnown RBP18.52■□□□□ 0.55
DENND3-212ENST00000520482 FGD5Q6ZNL6 1462 aa18.5■□□□□ 0.55
DENND3-212ENST00000520482 ACIN1Q9UKV3 1341 aaKnown RBP18.5■□□□□ 0.55
DENND3-212ENST00000520482 TOPBP1Q92547 1522 aa18.49■□□□□ 0.55
DENND3-212ENST00000520482 ERCC6Q03468 1493 aa18.48■□□□□ 0.55
DENND3-212ENST00000520482 KANK4Q5T7N3 995 aaPredicted RBP18.48■□□□□ 0.55
DENND3-212ENST00000520482 RAD54L2Q9Y4B4 1467 aa18.47■□□□□ 0.55
DENND3-212ENST00000520482 IGF1RP08069 1367 aa18.46■□□□□ 0.55
DENND3-212ENST00000520482 DNMBPQ6XZF7 1577 aa18.43■□□□□ 0.54
DENND3-212ENST00000520482 ARHGAP35Q9NRY4 1499 aa18.43■□□□□ 0.54
DENND3-212ENST00000520482 DIEXFQ68CQ4 756 aaKnown RBP18.43■□□□□ 0.54
DENND3-212ENST00000520482 POLA1P09884 1462 aaPredicted RBP18.42■□□□□ 0.54
DENND3-212ENST00000520482 CARMIL1Q5VZK9 1371 aa18.39■□□□□ 0.53
DENND3-212ENST00000520482 MRC2Q9UBG0 1479 aa18.37■□□□□ 0.53
DENND3-212ENST00000520482 NEUROD1Q13562 356 aa18.37■□□□□ 0.53
DENND3-212ENST00000520482 PRKCSHP14314 528 aaPredicted RBP18.35■□□□□ 0.53
DENND3-212ENST00000520482 TDRD9Q8NDG6 1382 aaKnown RBP18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms