RNA–Protein interactions for RNA: ENST00000517955.2

ARFGEF1-202, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARFGEF1, Length 1,235 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-202ENST00000517955 AEBP2Q6ZN18 517 aaPredicted RBP27.96■■■□□ 2.07
ARFGEF1-202ENST00000517955 NISCHQ9Y2I1 1504 aa27.02■■□□□ 1.92
ARFGEF1-202ENST00000517955 CHIC1Q5VXU3 224 aa26.98■■□□□ 1.91
ARFGEF1-202ENST00000517955 CCDC180Q9P1Z9 1646 aa23.84■■□□□ 1.41
ARFGEF1-202ENST00000517955 SENP3Q9H4L4 574 aaPredicted RBP23.83■■□□□ 1.41
ARFGEF1-202ENST00000517955 PHF23Q9BUL5 403 aaPredicted RBP23.66■■□□□ 1.38
ARFGEF1-202ENST00000517955 ABCC9O60706 1549 aa22.78■■□□□ 1.24
ARFGEF1-202ENST00000517955 ZCCHC6Q5VYS8 1495 aaKnown RBP22.6■■□□□ 1.21
ARFGEF1-202ENST00000517955 DCAF1Q9Y4B6 1507 aa22.46■■□□□ 1.19
ARFGEF1-202ENST00000517955 MYO15BQ96JP2 1530 aa22.41■■□□□ 1.18
ARFGEF1-202ENST00000517955 NACADO15069 1562 aa22.32■■□□□ 1.16
ARFGEF1-202ENST00000517955 DCAF8L2P0C7V8 631 aa22.24■■□□□ 1.15
ARFGEF1-202ENST00000517955 RB1CC1Q8TDY2 1594 aa22.19■■□□□ 1.14
ARFGEF1-202ENST00000517955 FOXD1Q16676 465 aa22.13■■□□□ 1.13
ARFGEF1-202ENST00000517955 PLPPR3Q6T4P5 718 aa21.75■■□□□ 1.07
ARFGEF1-202ENST00000517955 SCRIBQ14160 1630 aa21.67■■□□□ 1.06
ARFGEF1-202ENST00000517955 UNC13AQ9UPW8 1703 aa21.66■■□□□ 1.06
ARFGEF1-202ENST00000517955 BICRAQ9NZM4 1560 aa21.51■■□□□ 1.03
ARFGEF1-202ENST00000517955 SHROOM4Q9ULL8 1493 aa21.45■■□□□ 1.03
ARFGEF1-202ENST00000517955 PABPN1Q86U42 306 aaKnown RBP eCLIP21.35■■□□□ 1.01
ARFGEF1-202ENST00000517955 PPP6R1Q9UPN7 881 aa21■□□□□ 0.95
ARFGEF1-202ENST00000517955 CECR2Q9BXF3 1484 aa20.95■□□□□ 0.94
ARFGEF1-202ENST00000517955 ADRA2BP18089 450 aa20.94■□□□□ 0.94
ARFGEF1-202ENST00000517955 BAZ1AQ9NRL2 1556 aaPredicted RBP20.91■□□□□ 0.94
ARFGEF1-202ENST00000517955 EIF4G1Q04637 1599 aaKnown RBP20.89■□□□□ 0.93
ARFGEF1-202ENST00000517955 SMARCA4P51532 1647 aa20.85■□□□□ 0.93
ARFGEF1-202ENST00000517955 MROH2BQ7Z745 1585 aa20.79■□□□□ 0.92
ARFGEF1-202ENST00000517955 PIAS4Q8N2W9 510 aaPredicted RBP20.76■□□□□ 0.91
ARFGEF1-202ENST00000517955 RSF1Q96T23 1441 aaPredicted RBP20.75■□□□□ 0.91
ARFGEF1-202ENST00000517955 PEG3Q9GZU2 1588 aa20.72■□□□□ 0.91
ARFGEF1-202ENST00000517955 CC2D2AQ9P2K1 1620 aa20.67■□□□□ 0.9
ARFGEF1-202ENST00000517955 SMARCA2P51531 1590 aa20.64■□□□□ 0.9
ARFGEF1-202ENST00000517955 ATAD2BQ9ULI0 1458 aa20.64■□□□□ 0.89
ARFGEF1-202ENST00000517955 NCAPD3P42695 1498 aa20.61■□□□□ 0.89
ARFGEF1-202ENST00000517955 MSH5O43196 834 aa20.59■□□□□ 0.89
ARFGEF1-202ENST00000517955 WIZO95785 1651 aa20.57■□□□□ 0.88
ARFGEF1-202ENST00000517955 DNAJC5BQ9UF47 199 aa20.54■□□□□ 0.88
ARFGEF1-202ENST00000517955 HMGXB3Q12766 1538 aa20.53■□□□□ 0.88
ARFGEF1-202ENST00000517955 BAZ1BQ9UIG0 1483 aaKnown RBP20.46■□□□□ 0.87
ARFGEF1-202ENST00000517955 SUPT5HO00267 1087 aaKnown RBP20.45■□□□□ 0.86
ARFGEF1-202ENST00000517955 TOP2AP11388 1531 aaKnown RBP20.43■□□□□ 0.86
ARFGEF1-202ENST00000517955 CCDC88BA6NC98 1476 aa20.18■□□□□ 0.82
ARFGEF1-202ENST00000517955 CADPSQ9ULU8 1353 aa19.99■□□□□ 0.79
ARFGEF1-202ENST00000517955 CFTRP13569 1480 aa19.99■□□□□ 0.79
ARFGEF1-202ENST00000517955 LAMC3Q9Y6N6 1575 aa19.95■□□□□ 0.78
ARFGEF1-202ENST00000517955 NESP48681 1621 aa19.86■□□□□ 0.77
ARFGEF1-202ENST00000517955 PRDM2Q13029 1718 aa19.84■□□□□ 0.77
ARFGEF1-202ENST00000517955 PDS5BQ9NTI5 1447 aa19.8■□□□□ 0.76
ARFGEF1-202ENST00000517955 FANCD2Q9BXW9 1451 aa19.73■□□□□ 0.75
ARFGEF1-202ENST00000517955 CEP164Q9UPV0 1460 aa19.66■□□□□ 0.74
ARFGEF1-202ENST00000517955 KIF21AQ7Z4S6 1674 aa19.65■□□□□ 0.74
ARFGEF1-202ENST00000517955 ERCC6Q03468 1493 aa19.6■□□□□ 0.73
ARFGEF1-202ENST00000517955 ABCC8Q09428 1581 aa19.56■□□□□ 0.72
ARFGEF1-202ENST00000517955 MRC2Q9UBG0 1479 aa19.54■□□□□ 0.72
ARFGEF1-202ENST00000517955 WRNQ14191 1432 aaPredicted RBP eCLIP19.53■□□□□ 0.72
ARFGEF1-202ENST00000517955 THOC2Q8NI27 1593 aaKnown RBP19.5■□□□□ 0.71
ARFGEF1-202ENST00000517955 URB2Q14146 1524 aaKnown RBP19.5■□□□□ 0.71
ARFGEF1-202ENST00000517955 DNMBPQ6XZF7 1577 aa19.49■□□□□ 0.71
ARFGEF1-202ENST00000517955 WDR62O43379 1518 aa19.49■□□□□ 0.71
ARFGEF1-202ENST00000517955 CUX1P39880 1505 aa19.48■□□□□ 0.71
ARFGEF1-202ENST00000517955 TOPBP1Q92547 1522 aa19.47■□□□□ 0.71
ARFGEF1-202ENST00000517955 TOP2BQ02880 1626 aa19.46■□□□□ 0.71
ARFGEF1-202ENST00000517955 BIVM-ERCC5R4GMW8 1640 aa19.46■□□□□ 0.71
ARFGEF1-202ENST00000517955 SYNJ1O43426 1573 aa19.43■□□□□ 0.7
ARFGEF1-202ENST00000517955 POTEDQ86YR6 584 aa19.37■□□□□ 0.69
ARFGEF1-202ENST00000517955 TRIM41Q8WV44 630 aa19.35■□□□□ 0.69
ARFGEF1-202ENST00000517955 POLA1P09884 1462 aaPredicted RBP19.34■□□□□ 0.69
ARFGEF1-202ENST00000517955 CUX2O14529 1486 aa19.33■□□□□ 0.68
ARFGEF1-202ENST00000517955 FGD5Q6ZNL6 1462 aa19.33■□□□□ 0.68
ARFGEF1-202ENST00000517955 SOGA1O94964 1423 aa19.26■□□□□ 0.67
ARFGEF1-202ENST00000517955 IFT140Q96RY7 1462 aa19.26■□□□□ 0.67
ARFGEF1-202ENST00000517955 TARBP1Q13395 1621 aaKnown RBP19.24■□□□□ 0.67
ARFGEF1-202ENST00000517955 SCAF1Q9H7N4 1312 aaKnown RBP19.24■□□□□ 0.67
ARFGEF1-202ENST00000517955 DNAJC5Q9H3Z4 198 aa19.23■□□□□ 0.67
ARFGEF1-202ENST00000517955 ABCA10Q8WWZ4 1543 aa19.22■□□□□ 0.67
ARFGEF1-202ENST00000517955 RAD54L2Q9Y4B4 1467 aa19.21■□□□□ 0.67
ARFGEF1-202ENST00000517955 WDR97A6NE52 1622 aa19.18■□□□□ 0.66
ARFGEF1-202ENST00000517955 MAPK8IP2Q13387 824 aaPredicted RBP19.11■□□□□ 0.65
ARFGEF1-202ENST00000517955 KIF27Q86VH2 1401 aa19.1■□□□□ 0.65
ARFGEF1-202ENST00000517955 PPP4R3CPQ6ZMV5 832 aa19.1■□□□□ 0.65
ARFGEF1-202ENST00000517955 EEA1Q15075 1411 aa19.08■□□□□ 0.65
ARFGEF1-202ENST00000517955 ABCA5Q8WWZ7 1642 aa19.08■□□□□ 0.65
ARFGEF1-202ENST00000517955 ZNF608Q9ULD9 1512 aaPredicted RBP19.08■□□□□ 0.64
ARFGEF1-202ENST00000517955 TDRD9Q8NDG6 1382 aaKnown RBP19.06■□□□□ 0.64
ARFGEF1-202ENST00000517955 GAPVD1Q14C86 1478 aa19.05■□□□□ 0.64
ARFGEF1-202ENST00000517955 AQRO60306 1485 aaKnown RBP eCLIP19.03■□□□□ 0.64
ARFGEF1-202ENST00000517955 EIF4G3O43432 1585 aaKnown RBP19.02■□□□□ 0.64
ARFGEF1-202ENST00000517955 RUSC2Q8N2Y8 1516 aa19.01■□□□□ 0.63
ARFGEF1-202ENST00000517955 ERICH3Q5RHP9 1530 aa19■□□□□ 0.63
ARFGEF1-202ENST00000517955 GRIN2BQ13224 1484 aa19■□□□□ 0.63
ARFGEF1-202ENST00000517955 IGF1RP08069 1367 aa18.99■□□□□ 0.63
ARFGEF1-202ENST00000517955 DMRT2Q9Y5R5 561 aa18.96■□□□□ 0.63
ARFGEF1-202ENST00000517955 CSRNP3Q8WYN3 585 aa18.95■□□□□ 0.62
ARFGEF1-202ENST00000517955 PBRM1Q86U86 1689 aa18.95■□□□□ 0.62
ARFGEF1-202ENST00000517955 MAGI1Q96QZ7 1491 aaPredicted RBP18.91■□□□□ 0.62
ARFGEF1-202ENST00000517955 CUL7Q14999 1698 aa18.89■□□□□ 0.61
ARFGEF1-202ENST00000517955 PRXQ9BXM0 1461 aa18.88■□□□□ 0.61
ARFGEF1-202ENST00000517955 FHAD1B1AJZ9 1412 aa18.87■□□□□ 0.61
ARFGEF1-202ENST00000517955 CARMIL1Q5VZK9 1371 aa18.87■□□□□ 0.61
ARFGEF1-202ENST00000517955 SNAPC4Q5SXM2 1469 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 659.5 ms