RNA–Protein interactions for RNA: ENST00000514179.5

RAPGEF6-213, Transcript of Rap guanine nucleotide exchange factor 6, humanhuman

TSL 2

Gene RAPGEF6, Length 2,200 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF6-213ENST00000514179 NISCHQ9Y2I1 1504 aa27.12■■□□□ 1.93
RAPGEF6-213ENST00000514179 CCDC180Q9P1Z9 1646 aa23.23■■□□□ 1.31
RAPGEF6-213ENST00000514179 SHROOM4Q9ULL8 1493 aa22.92■■□□□ 1.26
RAPGEF6-213ENST00000514179 ZCCHC6Q5VYS8 1495 aaKnown RBP22.91■■□□□ 1.26
RAPGEF6-213ENST00000514179 DCAF8L2P0C7V8 631 aa22.45■■□□□ 1.18
RAPGEF6-213ENST00000514179 SUPT5HO00267 1087 aaKnown RBP22.37■■□□□ 1.17
RAPGEF6-213ENST00000514179 DCAF1Q9Y4B6 1507 aa22.25■■□□□ 1.15
RAPGEF6-213ENST00000514179 SCRIBQ14160 1630 aa21.72■■□□□ 1.07
RAPGEF6-213ENST00000514179 CHIC1Q5VXU3 224 aa21.71■■□□□ 1.07
RAPGEF6-213ENST00000514179 MYO15BQ96JP2 1530 aa21.68■■□□□ 1.06
RAPGEF6-213ENST00000514179 ABCC9O60706 1549 aa21.64■■□□□ 1.05
RAPGEF6-213ENST00000514179 NACADO15069 1562 aa21.47■■□□□ 1.03
RAPGEF6-213ENST00000514179 RSF1Q96T23 1441 aaPredicted RBP21.35■■□□□ 1.01
RAPGEF6-213ENST00000514179 RB1CC1Q8TDY2 1594 aa21.18■□□□□ 0.98
RAPGEF6-213ENST00000514179 CECR2Q9BXF3 1484 aa21.17■□□□□ 0.98
RAPGEF6-213ENST00000514179 MROH2BQ7Z745 1585 aa21.08■□□□□ 0.96
RAPGEF6-213ENST00000514179 LOC105371045A0A1W2PR82 267 aa21.07■□□□□ 0.96
RAPGEF6-213ENST00000514179 PCGF6Q9BYE7 350 aa21.05■□□□□ 0.96
RAPGEF6-213ENST00000514179 HRCP23327 699 aa21.02■□□□□ 0.96
RAPGEF6-213ENST00000514179 WIZO95785 1651 aa20.99■□□□□ 0.95
RAPGEF6-213ENST00000514179 UNC13AQ9UPW8 1703 aa20.97■□□□□ 0.95
RAPGEF6-213ENST00000514179 BAZ1AQ9NRL2 1556 aaPredicted RBP20.85■□□□□ 0.93
RAPGEF6-213ENST00000514179 TRIM41Q8WV44 630 aa20.84■□□□□ 0.93
RAPGEF6-213ENST00000514179 SMARCA4P51532 1647 aa20.74■□□□□ 0.91
RAPGEF6-213ENST00000514179 FAM9AQ8IZU1 332 aaPredicted RBP20.68■□□□□ 0.9
RAPGEF6-213ENST00000514179 TRIM26Q12899 539 aaPredicted RBP20.66■□□□□ 0.9
RAPGEF6-213ENST00000514179 TOP2AP11388 1531 aaKnown RBP20.64■□□□□ 0.9
RAPGEF6-213ENST00000514179 EIF4G1Q04637 1599 aaKnown RBP20.64■□□□□ 0.89
RAPGEF6-213ENST00000514179 BICRAQ9NZM4 1560 aa20.64■□□□□ 0.89
RAPGEF6-213ENST00000514179 PABPN1Q86U42 306 aaKnown RBP eCLIP20.61■□□□□ 0.89
RAPGEF6-213ENST00000514179 PPARGC1BQ86YN6 1023 aaKnown RBP20.58■□□□□ 0.89
RAPGEF6-213ENST00000514179 SMARCA2P51531 1590 aa20.53■□□□□ 0.88
RAPGEF6-213ENST00000514179 CCDC88BA6NC98 1476 aa20.52■□□□□ 0.87
RAPGEF6-213ENST00000514179 EHMT2Q96KQ7 1210 aa20.51■□□□□ 0.87
RAPGEF6-213ENST00000514179 ABCC8Q09428 1581 aa20.43■□□□□ 0.86
RAPGEF6-213ENST00000514179 PEG3Q9GZU2 1588 aa20.34■□□□□ 0.85
RAPGEF6-213ENST00000514179 ZEB1P37275 1124 aaPredicted RBP20.22■□□□□ 0.83
RAPGEF6-213ENST00000514179 ATAD2BQ9ULI0 1458 aa20.21■□□□□ 0.83
RAPGEF6-213ENST00000514179 BAZ1BQ9UIG0 1483 aaKnown RBP20.15■□□□□ 0.82
RAPGEF6-213ENST00000514179 SOGA1O94964 1423 aa20.14■□□□□ 0.82
RAPGEF6-213ENST00000514179 RUSC2Q8N2Y8 1516 aa20.08■□□□□ 0.8
RAPGEF6-213ENST00000514179 WRNQ14191 1432 aaPredicted RBP eCLIP20.06■□□□□ 0.8
RAPGEF6-213ENST00000514179 SYNJ1O43426 1573 aa20.04■□□□□ 0.8
RAPGEF6-213ENST00000514179 EEA1Q15075 1411 aa19.99■□□□□ 0.79
RAPGEF6-213ENST00000514179 CSRNP3Q8WYN3 585 aa19.96■□□□□ 0.79
RAPGEF6-213ENST00000514179 CEP162Q5TB80 1403 aa19.95■□□□□ 0.78
RAPGEF6-213ENST00000514179 TNIKQ9UKE5 1360 aa19.91■□□□□ 0.78
RAPGEF6-213ENST00000514179 UBTFP17480 764 aaKnown RBP19.87■□□□□ 0.77
RAPGEF6-213ENST00000514179 HMGXB3Q12766 1538 aa19.86■□□□□ 0.77
RAPGEF6-213ENST00000514179 GOLGA3Q08378 1498 aa19.86■□□□□ 0.77
RAPGEF6-213ENST00000514179 TTBK1Q5TCY1 1321 aaPredicted RBP19.85■□□□□ 0.77
RAPGEF6-213ENST00000514179 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.84■□□□□ 0.77
RAPGEF6-213ENST00000514179 NCAPD3P42695 1498 aa19.84■□□□□ 0.77
RAPGEF6-213ENST00000514179 CCER1Q8TC90 406 aaPredicted RBP19.82■□□□□ 0.76
RAPGEF6-213ENST00000514179 SLC24A1O60721 1099 aa19.79■□□□□ 0.76
RAPGEF6-213ENST00000514179 KIF21BO75037 1637 aa19.79■□□□□ 0.76
RAPGEF6-213ENST00000514179 TOP2BQ02880 1626 aa19.79■□□□□ 0.76
RAPGEF6-213ENST00000514179 CEP164Q9UPV0 1460 aa19.77■□□□□ 0.76
RAPGEF6-213ENST00000514179 BIVM-ERCC5R4GMW8 1640 aa19.75■□□□□ 0.75
RAPGEF6-213ENST00000514179 RAPGEF2Q9Y4G8 1499 aa19.68■□□□□ 0.74
RAPGEF6-213ENST00000514179 CUX1P39880 1505 aa19.65■□□□□ 0.74
RAPGEF6-213ENST00000514179 CFTRP13569 1480 aa19.63■□□□□ 0.73
RAPGEF6-213ENST00000514179 CLIP1P30622 1438 aa19.62■□□□□ 0.73
RAPGEF6-213ENST00000514179 PRDM2Q13029 1718 aa19.58■□□□□ 0.73
RAPGEF6-213ENST00000514179 RANGAP1P46060 587 aaPredicted RBP19.54■□□□□ 0.72
RAPGEF6-213ENST00000514179 CC2D2AQ9P2K1 1620 aa19.52■□□□□ 0.71
RAPGEF6-213ENST00000514179 VPS8Q8N3P4 1428 aa19.51■□□□□ 0.71
RAPGEF6-213ENST00000514179 PRXQ9BXM0 1461 aa19.5■□□□□ 0.71
RAPGEF6-213ENST00000514179 ERICH3Q5RHP9 1530 aa19.49■□□□□ 0.71
RAPGEF6-213ENST00000514179 APLP2Q06481 763 aa19.45■□□□□ 0.7
RAPGEF6-213ENST00000514179 KIF27Q86VH2 1401 aa19.45■□□□□ 0.7
RAPGEF6-213ENST00000514179 CADPSQ9ULU8 1353 aa19.43■□□□□ 0.7
RAPGEF6-213ENST00000514179 HNRNPUL2Q1KMD3 747 aaKnown RBP19.41■□□□□ 0.7
RAPGEF6-213ENST00000514179 DIEXFQ68CQ4 756 aaKnown RBP19.39■□□□□ 0.69
RAPGEF6-213ENST00000514179 ARAP1Q96P48 1450 aa19.37■□□□□ 0.69
RAPGEF6-213ENST00000514179 SCAF1Q9H7N4 1312 aaKnown RBP19.35■□□□□ 0.69
RAPGEF6-213ENST00000514179 CUX2O14529 1486 aa19.34■□□□□ 0.69
RAPGEF6-213ENST00000514179 FGD5Q6ZNL6 1462 aa19.32■□□□□ 0.68
RAPGEF6-213ENST00000514179 FANCD2Q9BXW9 1451 aa19.28■□□□□ 0.68
RAPGEF6-213ENST00000514179 ZNF316A6NFI3 1004 aaPredicted RBP19.25■□□□□ 0.67
RAPGEF6-213ENST00000514179 IGF1RP08069 1367 aa19.25■□□□□ 0.67
RAPGEF6-213ENST00000514179 NESP48681 1621 aa19.23■□□□□ 0.67
RAPGEF6-213ENST00000514179 ARHGAP35Q9NRY4 1499 aa19.23■□□□□ 0.67
RAPGEF6-213ENST00000514179 ACIN1Q9UKV3 1341 aaKnown RBP19.21■□□□□ 0.67
RAPGEF6-213ENST00000514179 KANK4Q5T7N3 995 aaPredicted RBP19.18■□□□□ 0.66
RAPGEF6-213ENST00000514179 DNMBPQ6XZF7 1577 aa19.18■□□□□ 0.66
RAPGEF6-213ENST00000514179 CARMIL1Q5VZK9 1371 aa19.17■□□□□ 0.66
RAPGEF6-213ENST00000514179 NEUROD1Q13562 356 aa19.16■□□□□ 0.66
RAPGEF6-213ENST00000514179 RAD54L2Q9Y4B4 1467 aa19.15■□□□□ 0.66
RAPGEF6-213ENST00000514179 CENPBP07199 599 aaPredicted RBP19.15■□□□□ 0.66
RAPGEF6-213ENST00000514179 TOPBP1Q92547 1522 aa19.14■□□□□ 0.66
RAPGEF6-213ENST00000514179 POLA1P09884 1462 aaPredicted RBP19.12■□□□□ 0.65
RAPGEF6-213ENST00000514179 ABCA10Q8WWZ4 1543 aa19.08■□□□□ 0.64
RAPGEF6-213ENST00000514179 LAMC3Q9Y6N6 1575 aa19.06■□□□□ 0.64
RAPGEF6-213ENST00000514179 DNAJC5BQ9UF47 199 aa19.04■□□□□ 0.64
RAPGEF6-213ENST00000514179 URB2Q14146 1524 aaKnown RBP19.03■□□□□ 0.64
RAPGEF6-213ENST00000514179 RRBP1Q9P2E9 1410 aaKnown RBP19.01■□□□□ 0.63
RAPGEF6-213ENST00000514179 WDR97A6NE52 1622 aa19.01■□□□□ 0.63
RAPGEF6-213ENST00000514179 DHX57Q6P158 1386 aaKnown RBP19■□□□□ 0.63
RAPGEF6-213ENST00000514179 TIAM1Q13009 1591 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms