RNA–Protein interactions for RNA: ENST00000518059.5

UBXN8-204, Transcript of UBX domain protein 8, humanhuman

TSL 3

Gene UBXN8, Length 493 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN8-204ENST00000518059 AEBP2Q6ZN18 517 aaPredicted RBP16.58■□□□□ 0.24
UBXN8-204ENST00000518059 CHIC1Q5VXU3 224 aa16.23■□□□□ 0.19
UBXN8-204ENST00000518059 NISCHQ9Y2I1 1504 aa16.15■□□□□ 0.18
UBXN8-204ENST00000518059 PHF23Q9BUL5 403 aaPredicted RBP14.26□□□□□ -0.13
UBXN8-204ENST00000518059 SENP3Q9H4L4 574 aaPredicted RBP14.08□□□□□ -0.16
UBXN8-204ENST00000518059 CCDC180Q9P1Z9 1646 aa14.01□□□□□ -0.17
UBXN8-204ENST00000518059 ZCCHC6Q5VYS8 1495 aaKnown RBP13.63□□□□□ -0.23
UBXN8-204ENST00000518059 DCAF1Q9Y4B6 1507 aa13.38□□□□□ -0.27
UBXN8-204ENST00000518059 SHROOM4Q9ULL8 1493 aa13.35□□□□□ -0.27
UBXN8-204ENST00000518059 DCAF8L2P0C7V8 631 aa13.25□□□□□ -0.29
UBXN8-204ENST00000518059 PLPPR3Q6T4P5 718 aa13.17□□□□□ -0.3
UBXN8-204ENST00000518059 MYO15BQ96JP2 1530 aa13.12□□□□□ -0.31
UBXN8-204ENST00000518059 FOXD1Q16676 465 aa13.05□□□□□ -0.32
UBXN8-204ENST00000518059 NACADO15069 1562 aa12.98□□□□□ -0.33
UBXN8-204ENST00000518059 ABCC9O60706 1549 aa12.98□□□□□ -0.33
UBXN8-204ENST00000518059 SUPT5HO00267 1087 aaKnown RBP12.97□□□□□ -0.33
UBXN8-204ENST00000518059 SCRIBQ14160 1630 aa12.9□□□□□ -0.34
UBXN8-204ENST00000518059 RB1CC1Q8TDY2 1594 aa12.82□□□□□ -0.36
UBXN8-204ENST00000518059 RSF1Q96T23 1441 aaPredicted RBP12.61□□□□□ -0.39
UBXN8-204ENST00000518059 PPP6R1Q9UPN7 881 aa12.56□□□□□ -0.4
UBXN8-204ENST00000518059 ADRA2BP18089 450 aa12.51□□□□□ -0.41
UBXN8-204ENST00000518059 UNC13AQ9UPW8 1703 aa12.51□□□□□ -0.41
UBXN8-204ENST00000518059 BAZ1AQ9NRL2 1556 aaPredicted RBP12.48□□□□□ -0.41
UBXN8-204ENST00000518059 CECR2Q9BXF3 1484 aa12.48□□□□□ -0.41
UBXN8-204ENST00000518059 MROH2BQ7Z745 1585 aa12.47□□□□□ -0.41
UBXN8-204ENST00000518059 SMARCA4P51532 1647 aa12.38□□□□□ -0.43
UBXN8-204ENST00000518059 WIZO95785 1651 aa12.38□□□□□ -0.43
UBXN8-204ENST00000518059 BICRAQ9NZM4 1560 aa12.35□□□□□ -0.43
UBXN8-204ENST00000518059 TOP2AP11388 1531 aaKnown RBP12.32□□□□□ -0.44
UBXN8-204ENST00000518059 PIAS4Q8N2W9 510 aaPredicted RBP12.26□□□□□ -0.45
UBXN8-204ENST00000518059 PABPN1Q86U42 306 aaKnown RBP eCLIP12.25□□□□□ -0.45
UBXN8-204ENST00000518059 TRIM41Q8WV44 630 aa12.2□□□□□ -0.46
UBXN8-204ENST00000518059 PEG3Q9GZU2 1588 aa12.2□□□□□ -0.46
UBXN8-204ENST00000518059 MSH5O43196 834 aa12.18□□□□□ -0.46
UBXN8-204ENST00000518059 SMARCA2P51531 1590 aa12.18□□□□□ -0.46
UBXN8-204ENST00000518059 EIF4G1Q04637 1599 aaKnown RBP12.17□□□□□ -0.46
UBXN8-204ENST00000518059 CCDC88BA6NC98 1476 aa12.14□□□□□ -0.47
UBXN8-204ENST00000518059 ATAD2BQ9ULI0 1458 aa12.09□□□□□ -0.47
UBXN8-204ENST00000518059 BAZ1BQ9UIG0 1483 aaKnown RBP12.08□□□□□ -0.48
UBXN8-204ENST00000518059 POTEDQ86YR6 584 aa12.05□□□□□ -0.48
UBXN8-204ENST00000518059 LOC105371045A0A1W2PR82 267 aa12.02□□□□□ -0.49
UBXN8-204ENST00000518059 HMGXB3Q12766 1538 aa11.99□□□□□ -0.49
UBXN8-204ENST00000518059 ABCC8Q09428 1581 aa11.96□□□□□ -0.49
UBXN8-204ENST00000518059 FAM9AQ8IZU1 332 aaPredicted RBP11.96□□□□□ -0.49
UBXN8-204ENST00000518059 NCAPD3P42695 1498 aa11.94□□□□□ -0.5
UBXN8-204ENST00000518059 EEA1Q15075 1411 aa11.92□□□□□ -0.5
UBXN8-204ENST00000518059 WRNQ14191 1432 aaPredicted RBP eCLIP11.89□□□□□ -0.51
UBXN8-204ENST00000518059 SYNJ1O43426 1573 aa11.81□□□□□ -0.52
UBXN8-204ENST00000518059 PCGF6Q9BYE7 350 aa11.8□□□□□ -0.52
UBXN8-204ENST00000518059 SOGA1O94964 1423 aa11.78□□□□□ -0.52
UBXN8-204ENST00000518059 TRIM26Q12899 539 aaPredicted RBP11.77□□□□□ -0.53
UBXN8-204ENST00000518059 EHMT2Q96KQ7 1210 aa11.77□□□□□ -0.53
UBXN8-204ENST00000518059 TOP2BQ02880 1626 aa11.77□□□□□ -0.53
UBXN8-204ENST00000518059 BIVM-ERCC5R4GMW8 1640 aa11.76□□□□□ -0.53
UBXN8-204ENST00000518059 PRDM2Q13029 1718 aa11.76□□□□□ -0.53
UBXN8-204ENST00000518059 CSRNP3Q8WYN3 585 aa11.75□□□□□ -0.53
UBXN8-204ENST00000518059 CFTRP13569 1480 aa11.75□□□□□ -0.53
UBXN8-204ENST00000518059 GOLGA3Q08378 1498 aa11.75□□□□□ -0.53
UBXN8-204ENST00000518059 CC2D2AQ9P2K1 1620 aa11.75□□□□□ -0.53
UBXN8-204ENST00000518059 TNIKQ9UKE5 1360 aa11.73□□□□□ -0.53
UBXN8-204ENST00000518059 CEP164Q9UPV0 1460 aa11.72□□□□□ -0.53
UBXN8-204ENST00000518059 KIF21BO75037 1637 aa11.71□□□□□ -0.53
UBXN8-204ENST00000518059 HRCP23327 699 aa11.7□□□□□ -0.54
UBXN8-204ENST00000518059 RUSC2Q8N2Y8 1516 aa11.7□□□□□ -0.54
UBXN8-204ENST00000518059 CEP162Q5TB80 1403 aa11.69□□□□□ -0.54
UBXN8-204ENST00000518059 CADPSQ9ULU8 1353 aa11.67□□□□□ -0.54
UBXN8-204ENST00000518059 UBTFP17480 764 aaKnown RBP11.66□□□□□ -0.54
UBXN8-204ENST00000518059 CUX1P39880 1505 aa11.65□□□□□ -0.54
UBXN8-204ENST00000518059 ERICH3Q5RHP9 1530 aa11.6□□□□□ -0.55
UBXN8-204ENST00000518059 KIF27Q86VH2 1401 aa11.6□□□□□ -0.55
UBXN8-204ENST00000518059 PPP4R3CPQ6ZMV5 832 aa11.58□□□□□ -0.56
UBXN8-204ENST00000518059 CLIP1P30622 1438 aa11.55□□□□□ -0.56
UBXN8-204ENST00000518059 FANCD2Q9BXW9 1451 aa11.55□□□□□ -0.56
UBXN8-204ENST00000518059 RAPGEF2Q9Y4G8 1499 aa11.55□□□□□ -0.56
UBXN8-204ENST00000518059 PRXQ9BXM0 1461 aa11.54□□□□□ -0.56
UBXN8-204ENST00000518059 LAMC3Q9Y6N6 1575 aa11.53□□□□□ -0.56
UBXN8-204ENST00000518059 DNMBPQ6XZF7 1577 aa11.51□□□□□ -0.57
UBXN8-204ENST00000518059 FGD5Q6ZNL6 1462 aa11.51□□□□□ -0.57
UBXN8-204ENST00000518059 ZEB1P37275 1124 aaPredicted RBP11.5□□□□□ -0.57
UBXN8-204ENST00000518059 SCAF1Q9H7N4 1312 aaKnown RBP11.5□□□□□ -0.57
UBXN8-204ENST00000518059 CUX2O14529 1486 aa11.5□□□□□ -0.57
UBXN8-204ENST00000518059 VPS8Q8N3P4 1428 aa11.49□□□□□ -0.57
UBXN8-204ENST00000518059 PPARGC1BQ86YN6 1023 aaKnown RBP11.45□□□□□ -0.58
UBXN8-204ENST00000518059 TOPBP1Q92547 1522 aa11.45□□□□□ -0.58
UBXN8-204ENST00000518059 PDS5BQ9NTI5 1447 aa11.44□□□□□ -0.58
UBXN8-204ENST00000518059 APLP2Q06481 763 aa11.44□□□□□ -0.58
UBXN8-204ENST00000518059 NESP48681 1621 aa11.44□□□□□ -0.58
UBXN8-204ENST00000518059 ABCA10Q8WWZ4 1543 aa11.41□□□□□ -0.58
UBXN8-204ENST00000518059 POLA1P09884 1462 aaPredicted RBP11.4□□□□□ -0.58
UBXN8-204ENST00000518059 IGF1RP08069 1367 aa11.4□□□□□ -0.59
UBXN8-204ENST00000518059 CARMIL1Q5VZK9 1371 aa11.39□□□□□ -0.59
UBXN8-204ENST00000518059 CUL7Q14999 1698 aa11.37□□□□□ -0.59
UBXN8-204ENST00000518059 ARAP1Q96P48 1450 aa11.37□□□□□ -0.59
UBXN8-204ENST00000518059 URB2Q14146 1524 aaKnown RBP11.36□□□□□ -0.59
UBXN8-204ENST00000518059 RANGAP1P46060 587 aaPredicted RBP11.36□□□□□ -0.59
UBXN8-204ENST00000518059 TTBK1Q5TCY1 1321 aaPredicted RBP11.35□□□□□ -0.59
UBXN8-204ENST00000518059 WDR97A6NE52 1622 aa11.35□□□□□ -0.59
UBXN8-204ENST00000518059 MAPK8IP2Q13387 824 aaPredicted RBP11.35□□□□□ -0.59
UBXN8-204ENST00000518059 RAD54L2Q9Y4B4 1467 aa11.35□□□□□ -0.59
UBXN8-204ENST00000518059 KIF21AQ7Z4S6 1674 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms