RNA–Protein interactions for RNA: ENST00000517935.1

CDH12P3-201, Transcript of cadherin 12 pseudogene 3, humanhuman

BASIC

Gene CDH12P3, Length 295 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P3-201ENST00000517935 AEBP2Q6ZN18 517 aaPredicted RBP15.67■□□□□ 0.1
CDH12P3-201ENST00000517935 CHIC1Q5VXU3 224 aa15.32■□□□□ 0.04
CDH12P3-201ENST00000517935 PHF23Q9BUL5 403 aaPredicted RBP13.44□□□□□ -0.26
CDH12P3-201ENST00000517935 SENP3Q9H4L4 574 aaPredicted RBP13.36□□□□□ -0.27
CDH12P3-201ENST00000517935 NISCHQ9Y2I1 1504 aa13.34□□□□□ -0.27
CDH12P3-201ENST00000517935 ABCC9O60706 1549 aa13□□□□□ -0.33
CDH12P3-201ENST00000517935 DNAJC5BQ9UF47 199 aa12.91□□□□□ -0.34
CDH12P3-201ENST00000517935 DNAJC5Q9H3Z4 198 aa12.53□□□□□ -0.4
CDH12P3-201ENST00000517935 PLPPR3Q6T4P5 718 aa12.46□□□□□ -0.41
CDH12P3-201ENST00000517935 FOXD1Q16676 465 aa12.37□□□□□ -0.43
CDH12P3-201ENST00000517935 CCDC180Q9P1Z9 1646 aa12.33□□□□□ -0.44
CDH12P3-201ENST00000517935 RB1CC1Q8TDY2 1594 aa12.12□□□□□ -0.47
CDH12P3-201ENST00000517935 PABPN1Q86U42 306 aaKnown RBP eCLIP11.97□□□□□ -0.49
CDH12P3-201ENST00000517935 ADRA2BP18089 450 aa11.88□□□□□ -0.51
CDH12P3-201ENST00000517935 PPP6R1Q9UPN7 881 aa11.87□□□□□ -0.51
CDH12P3-201ENST00000517935 NACADO15069 1562 aa11.87□□□□□ -0.51
CDH12P3-201ENST00000517935 CECR2Q9BXF3 1484 aa11.85□□□□□ -0.51
CDH12P3-201ENST00000517935 BICRAQ9NZM4 1560 aa11.75□□□□□ -0.53
CDH12P3-201ENST00000517935 CC2D2AQ9P2K1 1620 aa11.73□□□□□ -0.53
CDH12P3-201ENST00000517935 UNC13AQ9UPW8 1703 aa11.72□□□□□ -0.53
CDH12P3-201ENST00000517935 PIAS4Q8N2W9 510 aaPredicted RBP11.69□□□□□ -0.54
CDH12P3-201ENST00000517935 SHROOM4Q9ULL8 1493 aa11.65□□□□□ -0.54
CDH12P3-201ENST00000517935 CUX2O14529 1486 aa11.63□□□□□ -0.55
CDH12P3-201ENST00000517935 EIF4G1Q04637 1599 aaKnown RBP11.54□□□□□ -0.56
CDH12P3-201ENST00000517935 TRIM41Q8WV44 630 aa11.53□□□□□ -0.56
CDH12P3-201ENST00000517935 DCAF8L2P0C7V8 631 aa11.52□□□□□ -0.57
CDH12P3-201ENST00000517935 MYO15BQ96JP2 1530 aa11.51□□□□□ -0.57
CDH12P3-201ENST00000517935 MSH5O43196 834 aa11.46□□□□□ -0.57
CDH12P3-201ENST00000517935 ERCC6Q03468 1493 aa11.32□□□□□ -0.6
CDH12P3-201ENST00000517935 SCRIBQ14160 1630 aa11.13□□□□□ -0.63
CDH12P3-201ENST00000517935 DCAF1Q9Y4B6 1507 aa11.04□□□□□ -0.64
CDH12P3-201ENST00000517935 THOC2Q8NI27 1593 aaKnown RBP11.01□□□□□ -0.65
CDH12P3-201ENST00000517935 NCAPD3P42695 1498 aa10.98□□□□□ -0.65
CDH12P3-201ENST00000517935 PPP4R3CPQ6ZMV5 832 aa10.97□□□□□ -0.65
CDH12P3-201ENST00000517935 OSCARQ8IYS5 282 aa10.97□□□□□ -0.65
CDH12P3-201ENST00000517935 SCAF1Q9H7N4 1312 aaKnown RBP10.93□□□□□ -0.66
CDH12P3-201ENST00000517935 NESP48681 1621 aa10.93□□□□□ -0.66
CDH12P3-201ENST00000517935 BAZ1AQ9NRL2 1556 aaPredicted RBP10.89□□□□□ -0.67
CDH12P3-201ENST00000517935 ZCCHC6Q5VYS8 1495 aaKnown RBP10.87□□□□□ -0.67
CDH12P3-201ENST00000517935 LAMC3Q9Y6N6 1575 aa10.83□□□□□ -0.68
CDH12P3-201ENST00000517935 RIMBP3CA6NJZ7 1639 aa10.83□□□□□ -0.68
CDH12P3-201ENST00000517935 RIMBP3BA6NNM3 1639 aa10.83□□□□□ -0.68
CDH12P3-201ENST00000517935 RIMBP3Q9UFD9 1639 aa10.83□□□□□ -0.68
CDH12P3-201ENST00000517935 TRHP20396 242 aaPredicted RBP10.82□□□□□ -0.68
CDH12P3-201ENST00000517935 SMARCA2P51531 1590 aa10.82□□□□□ -0.68
CDH12P3-201ENST00000517935 PDS5BQ9NTI5 1447 aa10.81□□□□□ -0.68
CDH12P3-201ENST00000517935 HMGXB3Q12766 1538 aa10.8□□□□□ -0.68
CDH12P3-201ENST00000517935 ILDR1Q86SU0 546 aaPredicted RBP10.79□□□□□ -0.68
CDH12P3-201ENST00000517935 MAPK8IP2Q13387 824 aaPredicted RBP10.78□□□□□ -0.68
CDH12P3-201ENST00000517935 ATAD2BQ9ULI0 1458 aa10.78□□□□□ -0.68
CDH12P3-201ENST00000517935 KIF21AQ7Z4S6 1674 aa10.76□□□□□ -0.69
CDH12P3-201ENST00000517935 ARHGEF11O15085 1522 aa10.74□□□□□ -0.69
CDH12P3-201ENST00000517935 WDR62O43379 1518 aa10.73□□□□□ -0.69
CDH12P3-201ENST00000517935 MRC2Q9UBG0 1479 aa10.72□□□□□ -0.69
CDH12P3-201ENST00000517935 NCBP3Q53F19 620 aaKnown RBP10.71□□□□□ -0.69
CDH12P3-201ENST00000517935 CYB5RLQ6IPT4 315 aa10.7□□□□□ -0.7
CDH12P3-201ENST00000517935 CNKSR2Q8WXI2 1034 aa10.67□□□□□ -0.7
CDH12P3-201ENST00000517935 KCNA4P22459 653 aa10.65□□□□□ -0.7
CDH12P3-201ENST00000517935 DMRT2Q9Y5R5 561 aa10.65□□□□□ -0.7
CDH12P3-201ENST00000517935 BAZ1BQ9UIG0 1483 aaKnown RBP10.62□□□□□ -0.71
CDH12P3-201ENST00000517935 CADPSQ9ULU8 1353 aa10.59□□□□□ -0.71
CDH12P3-201ENST00000517935 ARAP1Q96P48 1450 aa10.56□□□□□ -0.72
CDH12P3-201ENST00000517935 SMARCA4P51532 1647 aa10.55□□□□□ -0.72
CDH12P3-201ENST00000517935 PEG3Q9GZU2 1588 aa10.52□□□□□ -0.73
CDH12P3-201ENST00000517935 CEP164Q9UPV0 1460 aa10.51□□□□□ -0.73
CDH12P3-201ENST00000517935 RSF1Q96T23 1441 aaPredicted RBP10.5□□□□□ -0.73
CDH12P3-201ENST00000517935 NPM3O75607 178 aaKnown RBP10.5□□□□□ -0.73
CDH12P3-201ENST00000517935 RNF216Q9NWF9 866 aaPredicted RBP10.46□□□□□ -0.73
CDH12P3-201ENST00000517935 POTEDQ86YR6 584 aa10.45□□□□□ -0.74
CDH12P3-201ENST00000517935 FANCD2Q9BXW9 1451 aa10.42□□□□□ -0.74
CDH12P3-201ENST00000517935 HOXD11P31277 338 aaPredicted RBP10.41□□□□□ -0.74
CDH12P3-201ENST00000517935 URB2Q14146 1524 aaKnown RBP10.37□□□□□ -0.75
CDH12P3-201ENST00000517935 IFT140Q96RY7 1462 aa10.36□□□□□ -0.75
CDH12P3-201ENST00000517935 ZNF608Q9ULD9 1512 aaPredicted RBP10.36□□□□□ -0.75
CDH12P3-201ENST00000517935 KDM4FA0A1W2PPD8 638 aa10.31□□□□□ -0.76
CDH12P3-201ENST00000517935 CHD1O14646 1710 aa10.3□□□□□ -0.76
CDH12P3-201ENST00000517935 CFTRP13569 1480 aa10.3□□□□□ -0.76
CDH12P3-201ENST00000517935 FBXO41Q8TF61 875 aa10.29□□□□□ -0.76
CDH12P3-201ENST00000517935 EIF4G3O43432 1585 aaKnown RBP10.26□□□□□ -0.77
CDH12P3-201ENST00000517935 ERCC6L2Q5T890 1561 aa10.26□□□□□ -0.77
CDH12P3-201ENST00000517935 FBLN2P98095 1184 aa10.25□□□□□ -0.77
CDH12P3-201ENST00000517935 DCAF8L1A6NGE4 600 aa10.24□□□□□ -0.77
CDH12P3-201ENST00000517935 CLASP1Q7Z460 1538 aa10.23□□□□□ -0.77
CDH12P3-201ENST00000517935 LMTK3Q96Q04 1460 aa10.22□□□□□ -0.77
CDH12P3-201ENST00000517935 MROH2BQ7Z745 1585 aa10.22□□□□□ -0.77
CDH12P3-201ENST00000517935 SOCS7O14512 581 aa10.21□□□□□ -0.77
CDH12P3-201ENST00000517935 GAPVD1Q14C86 1478 aa10.19□□□□□ -0.78
CDH12P3-201ENST00000517935 AQRO60306 1485 aaKnown RBP eCLIP10.17□□□□□ -0.78
CDH12P3-201ENST00000517935 SLC4A1APQ9BWU0 796 aaKnown RBP10.17□□□□□ -0.78
CDH12P3-201ENST00000517935 SYNJ1O43426 1573 aa10.16□□□□□ -0.78
CDH12P3-201ENST00000517935 ABCC8Q09428 1581 aa10.15□□□□□ -0.78
CDH12P3-201ENST00000517935 TOPBP1Q92547 1522 aa10.14□□□□□ -0.79
CDH12P3-201ENST00000517935 HECW2Q9P2P5 1572 aa10.14□□□□□ -0.79
CDH12P3-201ENST00000517935 KIF13AQ9H1H9 1805 aa10.11□□□□□ -0.79
CDH12P3-201ENST00000517935 TARBP1Q13395 1621 aaKnown RBP10.11□□□□□ -0.79
CDH12P3-201ENST00000517935 CHMP7Q8WUX9 453 aaPredicted RBP10.1□□□□□ -0.79
CDH12P3-201ENST00000517935 MAGI1Q96QZ7 1491 aaPredicted RBP10.05□□□□□ -0.8
CDH12P3-201ENST00000517935 PRDM2Q13029 1718 aa10.05□□□□□ -0.8
CDH12P3-201ENST00000517935 KDM6BO15054 1643 aa10.05□□□□□ -0.8
CDH12P3-201ENST00000517935 ILDR2Q71H61 639 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms