RNA–Protein interactions for RNA: ENST00000514042.1

CTD-2201I18.1-202, humanhuman

TSL 1 (best) BASIC

Gene CTD-2201I18.1, Length 2,705 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTD-2201I18.1-202ENST00000514042 NISCHQ9Y2I1 1504 aa17.14■□□□□ 0.33
CTD-2201I18.1-202ENST00000514042 CCDC180Q9P1Z9 1646 aa14.68□□□□□ -0.06
CTD-2201I18.1-202ENST00000514042 ZCCHC6Q5VYS8 1495 aaKnown RBP14.46□□□□□ -0.09
CTD-2201I18.1-202ENST00000514042 SHROOM4Q9ULL8 1493 aa14.46□□□□□ -0.09
CTD-2201I18.1-202ENST00000514042 DCAF8L2P0C7V8 631 aa14.3□□□□□ -0.12
CTD-2201I18.1-202ENST00000514042 SUPT5HO00267 1087 aaKnown RBP14.1□□□□□ -0.15
CTD-2201I18.1-202ENST00000514042 DCAF1Q9Y4B6 1507 aa14.07□□□□□ -0.16
CTD-2201I18.1-202ENST00000514042 ABCC9O60706 1549 aa13.77□□□□□ -0.21
CTD-2201I18.1-202ENST00000514042 MYO15BQ96JP2 1530 aa13.75□□□□□ -0.21
CTD-2201I18.1-202ENST00000514042 SCRIBQ14160 1630 aa13.72□□□□□ -0.21
CTD-2201I18.1-202ENST00000514042 NACADO15069 1562 aa13.63□□□□□ -0.23
CTD-2201I18.1-202ENST00000514042 CHIC1Q5VXU3 224 aa13.6□□□□□ -0.23
CTD-2201I18.1-202ENST00000514042 RSF1Q96T23 1441 aaPredicted RBP13.48□□□□□ -0.25
CTD-2201I18.1-202ENST00000514042 RB1CC1Q8TDY2 1594 aa13.45□□□□□ -0.26
CTD-2201I18.1-202ENST00000514042 CECR2Q9BXF3 1484 aa13.37□□□□□ -0.27
CTD-2201I18.1-202ENST00000514042 MROH2BQ7Z745 1585 aa13.31□□□□□ -0.28
CTD-2201I18.1-202ENST00000514042 WIZO95785 1651 aa13.22□□□□□ -0.29
CTD-2201I18.1-202ENST00000514042 UNC13AQ9UPW8 1703 aa13.21□□□□□ -0.29
CTD-2201I18.1-202ENST00000514042 BAZ1AQ9NRL2 1556 aaPredicted RBP13.2□□□□□ -0.3
CTD-2201I18.1-202ENST00000514042 LOC105371045A0A1W2PR82 267 aa13.18□□□□□ -0.3
CTD-2201I18.1-202ENST00000514042 TRIM41Q8WV44 630 aa13.17□□□□□ -0.3
CTD-2201I18.1-202ENST00000514042 PABPN1Q86U42 306 aaKnown RBP eCLIP13.12□□□□□ -0.31
CTD-2201I18.1-202ENST00000514042 SMARCA4P51532 1647 aa13.1□□□□□ -0.31
CTD-2201I18.1-202ENST00000514042 BICRAQ9NZM4 1560 aa13.06□□□□□ -0.32
CTD-2201I18.1-202ENST00000514042 FAM9AQ8IZU1 332 aaPredicted RBP13.03□□□□□ -0.32
CTD-2201I18.1-202ENST00000514042 TOP2AP11388 1531 aaKnown RBP13.03□□□□□ -0.32
CTD-2201I18.1-202ENST00000514042 PCGF6Q9BYE7 350 aa12.98□□□□□ -0.33
CTD-2201I18.1-202ENST00000514042 CCDC88BA6NC98 1476 aa12.97□□□□□ -0.33
CTD-2201I18.1-202ENST00000514042 SMARCA2P51531 1590 aa12.94□□□□□ -0.34
CTD-2201I18.1-202ENST00000514042 EIF4G1Q04637 1599 aaKnown RBP12.94□□□□□ -0.34
CTD-2201I18.1-202ENST00000514042 EHMT2Q96KQ7 1210 aa12.92□□□□□ -0.34
CTD-2201I18.1-202ENST00000514042 ABCC8Q09428 1581 aa12.86□□□□□ -0.35
CTD-2201I18.1-202ENST00000514042 PEG3Q9GZU2 1588 aa12.86□□□□□ -0.35
CTD-2201I18.1-202ENST00000514042 HRCP23327 699 aa12.82□□□□□ -0.36
CTD-2201I18.1-202ENST00000514042 ATAD2BQ9ULI0 1458 aa12.81□□□□□ -0.36
CTD-2201I18.1-202ENST00000514042 TRIM26Q12899 539 aaPredicted RBP12.79□□□□□ -0.36
CTD-2201I18.1-202ENST00000514042 BAZ1BQ9UIG0 1483 aaKnown RBP12.78□□□□□ -0.36
CTD-2201I18.1-202ENST00000514042 SOGA1O94964 1423 aa12.7□□□□□ -0.38
CTD-2201I18.1-202ENST00000514042 WRNQ14191 1432 aaPredicted RBP eCLIP12.68□□□□□ -0.38
CTD-2201I18.1-202ENST00000514042 RUSC2Q8N2Y8 1516 aa12.64□□□□□ -0.39
CTD-2201I18.1-202ENST00000514042 CSRNP3Q8WYN3 585 aa12.63□□□□□ -0.39
CTD-2201I18.1-202ENST00000514042 EEA1Q15075 1411 aa12.63□□□□□ -0.39
CTD-2201I18.1-202ENST00000514042 SYNJ1O43426 1573 aa12.61□□□□□ -0.39
CTD-2201I18.1-202ENST00000514042 NCAPD3P42695 1498 aa12.6□□□□□ -0.39
CTD-2201I18.1-202ENST00000514042 PPARGC1BQ86YN6 1023 aaKnown RBP12.6□□□□□ -0.39
CTD-2201I18.1-202ENST00000514042 HMGXB3Q12766 1538 aa12.59□□□□□ -0.39
CTD-2201I18.1-202ENST00000514042 UBTFP17480 764 aaKnown RBP12.58□□□□□ -0.4
CTD-2201I18.1-202ENST00000514042 TNIKQ9UKE5 1360 aa12.56□□□□□ -0.4
CTD-2201I18.1-202ENST00000514042 CEP162Q5TB80 1403 aa12.56□□□□□ -0.4
CTD-2201I18.1-202ENST00000514042 GOLGA3Q08378 1498 aa12.53□□□□□ -0.4
CTD-2201I18.1-202ENST00000514042 TOP2BQ02880 1626 aa12.49□□□□□ -0.41
CTD-2201I18.1-202ENST00000514042 CEP164Q9UPV0 1460 aa12.48□□□□□ -0.41
CTD-2201I18.1-202ENST00000514042 TTBK1Q5TCY1 1321 aaPredicted RBP12.45□□□□□ -0.42
CTD-2201I18.1-202ENST00000514042 KIF21BO75037 1637 aa12.45□□□□□ -0.42
CTD-2201I18.1-202ENST00000514042 CFTRP13569 1480 aa12.44□□□□□ -0.42
CTD-2201I18.1-202ENST00000514042 BIVM-ERCC5R4GMW8 1640 aa12.44□□□□□ -0.42
CTD-2201I18.1-202ENST00000514042 ZEB1P37275 1124 aaPredicted RBP12.43□□□□□ -0.42
CTD-2201I18.1-202ENST00000514042 CUX1P39880 1505 aa12.4□□□□□ -0.42
CTD-2201I18.1-202ENST00000514042 RAPGEF2Q9Y4G8 1499 aa12.4□□□□□ -0.42
CTD-2201I18.1-202ENST00000514042 CC2D2AQ9P2K1 1620 aa12.39□□□□□ -0.43
CTD-2201I18.1-202ENST00000514042 CLIP1P30622 1438 aa12.37□□□□□ -0.43
CTD-2201I18.1-202ENST00000514042 RANGAP1P46060 587 aaPredicted RBP12.37□□□□□ -0.43
CTD-2201I18.1-202ENST00000514042 CADPSQ9ULU8 1353 aa12.36□□□□□ -0.43
CTD-2201I18.1-202ENST00000514042 PRDM2Q13029 1718 aa12.33□□□□□ -0.44
CTD-2201I18.1-202ENST00000514042 KIF27Q86VH2 1401 aa12.32□□□□□ -0.44
CTD-2201I18.1-202ENST00000514042 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.31□□□□□ -0.44
CTD-2201I18.1-202ENST00000514042 PRXQ9BXM0 1461 aa12.3□□□□□ -0.44
CTD-2201I18.1-202ENST00000514042 ERICH3Q5RHP9 1530 aa12.29□□□□□ -0.44
CTD-2201I18.1-202ENST00000514042 VPS8Q8N3P4 1428 aa12.29□□□□□ -0.44
CTD-2201I18.1-202ENST00000514042 CCER1Q8TC90 406 aaPredicted RBP12.29□□□□□ -0.44
CTD-2201I18.1-202ENST00000514042 APLP2Q06481 763 aa12.27□□□□□ -0.44
CTD-2201I18.1-202ENST00000514042 CUX2O14529 1486 aa12.24□□□□□ -0.45
CTD-2201I18.1-202ENST00000514042 FANCD2Q9BXW9 1451 aa12.23□□□□□ -0.45
CTD-2201I18.1-202ENST00000514042 FGD5Q6ZNL6 1462 aa12.23□□□□□ -0.45
CTD-2201I18.1-202ENST00000514042 NESP48681 1621 aa12.19□□□□□ -0.46
CTD-2201I18.1-202ENST00000514042 IGF1RP08069 1367 aa12.19□□□□□ -0.46
CTD-2201I18.1-202ENST00000514042 ARAP1Q96P48 1450 aa12.18□□□□□ -0.46
CTD-2201I18.1-202ENST00000514042 HNRNPUL2Q1KMD3 747 aaKnown RBP12.16□□□□□ -0.46
CTD-2201I18.1-202ENST00000514042 CARMIL1Q5VZK9 1371 aa12.15□□□□□ -0.46
CTD-2201I18.1-202ENST00000514042 DNMBPQ6XZF7 1577 aa12.14□□□□□ -0.47
CTD-2201I18.1-202ENST00000514042 TOPBP1Q92547 1522 aa12.12□□□□□ -0.47
CTD-2201I18.1-202ENST00000514042 RAD54L2Q9Y4B4 1467 aa12.12□□□□□ -0.47
CTD-2201I18.1-202ENST00000514042 ARHGAP35Q9NRY4 1499 aa12.11□□□□□ -0.47
CTD-2201I18.1-202ENST00000514042 LAMC3Q9Y6N6 1575 aa12.11□□□□□ -0.47
CTD-2201I18.1-202ENST00000514042 POLA1P09884 1462 aaPredicted RBP12.11□□□□□ -0.47
CTD-2201I18.1-202ENST00000514042 DNAJC5BQ9UF47 199 aa12.1□□□□□ -0.47
CTD-2201I18.1-202ENST00000514042 KANK4Q5T7N3 995 aaPredicted RBP12.09□□□□□ -0.47
CTD-2201I18.1-202ENST00000514042 ABCA10Q8WWZ4 1543 aa12.08□□□□□ -0.48
CTD-2201I18.1-202ENST00000514042 URB2Q14146 1524 aaKnown RBP12.05□□□□□ -0.48
CTD-2201I18.1-202ENST00000514042 PDS5BQ9NTI5 1447 aa12.05□□□□□ -0.48
CTD-2201I18.1-202ENST00000514042 P3H3Q8IVL6 736 aa12.02□□□□□ -0.49
CTD-2201I18.1-202ENST00000514042 TDRD9Q8NDG6 1382 aaKnown RBP12□□□□□ -0.49
CTD-2201I18.1-202ENST00000514042 CUL7Q14999 1698 aa11.99□□□□□ -0.49
CTD-2201I18.1-202ENST00000514042 KIF21AQ7Z4S6 1674 aa11.98□□□□□ -0.49
CTD-2201I18.1-202ENST00000514042 ATP1B4Q9UN42 357 aaPredicted RBP11.97□□□□□ -0.49
CTD-2201I18.1-202ENST00000514042 WDR97A6NE52 1622 aa11.97□□□□□ -0.49
CTD-2201I18.1-202ENST00000514042 RRBP1Q9P2E9 1410 aaKnown RBP11.96□□□□□ -0.49
CTD-2201I18.1-202ENST00000514042 FHAD1B1AJZ9 1412 aa11.96□□□□□ -0.5
CTD-2201I18.1-202ENST00000514042 TIAM1Q13009 1591 aa11.95□□□□□ -0.5
CTD-2201I18.1-202ENST00000514042 GAPVD1Q14C86 1478 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms