RNA–Protein interactions for RNA: ENST00000515078.5

FAM149A-218, Transcript of family with sequence similarity 149 member A, humanhuman

TSL 2

Gene FAM149A, Length 1,962 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM149A-218ENST00000515078 NISCHQ9Y2I1 1504 aa24.3■■□□□ 1.48
FAM149A-218ENST00000515078 CCDC180Q9P1Z9 1646 aa21.14■□□□□ 0.98
FAM149A-218ENST00000515078 ZCCHC6Q5VYS8 1495 aaKnown RBP20.41■□□□□ 0.86
FAM149A-218ENST00000515078 DCAF1Q9Y4B6 1507 aa20.08■□□□□ 0.8
FAM149A-218ENST00000515078 DCAF8L2P0C7V8 631 aa20.06■□□□□ 0.8
FAM149A-218ENST00000515078 ABCC9O60706 1549 aa20.02■□□□□ 0.8
FAM149A-218ENST00000515078 SHROOM4Q9ULL8 1493 aa19.84■□□□□ 0.77
FAM149A-218ENST00000515078 MYO15BQ96JP2 1530 aa19.84■□□□□ 0.77
FAM149A-218ENST00000515078 NACADO15069 1562 aa19.7■□□□□ 0.74
FAM149A-218ENST00000515078 RB1CC1Q8TDY2 1594 aa19.52■□□□□ 0.72
FAM149A-218ENST00000515078 SCRIBQ14160 1630 aa19.47■□□□□ 0.71
FAM149A-218ENST00000515078 UNC13AQ9UPW8 1703 aa19.16■□□□□ 0.66
FAM149A-218ENST00000515078 SUPT5HO00267 1087 aaKnown RBP19.09■□□□□ 0.65
FAM149A-218ENST00000515078 BICRAQ9NZM4 1560 aa18.98■□□□□ 0.63
FAM149A-218ENST00000515078 PABPN1Q86U42 306 aaKnown RBP eCLIP18.92■□□□□ 0.62
FAM149A-218ENST00000515078 CECR2Q9BXF3 1484 aa18.91■□□□□ 0.62
FAM149A-218ENST00000515078 RSF1Q96T23 1441 aaPredicted RBP18.87■□□□□ 0.61
FAM149A-218ENST00000515078 MROH2BQ7Z745 1585 aa18.79■□□□□ 0.6
FAM149A-218ENST00000515078 PELP1Q8IZL8 1130 aaKnown RBP18.79■□□□□ 0.6
FAM149A-218ENST00000515078 HRCP23327 699 aa18.78■□□□□ 0.6
FAM149A-218ENST00000515078 BAZ1AQ9NRL2 1556 aaPredicted RBP18.74■□□□□ 0.59
FAM149A-218ENST00000515078 SMARCA4P51532 1647 aa18.67■□□□□ 0.58
FAM149A-218ENST00000515078 WIZO95785 1651 aa18.62■□□□□ 0.57
FAM149A-218ENST00000515078 PEG3Q9GZU2 1588 aa18.44■□□□□ 0.54
FAM149A-218ENST00000515078 TOP2AP11388 1531 aaKnown RBP18.41■□□□□ 0.54
FAM149A-218ENST00000515078 EIF4G1Q04637 1599 aaKnown RBP18.39■□□□□ 0.53
FAM149A-218ENST00000515078 ATAD2BQ9ULI0 1458 aa18.37■□□□□ 0.53
FAM149A-218ENST00000515078 SMARCA2P51531 1590 aa18.33■□□□□ 0.53
FAM149A-218ENST00000515078 CHIC1Q5VXU3 224 aa18.3■□□□□ 0.52
FAM149A-218ENST00000515078 CCDC88BA6NC98 1476 aa18.25■□□□□ 0.51
FAM149A-218ENST00000515078 BAZ1BQ9UIG0 1483 aaKnown RBP18.25■□□□□ 0.51
FAM149A-218ENST00000515078 MYT1Q01538 1121 aa18.24■□□□□ 0.51
FAM149A-218ENST00000515078 NCAPD3P42695 1498 aa18.21■□□□□ 0.51
FAM149A-218ENST00000515078 HMGXB3Q12766 1538 aa18.16■□□□□ 0.5
FAM149A-218ENST00000515078 CC2D2AQ9P2K1 1620 aa18.11■□□□□ 0.49
FAM149A-218ENST00000515078 PPARGC1BQ86YN6 1023 aaKnown RBP18.05■□□□□ 0.48
FAM149A-218ENST00000515078 PCGF6Q9BYE7 350 aa17.97■□□□□ 0.47
FAM149A-218ENST00000515078 DNAJC5BQ9UF47 199 aa17.94■□□□□ 0.46
FAM149A-218ENST00000515078 TRIM41Q8WV44 630 aa17.93■□□□□ 0.46
FAM149A-218ENST00000515078 ABCC8Q09428 1581 aa17.86■□□□□ 0.45
FAM149A-218ENST00000515078 SCAF1Q9H7N4 1312 aaKnown RBP17.82■□□□□ 0.44
FAM149A-218ENST00000515078 CFTRP13569 1480 aa17.81■□□□□ 0.44
FAM149A-218ENST00000515078 CADPSQ9ULU8 1353 aa17.75■□□□□ 0.43
FAM149A-218ENST00000515078 WRNQ14191 1432 aaPredicted RBP eCLIP17.74■□□□□ 0.43
FAM149A-218ENST00000515078 SYNJ1O43426 1573 aa17.67■□□□□ 0.42
FAM149A-218ENST00000515078 PRDM2Q13029 1718 aa17.67■□□□□ 0.42
FAM149A-218ENST00000515078 ZEB1P37275 1124 aaPredicted RBP17.66■□□□□ 0.42
FAM149A-218ENST00000515078 FAM9AQ8IZU1 332 aaPredicted RBP17.62■□□□□ 0.41
FAM149A-218ENST00000515078 LOC105371045A0A1W2PR82 267 aa17.61■□□□□ 0.41
FAM149A-218ENST00000515078 NESP48681 1621 aa17.6■□□□□ 0.41
FAM149A-218ENST00000515078 TOP2BQ02880 1626 aa17.59■□□□□ 0.41
FAM149A-218ENST00000515078 TRIM26Q12899 539 aaPredicted RBP17.57■□□□□ 0.4
FAM149A-218ENST00000515078 LAMC3Q9Y6N6 1575 aa17.56■□□□□ 0.4
FAM149A-218ENST00000515078 BIVM-ERCC5R4GMW8 1640 aa17.56■□□□□ 0.4
FAM149A-218ENST00000515078 CUX1P39880 1505 aa17.56■□□□□ 0.4
FAM149A-218ENST00000515078 SOGA1O94964 1423 aa17.55■□□□□ 0.4
FAM149A-218ENST00000515078 FANCD2Q9BXW9 1451 aa17.54■□□□□ 0.4
FAM149A-218ENST00000515078 RUSC2Q8N2Y8 1516 aa17.49■□□□□ 0.39
FAM149A-218ENST00000515078 EEA1Q15075 1411 aa17.47■□□□□ 0.39
FAM149A-218ENST00000515078 PDS5BQ9NTI5 1447 aa17.43■□□□□ 0.38
FAM149A-218ENST00000515078 CEP164Q9UPV0 1460 aa17.42■□□□□ 0.38
FAM149A-218ENST00000515078 CSRNP3Q8WYN3 585 aa17.4■□□□□ 0.38
FAM149A-218ENST00000515078 EHMT2Q96KQ7 1210 aa17.38■□□□□ 0.37
FAM149A-218ENST00000515078 ACIN1Q9UKV3 1341 aaKnown RBP17.38■□□□□ 0.37
FAM149A-218ENST00000515078 DNMBPQ6XZF7 1577 aa17.37■□□□□ 0.37
FAM149A-218ENST00000515078 TOPBP1Q92547 1522 aa17.36■□□□□ 0.37
FAM149A-218ENST00000515078 KIF21AQ7Z4S6 1674 aa17.36■□□□□ 0.37
FAM149A-218ENST00000515078 FGD5Q6ZNL6 1462 aa17.35■□□□□ 0.37
FAM149A-218ENST00000515078 URB2Q14146 1524 aaKnown RBP17.34■□□□□ 0.37
FAM149A-218ENST00000515078 TTBK1Q5TCY1 1321 aaPredicted RBP17.29■□□□□ 0.36
FAM149A-218ENST00000515078 POLA1P09884 1462 aaPredicted RBP17.28■□□□□ 0.36
FAM149A-218ENST00000515078 KIF27Q86VH2 1401 aa17.28■□□□□ 0.36
FAM149A-218ENST00000515078 KIF21BO75037 1637 aa17.25■□□□□ 0.35
FAM149A-218ENST00000515078 CUX2O14529 1486 aa17.24■□□□□ 0.35
FAM149A-218ENST00000515078 GOLGA3Q08378 1498 aa17.23■□□□□ 0.35
FAM149A-218ENST00000515078 RAD54L2Q9Y4B4 1467 aa17.23■□□□□ 0.35
FAM149A-218ENST00000515078 MRC2Q9UBG0 1479 aa17.21■□□□□ 0.35
FAM149A-218ENST00000515078 ABCA10Q8WWZ4 1543 aa17.2■□□□□ 0.34
FAM149A-218ENST00000515078 TNIKQ9UKE5 1360 aa17.2■□□□□ 0.34
FAM149A-218ENST00000515078 NEUROD1Q13562 356 aa17.2■□□□□ 0.34
FAM149A-218ENST00000515078 PRXQ9BXM0 1461 aa17.19■□□□□ 0.34
FAM149A-218ENST00000515078 RAPGEF2Q9Y4G8 1499 aa17.18■□□□□ 0.34
FAM149A-218ENST00000515078 IGF1RP08069 1367 aa17.17■□□□□ 0.34
FAM149A-218ENST00000515078 UBTFP17480 764 aaKnown RBP17.17■□□□□ 0.34
FAM149A-218ENST00000515078 ERCC6Q03468 1493 aa17.14■□□□□ 0.33
FAM149A-218ENST00000515078 ERICH3Q5RHP9 1530 aa17.13■□□□□ 0.33
FAM149A-218ENST00000515078 WDR97A6NE52 1622 aa17.13■□□□□ 0.33
FAM149A-218ENST00000515078 WDR62O43379 1518 aa17.13■□□□□ 0.33
FAM149A-218ENST00000515078 CEP162Q5TB80 1403 aa17.11■□□□□ 0.33
FAM149A-218ENST00000515078 CENPBP07199 599 aaPredicted RBP17.11■□□□□ 0.33
FAM149A-218ENST00000515078 GTF3C3Q9Y5Q9 886 aa17.11■□□□□ 0.33
FAM149A-218ENST00000515078 TARBP1Q13395 1621 aaKnown RBP17.11■□□□□ 0.33
FAM149A-218ENST00000515078 THOC2Q8NI27 1593 aaKnown RBP17.07■□□□□ 0.32
FAM149A-218ENST00000515078 TDRD9Q8NDG6 1382 aaKnown RBP17.07■□□□□ 0.32
FAM149A-218ENST00000515078 CARMIL1Q5VZK9 1371 aa17.05■□□□□ 0.32
FAM149A-218ENST00000515078 ABCA5Q8WWZ7 1642 aa17.05■□□□□ 0.32
FAM149A-218ENST00000515078 GAPVD1Q14C86 1478 aa17.03■□□□□ 0.32
FAM149A-218ENST00000515078 IFT140Q96RY7 1462 aa17■□□□□ 0.31
FAM149A-218ENST00000515078 CUL7Q14999 1698 aa16.98■□□□□ 0.31
FAM149A-218ENST00000515078 CLIP1P30622 1438 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms