RNA–Protein interactions for RNA: ENST00000514415.1

HOXC10-204, Transcript of homeobox C10, humanhuman

TSL 3

Gene HOXC10, Length 550 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC10-204ENST00000514415 NISCHQ9Y2I1 1504 aa26.27■■□□□ 1.8
HOXC10-204ENST00000514415 CCDC180Q9P1Z9 1646 aa22.79■■□□□ 1.24
HOXC10-204ENST00000514415 ZCCHC6Q5VYS8 1495 aaKnown RBP22.22■■□□□ 1.15
HOXC10-204ENST00000514415 DCAF1Q9Y4B6 1507 aa21.87■■□□□ 1.09
HOXC10-204ENST00000514415 SHROOM4Q9ULL8 1493 aa21.62■■□□□ 1.05
HOXC10-204ENST00000514415 MYO15BQ96JP2 1530 aa21.37■■□□□ 1.01
HOXC10-204ENST00000514415 SUPT5HO00267 1087 aaKnown RBP21.17■□□□□ 0.98
HOXC10-204ENST00000514415 DCAF8L2P0C7V8 631 aa21.13■□□□□ 0.97
HOXC10-204ENST00000514415 ABCC9O60706 1549 aa20.98■□□□□ 0.95
HOXC10-204ENST00000514415 NACADO15069 1562 aa20.96■□□□□ 0.95
HOXC10-204ENST00000514415 SCRIBQ14160 1630 aa20.79■□□□□ 0.92
HOXC10-204ENST00000514415 CHIC1Q5VXU3 224 aa20.76■□□□□ 0.91
HOXC10-204ENST00000514415 RB1CC1Q8TDY2 1594 aa20.59■□□□□ 0.89
HOXC10-204ENST00000514415 RSF1Q96T23 1441 aaPredicted RBP20.57■□□□□ 0.88
HOXC10-204ENST00000514415 AEBP2Q6ZN18 517 aaPredicted RBP20.38■□□□□ 0.85
HOXC10-204ENST00000514415 UNC13AQ9UPW8 1703 aa20.3■□□□□ 0.84
HOXC10-204ENST00000514415 BAZ1AQ9NRL2 1556 aaPredicted RBP20.28■□□□□ 0.84
HOXC10-204ENST00000514415 MROH2BQ7Z745 1585 aa20.25■□□□□ 0.83
HOXC10-204ENST00000514415 CECR2Q9BXF3 1484 aa20.22■□□□□ 0.83
HOXC10-204ENST00000514415 WIZO95785 1651 aa20.18■□□□□ 0.82
HOXC10-204ENST00000514415 SMARCA4P51532 1647 aa20.09■□□□□ 0.81
HOXC10-204ENST00000514415 TOP2AP11388 1531 aaKnown RBP20.04■□□□□ 0.8
HOXC10-204ENST00000514415 EIF4G1Q04637 1599 aaKnown RBP20.04■□□□□ 0.8
HOXC10-204ENST00000514415 TRIM41Q8WV44 630 aa19.96■□□□□ 0.79
HOXC10-204ENST00000514415 BICRAQ9NZM4 1560 aa19.9■□□□□ 0.78
HOXC10-204ENST00000514415 PEG3Q9GZU2 1588 aa19.89■□□□□ 0.77
HOXC10-204ENST00000514415 HRCP23327 699 aa19.87■□□□□ 0.77
HOXC10-204ENST00000514415 LOC105371045A0A1W2PR82 267 aa19.86■□□□□ 0.77
HOXC10-204ENST00000514415 SMARCA2P51531 1590 aa19.86■□□□□ 0.77
HOXC10-204ENST00000514415 CCDC88BA6NC98 1476 aa19.75■□□□□ 0.75
HOXC10-204ENST00000514415 PCGF6Q9BYE7 350 aa19.73■□□□□ 0.75
HOXC10-204ENST00000514415 TRIM26Q12899 539 aaPredicted RBP19.72■□□□□ 0.75
HOXC10-204ENST00000514415 EEA1Q15075 1411 aa19.6■□□□□ 0.73
HOXC10-204ENST00000514415 ABCC8Q09428 1581 aa19.52■□□□□ 0.71
HOXC10-204ENST00000514415 ATAD2BQ9ULI0 1458 aa19.5■□□□□ 0.71
HOXC10-204ENST00000514415 FAM9AQ8IZU1 332 aaPredicted RBP19.46■□□□□ 0.71
HOXC10-204ENST00000514415 BAZ1BQ9UIG0 1483 aaKnown RBP19.43■□□□□ 0.7
HOXC10-204ENST00000514415 ZEB1P37275 1124 aaPredicted RBP19.43■□□□□ 0.7
HOXC10-204ENST00000514415 PABPN1Q86U42 306 aaKnown RBP eCLIP19.4■□□□□ 0.7
HOXC10-204ENST00000514415 WRNQ14191 1432 aaPredicted RBP eCLIP19.38■□□□□ 0.69
HOXC10-204ENST00000514415 HMGXB3Q12766 1538 aa19.37■□□□□ 0.69
HOXC10-204ENST00000514415 TNIKQ9UKE5 1360 aa19.34■□□□□ 0.69
HOXC10-204ENST00000514415 KIF21BO75037 1637 aa19.32■□□□□ 0.68
HOXC10-204ENST00000514415 SYNJ1O43426 1573 aa19.27■□□□□ 0.68
HOXC10-204ENST00000514415 BIVM-ERCC5R4GMW8 1640 aa19.27■□□□□ 0.68
HOXC10-204ENST00000514415 GOLGA3Q08378 1498 aa19.27■□□□□ 0.67
HOXC10-204ENST00000514415 NCAPD3P42695 1498 aa19.26■□□□□ 0.67
HOXC10-204ENST00000514415 PRDM2Q13029 1718 aa19.25■□□□□ 0.67
HOXC10-204ENST00000514415 SOGA1O94964 1423 aa19.25■□□□□ 0.67
HOXC10-204ENST00000514415 CSRNP3Q8WYN3 585 aa19.24■□□□□ 0.67
HOXC10-204ENST00000514415 TOP2BQ02880 1626 aa19.23■□□□□ 0.67
HOXC10-204ENST00000514415 CEP162Q5TB80 1403 aa19.21■□□□□ 0.67
HOXC10-204ENST00000514415 CEP164Q9UPV0 1460 aa19.21■□□□□ 0.67
HOXC10-204ENST00000514415 RUSC2Q8N2Y8 1516 aa19.14■□□□□ 0.65
HOXC10-204ENST00000514415 PPARGC1BQ86YN6 1023 aaKnown RBP19.07■□□□□ 0.64
HOXC10-204ENST00000514415 ERICH3Q5RHP9 1530 aa19.05■□□□□ 0.64
HOXC10-204ENST00000514415 EHMT2Q96KQ7 1210 aa19.02■□□□□ 0.64
HOXC10-204ENST00000514415 CFTRP13569 1480 aa19■□□□□ 0.63
HOXC10-204ENST00000514415 UBTFP17480 764 aaKnown RBP18.97■□□□□ 0.63
HOXC10-204ENST00000514415 CUX1P39880 1505 aa18.91■□□□□ 0.62
HOXC10-204ENST00000514415 CLIP1P30622 1438 aa18.91■□□□□ 0.62
HOXC10-204ENST00000514415 VPS8Q8N3P4 1428 aa18.9■□□□□ 0.62
HOXC10-204ENST00000514415 PRXQ9BXM0 1461 aa18.9■□□□□ 0.62
HOXC10-204ENST00000514415 RAPGEF2Q9Y4G8 1499 aa18.87■□□□□ 0.61
HOXC10-204ENST00000514415 KIF27Q86VH2 1401 aa18.83■□□□□ 0.61
HOXC10-204ENST00000514415 CC2D2AQ9P2K1 1620 aa18.76■□□□□ 0.59
HOXC10-204ENST00000514415 CADPSQ9ULU8 1353 aa18.75■□□□□ 0.59
HOXC10-204ENST00000514415 CCER1Q8TC90 406 aaPredicted RBP18.72■□□□□ 0.59
HOXC10-204ENST00000514415 APLP2Q06481 763 aa18.67■□□□□ 0.58
HOXC10-204ENST00000514415 ARAP1Q96P48 1450 aa18.66■□□□□ 0.58
HOXC10-204ENST00000514415 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.64■□□□□ 0.57
HOXC10-204ENST00000514415 DNMBPQ6XZF7 1577 aa18.62■□□□□ 0.57
HOXC10-204ENST00000514415 MAP3K1Q13233 1512 aa18.6■□□□□ 0.57
HOXC10-204ENST00000514415 FGD5Q6ZNL6 1462 aa18.58■□□□□ 0.57
HOXC10-204ENST00000514415 LAMC3Q9Y6N6 1575 aa18.57■□□□□ 0.56
HOXC10-204ENST00000514415 CUX2O14529 1486 aa18.56■□□□□ 0.56
HOXC10-204ENST00000514415 CUL7Q14999 1698 aa18.55■□□□□ 0.56
HOXC10-204ENST00000514415 FANCD2Q9BXW9 1451 aa18.55■□□□□ 0.56
HOXC10-204ENST00000514415 IGF1RP08069 1367 aa18.53■□□□□ 0.56
HOXC10-204ENST00000514415 ARHGAP35Q9NRY4 1499 aa18.52■□□□□ 0.56
HOXC10-204ENST00000514415 ABCA10Q8WWZ4 1543 aa18.51■□□□□ 0.55
HOXC10-204ENST00000514415 WDR97A6NE52 1622 aa18.5■□□□□ 0.55
HOXC10-204ENST00000514415 CLSPNQ9HAW4 1339 aa18.49■□□□□ 0.55
HOXC10-204ENST00000514415 RRBP1Q9P2E9 1410 aaKnown RBP18.49■□□□□ 0.55
HOXC10-204ENST00000514415 CTTNBP2Q8WZ74 1663 aa18.48■□□□□ 0.55
HOXC10-204ENST00000514415 CARMIL1Q5VZK9 1371 aa18.46■□□□□ 0.55
HOXC10-204ENST00000514415 TOPBP1Q92547 1522 aa18.46■□□□□ 0.55
HOXC10-204ENST00000514415 CFAP43Q8NDM7 1665 aa18.44■□□□□ 0.54
HOXC10-204ENST00000514415 TTBK1Q5TCY1 1321 aaPredicted RBP18.44■□□□□ 0.54
HOXC10-204ENST00000514415 EFCAB5A4FU69 1503 aa18.44■□□□□ 0.54
HOXC10-204ENST00000514415 TIAM1Q13009 1591 aa18.42■□□□□ 0.54
HOXC10-204ENST00000514415 FHAD1B1AJZ9 1412 aa18.4■□□□□ 0.54
HOXC10-204ENST00000514415 POLA1P09884 1462 aaPredicted RBP18.39■□□□□ 0.53
HOXC10-204ENST00000514415 AQRO60306 1485 aaKnown RBP eCLIP18.35■□□□□ 0.53
HOXC10-204ENST00000514415 ABCA5Q8WWZ7 1642 aa18.34■□□□□ 0.53
HOXC10-204ENST00000514415 ZNF316A6NFI3 1004 aaPredicted RBP18.33■□□□□ 0.52
HOXC10-204ENST00000514415 HNRNPUL2Q1KMD3 747 aaKnown RBP18.33■□□□□ 0.52
HOXC10-204ENST00000514415 KIF21AQ7Z4S6 1674 aa18.31■□□□□ 0.52
HOXC10-204ENST00000514415 DIEXFQ68CQ4 756 aaKnown RBP18.31■□□□□ 0.52
HOXC10-204ENST00000514415 PDS5BQ9NTI5 1447 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 108 ms