RNA–Protein interactions for RNA: ENST00000518815.1

MTCL1-207, Transcript of microtubule crosslinking factor 1, humanhuman

TSL 1 (best) BASIC

Gene MTCL1, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTCL1-207ENST00000518815 NISCHQ9Y2I1 1504 aa21.3■■□□□ 1
MTCL1-207ENST00000518815 CCDC180Q9P1Z9 1646 aa18.7■□□□□ 0.58
MTCL1-207ENST00000518815 DCAF8L2P0C7V8 631 aa18.02■□□□□ 0.48
MTCL1-207ENST00000518815 ZCCHC6Q5VYS8 1495 aaKnown RBP17.89■□□□□ 0.45
MTCL1-207ENST00000518815 DCAF1Q9Y4B6 1507 aa17.73■□□□□ 0.43
MTCL1-207ENST00000518815 MYO15BQ96JP2 1530 aa17.57■□□□□ 0.4
MTCL1-207ENST00000518815 ABCC9O60706 1549 aa17.49■□□□□ 0.39
MTCL1-207ENST00000518815 NACADO15069 1562 aa17.4■□□□□ 0.38
MTCL1-207ENST00000518815 SHROOM4Q9ULL8 1493 aa17.38■□□□□ 0.37
MTCL1-207ENST00000518815 RB1CC1Q8TDY2 1594 aa17.24■□□□□ 0.35
MTCL1-207ENST00000518815 SUPT5HO00267 1087 aaKnown RBP17.15■□□□□ 0.34
MTCL1-207ENST00000518815 SCRIBQ14160 1630 aa17.01■□□□□ 0.31
MTCL1-207ENST00000518815 UNC13AQ9UPW8 1703 aa16.79■□□□□ 0.28
MTCL1-207ENST00000518815 BICRAQ9NZM4 1560 aa16.62■□□□□ 0.25
MTCL1-207ENST00000518815 CHIC1Q5VXU3 224 aa16.53■□□□□ 0.24
MTCL1-207ENST00000518815 BAZ1AQ9NRL2 1556 aaPredicted RBP16.49■□□□□ 0.23
MTCL1-207ENST00000518815 RSF1Q96T23 1441 aaPredicted RBP16.46■□□□□ 0.23
MTCL1-207ENST00000518815 CECR2Q9BXF3 1484 aa16.44■□□□□ 0.22
MTCL1-207ENST00000518815 PABPN1Q86U42 306 aaKnown RBP eCLIP16.42■□□□□ 0.22
MTCL1-207ENST00000518815 EHMT2Q96KQ7 1210 aa16.39■□□□□ 0.21
MTCL1-207ENST00000518815 SMARCA4P51532 1647 aa16.38■□□□□ 0.21
MTCL1-207ENST00000518815 MROH2BQ7Z745 1585 aa16.38■□□□□ 0.21
MTCL1-207ENST00000518815 PEG3Q9GZU2 1588 aa16.25■□□□□ 0.19
MTCL1-207ENST00000518815 WIZO95785 1651 aa16.24■□□□□ 0.19
MTCL1-207ENST00000518815 SMARCA2P51531 1590 aa16.18■□□□□ 0.18
MTCL1-207ENST00000518815 TOP2AP11388 1531 aaKnown RBP16.17■□□□□ 0.18
MTCL1-207ENST00000518815 EIF4G1Q04637 1599 aaKnown RBP16.15■□□□□ 0.18
MTCL1-207ENST00000518815 FAM9AQ8IZU1 332 aaPredicted RBP16.1■□□□□ 0.17
MTCL1-207ENST00000518815 ATAD2BQ9ULI0 1458 aa16.1■□□□□ 0.17
MTCL1-207ENST00000518815 TRIM41Q8WV44 630 aa16.1■□□□□ 0.17
MTCL1-207ENST00000518815 HMGXB3Q12766 1538 aa16.03■□□□□ 0.16
MTCL1-207ENST00000518815 BAZ1BQ9UIG0 1483 aaKnown RBP16.02■□□□□ 0.16
MTCL1-207ENST00000518815 NCAPD3P42695 1498 aa16.02■□□□□ 0.15
MTCL1-207ENST00000518815 PCGF6Q9BYE7 350 aa15.97■□□□□ 0.15
MTCL1-207ENST00000518815 CCDC88BA6NC98 1476 aa15.93■□□□□ 0.14
MTCL1-207ENST00000518815 LOC105371045A0A1W2PR82 267 aa15.93■□□□□ 0.14
MTCL1-207ENST00000518815 HRCP23327 699 aa15.92■□□□□ 0.14
MTCL1-207ENST00000518815 CC2D2AQ9P2K1 1620 aa15.9■□□□□ 0.14
MTCL1-207ENST00000518815 TRIM26Q12899 539 aaPredicted RBP15.84■□□□□ 0.13
MTCL1-207ENST00000518815 TTBK1Q5TCY1 1321 aaPredicted RBP15.74■□□□□ 0.11
MTCL1-207ENST00000518815 ZEB1P37275 1124 aaPredicted RBP15.69■□□□□ 0.1
MTCL1-207ENST00000518815 RANGAP1P46060 587 aaPredicted RBP15.68■□□□□ 0.1
MTCL1-207ENST00000518815 CFTRP13569 1480 aa15.63■□□□□ 0.09
MTCL1-207ENST00000518815 PRDM2Q13029 1718 aa15.63■□□□□ 0.09
MTCL1-207ENST00000518815 PPARGC1BQ86YN6 1023 aaKnown RBP15.62■□□□□ 0.09
MTCL1-207ENST00000518815 APLP2Q06481 763 aa15.59■□□□□ 0.09
MTCL1-207ENST00000518815 CADPSQ9ULU8 1353 aa15.58■□□□□ 0.08
MTCL1-207ENST00000518815 WRNQ14191 1432 aaPredicted RBP eCLIP15.53■□□□□ 0.08
MTCL1-207ENST00000518815 ABCC8Q09428 1581 aa15.52■□□□□ 0.08
MTCL1-207ENST00000518815 LAMC3Q9Y6N6 1575 aa15.51■□□□□ 0.07
MTCL1-207ENST00000518815 EEA1Q15075 1411 aa15.5■□□□□ 0.07
MTCL1-207ENST00000518815 UBTFP17480 764 aaKnown RBP15.5■□□□□ 0.07
MTCL1-207ENST00000518815 BIVM-ERCC5R4GMW8 1640 aa15.44■□□□□ 0.06
MTCL1-207ENST00000518815 TOP2BQ02880 1626 aa15.44■□□□□ 0.06
MTCL1-207ENST00000518815 SYNJ1O43426 1573 aa15.41■□□□□ 0.06
MTCL1-207ENST00000518815 CSRNP3Q8WYN3 585 aa15.39■□□□□ 0.05
MTCL1-207ENST00000518815 FANCD2Q9BXW9 1451 aa15.38■□□□□ 0.05
MTCL1-207ENST00000518815 PDS5BQ9NTI5 1447 aa15.37■□□□□ 0.05
MTCL1-207ENST00000518815 DNAJC5BQ9UF47 199 aa15.34■□□□□ 0.05
MTCL1-207ENST00000518815 ATP1B4Q9UN42 357 aaPredicted RBP15.34■□□□□ 0.05
MTCL1-207ENST00000518815 CUX1P39880 1505 aa15.34■□□□□ 0.05
MTCL1-207ENST00000518815 NESP48681 1621 aa15.32■□□□□ 0.04
MTCL1-207ENST00000518815 CEP164Q9UPV0 1460 aa15.32■□□□□ 0.04
MTCL1-207ENST00000518815 TNIKQ9UKE5 1360 aa15.31■□□□□ 0.04
MTCL1-207ENST00000518815 DNMBPQ6XZF7 1577 aa15.29■□□□□ 0.04
MTCL1-207ENST00000518815 GOLGA3Q08378 1498 aa15.27■□□□□ 0.04
MTCL1-207ENST00000518815 CEP162Q5TB80 1403 aa15.25■□□□□ 0.03
MTCL1-207ENST00000518815 CCER1Q8TC90 406 aaPredicted RBP15.24■□□□□ 0.03
MTCL1-207ENST00000518815 SOGA1O94964 1423 aa15.23■□□□□ 0.03
MTCL1-207ENST00000518815 TOPBP1Q92547 1522 aa15.22■□□□□ 0.03
MTCL1-207ENST00000518815 KIF21AQ7Z4S6 1674 aa15.21■□□□□ 0.03
MTCL1-207ENST00000518815 FGD5Q6ZNL6 1462 aa15.19■□□□□ 0.02
MTCL1-207ENST00000518815 KIF27Q86VH2 1401 aa15.18■□□□□ 0.02
MTCL1-207ENST00000518815 URB2Q14146 1524 aaKnown RBP15.16■□□□□ 0.02
MTCL1-207ENST00000518815 MRC2Q9UBG0 1479 aa15.15■□□□□ 0.02
MTCL1-207ENST00000518815 KIF21BO75037 1637 aa15.15■□□□□ 0.02
MTCL1-207ENST00000518815 PELP1Q8IZL8 1130 aaKnown RBP15.15■□□□□ 0.02
MTCL1-207ENST00000518815 RUSC2Q8N2Y8 1516 aa15.13■□□□□ 0.01
MTCL1-207ENST00000518815 POLA1P09884 1462 aaPredicted RBP15.12■□□□□ 0.01
MTCL1-207ENST00000518815 ABCA10Q8WWZ4 1543 aa15.11■□□□□ 0.01
MTCL1-207ENST00000518815 CUX2O14529 1486 aa15.08■□□□□ 0
MTCL1-207ENST00000518815 WDR62O43379 1518 aa15.08■□□□□ 0
MTCL1-207ENST00000518815 ERCC6Q03468 1493 aa15.07■□□□□ 0
MTCL1-207ENST00000518815 ERICH3Q5RHP9 1530 aa15.07■□□□□ 0
MTCL1-207ENST00000518815 CLIP1P30622 1438 aa15.07■□□□□ 0
MTCL1-207ENST00000518815 WDR97A6NE52 1622 aa15.06■□□□□ 0
MTCL1-207ENST00000518815 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.05■□□□□ -0
MTCL1-207ENST00000518815 PRXQ9BXM0 1461 aa15.04■□□□□ -0
MTCL1-207ENST00000518815 THOC2Q8NI27 1593 aaKnown RBP15.01□□□□□ -0.01
MTCL1-207ENST00000518815 RAD54L2Q9Y4B4 1467 aa15.01□□□□□ -0.01
MTCL1-207ENST00000518815 TARBP1Q13395 1621 aaKnown RBP15□□□□□ -0.01
MTCL1-207ENST00000518815 IFT140Q96RY7 1462 aa14.99□□□□□ -0.01
MTCL1-207ENST00000518815 IGF1RP08069 1367 aa14.98□□□□□ -0.01
MTCL1-207ENST00000518815 CUL7Q14999 1698 aa14.98□□□□□ -0.01
MTCL1-207ENST00000518815 ABCA5Q8WWZ7 1642 aa14.98□□□□□ -0.01
MTCL1-207ENST00000518815 VPS8Q8N3P4 1428 aa14.97□□□□□ -0.01
MTCL1-207ENST00000518815 ITGAEP38570 1179 aa14.96□□□□□ -0.02
MTCL1-207ENST00000518815 YTHDC1Q96MU7 727 aaKnown RBP14.95□□□□□ -0.02
MTCL1-207ENST00000518815 RAPGEF2Q9Y4G8 1499 aa14.95□□□□□ -0.02
MTCL1-207ENST00000518815 GAPVD1Q14C86 1478 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms