RNA–Protein interactions for RNA: ENST00000515747.1

GNPDA1-213, Transcript of glucosamine-6-phosphate deaminase 1, humanhuman

TSL 2

Gene GNPDA1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNPDA1-213ENST00000515747 NISCHQ9Y2I1 1504 aa19.35■□□□□ 0.69
GNPDA1-213ENST00000515747 DNAJC5BQ9UF47 199 aa17.08■□□□□ 0.32
GNPDA1-213ENST00000515747 CCDC180Q9P1Z9 1646 aa17.03■□□□□ 0.32
GNPDA1-213ENST00000515747 DNAJC5Q9H3Z4 198 aa16.99■□□□□ 0.31
GNPDA1-213ENST00000515747 ABCC9O60706 1549 aa16.8■□□□□ 0.28
GNPDA1-213ENST00000515747 DCAF8L2P0C7V8 631 aa16.24■□□□□ 0.19
GNPDA1-213ENST00000515747 ZCCHC6Q5VYS8 1495 aaKnown RBP16.15■□□□□ 0.18
GNPDA1-213ENST00000515747 DCAF1Q9Y4B6 1507 aa16.04■□□□□ 0.16
GNPDA1-213ENST00000515747 NACADO15069 1562 aa16■□□□□ 0.15
GNPDA1-213ENST00000515747 MYO15BQ96JP2 1530 aa15.99■□□□□ 0.15
GNPDA1-213ENST00000515747 RB1CC1Q8TDY2 1594 aa15.94■□□□□ 0.14
GNPDA1-213ENST00000515747 TRIM41Q8WV44 630 aa15.65■□□□□ 0.1
GNPDA1-213ENST00000515747 SCRIBQ14160 1630 aa15.57■□□□□ 0.08
GNPDA1-213ENST00000515747 SHROOM4Q9ULL8 1493 aa15.53■□□□□ 0.08
GNPDA1-213ENST00000515747 PABPN1Q86U42 306 aaKnown RBP eCLIP15.46■□□□□ 0.07
GNPDA1-213ENST00000515747 UNC13AQ9UPW8 1703 aa15.4■□□□□ 0.06
GNPDA1-213ENST00000515747 AEBP2Q6ZN18 517 aaPredicted RBP15.35■□□□□ 0.05
GNPDA1-213ENST00000515747 CECR2Q9BXF3 1484 aa15.34■□□□□ 0.05
GNPDA1-213ENST00000515747 BICRAQ9NZM4 1560 aa15.32■□□□□ 0.04
GNPDA1-213ENST00000515747 CUX2O14529 1486 aa15.18■□□□□ 0.02
GNPDA1-213ENST00000515747 CC2D2AQ9P2K1 1620 aa15.03■□□□□ -0
GNPDA1-213ENST00000515747 BAZ1AQ9NRL2 1556 aaPredicted RBP15□□□□□ -0.01
GNPDA1-213ENST00000515747 EIF4G1Q04637 1599 aaKnown RBP14.96□□□□□ -0.01
GNPDA1-213ENST00000515747 SMARCA4P51532 1647 aa14.92□□□□□ -0.02
GNPDA1-213ENST00000515747 MROH2BQ7Z745 1585 aa14.89□□□□□ -0.03
GNPDA1-213ENST00000515747 RSF1Q96T23 1441 aaPredicted RBP14.88□□□□□ -0.03
GNPDA1-213ENST00000515747 SUPT5HO00267 1087 aaKnown RBP14.87□□□□□ -0.03
GNPDA1-213ENST00000515747 ILDR1Q86SU0 546 aaPredicted RBP14.84□□□□□ -0.03
GNPDA1-213ENST00000515747 SMARCA2P51531 1590 aa14.83□□□□□ -0.04
GNPDA1-213ENST00000515747 ATAD2BQ9ULI0 1458 aa14.79□□□□□ -0.04
GNPDA1-213ENST00000515747 NCAPD3P42695 1498 aa14.76□□□□□ -0.05
GNPDA1-213ENST00000515747 PEG3Q9GZU2 1588 aa14.76□□□□□ -0.05
GNPDA1-213ENST00000515747 ERCC6Q03468 1493 aa14.75□□□□□ -0.05
GNPDA1-213ENST00000515747 BAZ1BQ9UIG0 1483 aaKnown RBP14.73□□□□□ -0.05
GNPDA1-213ENST00000515747 WIZO95785 1651 aa14.72□□□□□ -0.05
GNPDA1-213ENST00000515747 HMGXB3Q12766 1538 aa14.68□□□□□ -0.06
GNPDA1-213ENST00000515747 TOP2AP11388 1531 aaKnown RBP14.62□□□□□ -0.07
GNPDA1-213ENST00000515747 TRHP20396 242 aaPredicted RBP14.54□□□□□ -0.08
GNPDA1-213ENST00000515747 CCDC88BA6NC98 1476 aa14.49□□□□□ -0.09
GNPDA1-213ENST00000515747 CADPSQ9ULU8 1353 aa14.38□□□□□ -0.11
GNPDA1-213ENST00000515747 OSCARQ8IYS5 282 aa14.38□□□□□ -0.11
GNPDA1-213ENST00000515747 CFTRP13569 1480 aa14.31□□□□□ -0.12
GNPDA1-213ENST00000515747 LAMC3Q9Y6N6 1575 aa14.31□□□□□ -0.12
GNPDA1-213ENST00000515747 PDS5BQ9NTI5 1447 aa14.29□□□□□ -0.12
GNPDA1-213ENST00000515747 NESP48681 1621 aa14.24□□□□□ -0.13
GNPDA1-213ENST00000515747 FANCD2Q9BXW9 1451 aa14.18□□□□□ -0.14
GNPDA1-213ENST00000515747 CEP164Q9UPV0 1460 aa14.15□□□□□ -0.14
GNPDA1-213ENST00000515747 PRDM2Q13029 1718 aa14.13□□□□□ -0.15
GNPDA1-213ENST00000515747 CYB5RLQ6IPT4 315 aa14.11□□□□□ -0.15
GNPDA1-213ENST00000515747 ABCC8Q09428 1581 aa14.09□□□□□ -0.15
GNPDA1-213ENST00000515747 RIMBP3CA6NJZ7 1639 aa14.09□□□□□ -0.15
GNPDA1-213ENST00000515747 RIMBP3BA6NNM3 1639 aa14.09□□□□□ -0.15
GNPDA1-213ENST00000515747 RIMBP3Q9UFD9 1639 aa14.09□□□□□ -0.15
GNPDA1-213ENST00000515747 WRNQ14191 1432 aaPredicted RBP eCLIP14.07□□□□□ -0.16
GNPDA1-213ENST00000515747 MRC2Q9UBG0 1479 aa14.05□□□□□ -0.16
GNPDA1-213ENST00000515747 SOCS7O14512 581 aa14.04□□□□□ -0.16
GNPDA1-213ENST00000515747 KIF21AQ7Z4S6 1674 aa14.04□□□□□ -0.16
GNPDA1-213ENST00000515747 CHIC1Q5VXU3 224 aa14.03□□□□□ -0.16
GNPDA1-213ENST00000515747 THOC2Q8NI27 1593 aaKnown RBP14.02□□□□□ -0.16
GNPDA1-213ENST00000515747 LMTK3Q96Q04 1460 aa14.02□□□□□ -0.16
GNPDA1-213ENST00000515747 DNMBPQ6XZF7 1577 aa13.98□□□□□ -0.17
GNPDA1-213ENST00000515747 URB2Q14146 1524 aaKnown RBP13.96□□□□□ -0.17
GNPDA1-213ENST00000515747 TOPBP1Q92547 1522 aa13.96□□□□□ -0.17
GNPDA1-213ENST00000515747 CUX1P39880 1505 aa13.95□□□□□ -0.18
GNPDA1-213ENST00000515747 ARHGEF11O15085 1522 aa13.94□□□□□ -0.18
GNPDA1-213ENST00000515747 WDR62O43379 1518 aa13.94□□□□□ -0.18
GNPDA1-213ENST00000515747 TOP2BQ02880 1626 aa13.93□□□□□ -0.18
GNPDA1-213ENST00000515747 FBXO41Q8TF61 875 aa13.92□□□□□ -0.18
GNPDA1-213ENST00000515747 SOGA1O94964 1423 aa13.9□□□□□ -0.18
GNPDA1-213ENST00000515747 SYNJ1O43426 1573 aa13.9□□□□□ -0.18
GNPDA1-213ENST00000515747 BIVM-ERCC5R4GMW8 1640 aa13.9□□□□□ -0.19
GNPDA1-213ENST00000515747 FGD5Q6ZNL6 1462 aa13.88□□□□□ -0.19
GNPDA1-213ENST00000515747 POLA1P09884 1462 aaPredicted RBP13.86□□□□□ -0.19
GNPDA1-213ENST00000515747 IFT140Q96RY7 1462 aa13.85□□□□□ -0.19
GNPDA1-213ENST00000515747 RAD54L2Q9Y4B4 1467 aa13.8□□□□□ -0.2
GNPDA1-213ENST00000515747 KIF27Q86VH2 1401 aa13.78□□□□□ -0.2
GNPDA1-213ENST00000515747 ABCA10Q8WWZ4 1543 aa13.78□□□□□ -0.2
GNPDA1-213ENST00000515747 EEA1Q15075 1411 aa13.76□□□□□ -0.21
GNPDA1-213ENST00000515747 TDRD9Q8NDG6 1382 aaKnown RBP13.75□□□□□ -0.21
GNPDA1-213ENST00000515747 TARBP1Q13395 1621 aaKnown RBP13.74□□□□□ -0.21
GNPDA1-213ENST00000515747 FAM9AQ8IZU1 332 aaPredicted RBP13.73□□□□□ -0.21
GNPDA1-213ENST00000515747 WDR97A6NE52 1622 aa13.72□□□□□ -0.21
GNPDA1-213ENST00000515747 CSRNP3Q8WYN3 585 aa13.72□□□□□ -0.21
GNPDA1-213ENST00000515747 GAPVD1Q14C86 1478 aa13.72□□□□□ -0.21
GNPDA1-213ENST00000515747 AQRO60306 1485 aaKnown RBP eCLIP13.7□□□□□ -0.22
GNPDA1-213ENST00000515747 ILDR2Q71H61 639 aa13.68□□□□□ -0.22
GNPDA1-213ENST00000515747 ZNF608Q9ULD9 1512 aaPredicted RBP13.68□□□□□ -0.22
GNPDA1-213ENST00000515747 GRIN2BQ13224 1484 aa13.67□□□□□ -0.22
GNPDA1-213ENST00000515747 IGF1RP08069 1367 aa13.66□□□□□ -0.22
GNPDA1-213ENST00000515747 ARAP1Q96P48 1450 aa13.66□□□□□ -0.22
GNPDA1-213ENST00000515747 ERCC6L2Q5T890 1561 aa13.66□□□□□ -0.22
GNPDA1-213ENST00000515747 ERICH3Q5RHP9 1530 aa13.64□□□□□ -0.23
GNPDA1-213ENST00000515747 DISP3Q9P2K9 1392 aa13.63□□□□□ -0.23
GNPDA1-213ENST00000515747 RUSC2Q8N2Y8 1516 aa13.63□□□□□ -0.23
GNPDA1-213ENST00000515747 ABCA5Q8WWZ7 1642 aa13.62□□□□□ -0.23
GNPDA1-213ENST00000515747 KDM4FA0A1W2PPD8 638 aa13.62□□□□□ -0.23
GNPDA1-213ENST00000515747 CHMP7Q8WUX9 453 aaPredicted RBP13.62□□□□□ -0.23
GNPDA1-213ENST00000515747 EIF4G3O43432 1585 aaKnown RBP13.62□□□□□ -0.23
GNPDA1-213ENST00000515747 CARMIL1Q5VZK9 1371 aa13.61□□□□□ -0.23
GNPDA1-213ENST00000515747 FBLN2P98095 1184 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 132.9 ms