RNA–Protein interactions for RNA: ENST00000513338.1

NCOA4P4-201, Transcript of nuclear receptor coactivator 4 pseudogene 4, humanhuman

BASIC

Gene NCOA4P4, Length 1,861 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOA4P4-201ENST00000513338 NISCHQ9Y2I1 1504 aa20.03■□□□□ 0.8
NCOA4P4-201ENST00000513338 CCDC180Q9P1Z9 1646 aa17.24■□□□□ 0.35
NCOA4P4-201ENST00000513338 ZCCHC6Q5VYS8 1495 aaKnown RBP16.93■□□□□ 0.3
NCOA4P4-201ENST00000513338 SHROOM4Q9ULL8 1493 aa16.76■□□□□ 0.27
NCOA4P4-201ENST00000513338 DCAF1Q9Y4B6 1507 aa16.54■□□□□ 0.24
NCOA4P4-201ENST00000513338 AEBP2Q6ZN18 517 aaPredicted RBP16.54■□□□□ 0.24
NCOA4P4-201ENST00000513338 DCAF8L2P0C7V8 631 aa16.5■□□□□ 0.23
NCOA4P4-201ENST00000513338 SUPT5HO00267 1087 aaKnown RBP16.37■□□□□ 0.21
NCOA4P4-201ENST00000513338 MYO15BQ96JP2 1530 aa16.16■□□□□ 0.18
NCOA4P4-201ENST00000513338 SCRIBQ14160 1630 aa15.97■□□□□ 0.15
NCOA4P4-201ENST00000513338 ABCC9O60706 1549 aa15.96■□□□□ 0.15
NCOA4P4-201ENST00000513338 NACADO15069 1562 aa15.96■□□□□ 0.15
NCOA4P4-201ENST00000513338 CHIC1Q5VXU3 224 aa15.86■□□□□ 0.13
NCOA4P4-201ENST00000513338 RSF1Q96T23 1441 aaPredicted RBP15.73■□□□□ 0.11
NCOA4P4-201ENST00000513338 RB1CC1Q8TDY2 1594 aa15.73■□□□□ 0.11
NCOA4P4-201ENST00000513338 CECR2Q9BXF3 1484 aa15.54■□□□□ 0.08
NCOA4P4-201ENST00000513338 MROH2BQ7Z745 1585 aa15.51■□□□□ 0.07
NCOA4P4-201ENST00000513338 BAZ1AQ9NRL2 1556 aaPredicted RBP15.45■□□□□ 0.06
NCOA4P4-201ENST00000513338 WIZO95785 1651 aa15.41■□□□□ 0.06
NCOA4P4-201ENST00000513338 UNC13AQ9UPW8 1703 aa15.4■□□□□ 0.06
NCOA4P4-201ENST00000513338 TRIM41Q8WV44 630 aa15.34■□□□□ 0.05
NCOA4P4-201ENST00000513338 SMARCA4P51532 1647 aa15.31■□□□□ 0.04
NCOA4P4-201ENST00000513338 LOC105371045A0A1W2PR82 267 aa15.29■□□□□ 0.04
NCOA4P4-201ENST00000513338 TOP2AP11388 1531 aaKnown RBP15.26■□□□□ 0.03
NCOA4P4-201ENST00000513338 BICRAQ9NZM4 1560 aa15.2■□□□□ 0.02
NCOA4P4-201ENST00000513338 EIF4G1Q04637 1599 aaKnown RBP15.18■□□□□ 0.02
NCOA4P4-201ENST00000513338 PABPN1Q86U42 306 aaKnown RBP eCLIP15.14■□□□□ 0.01
NCOA4P4-201ENST00000513338 PCGF6Q9BYE7 350 aa15.14■□□□□ 0.01
NCOA4P4-201ENST00000513338 SMARCA2P51531 1590 aa15.13■□□□□ 0.01
NCOA4P4-201ENST00000513338 CCDC88BA6NC98 1476 aa15.12■□□□□ 0.01
NCOA4P4-201ENST00000513338 FAM9AQ8IZU1 332 aaPredicted RBP15.1■□□□□ 0.01
NCOA4P4-201ENST00000513338 PEG3Q9GZU2 1588 aa15.07■□□□□ 0
NCOA4P4-201ENST00000513338 HRCP23327 699 aa15.07■□□□□ 0
NCOA4P4-201ENST00000513338 TRIM26Q12899 539 aaPredicted RBP15□□□□□ -0.01
NCOA4P4-201ENST00000513338 ABCC8Q09428 1581 aa14.97□□□□□ -0.01
NCOA4P4-201ENST00000513338 ATAD2BQ9ULI0 1458 aa14.94□□□□□ -0.02
NCOA4P4-201ENST00000513338 BAZ1BQ9UIG0 1483 aaKnown RBP14.92□□□□□ -0.02
NCOA4P4-201ENST00000513338 EHMT2Q96KQ7 1210 aa14.89□□□□□ -0.03
NCOA4P4-201ENST00000513338 EEA1Q15075 1411 aa14.86□□□□□ -0.03
NCOA4P4-201ENST00000513338 WRNQ14191 1432 aaPredicted RBP eCLIP14.82□□□□□ -0.04
NCOA4P4-201ENST00000513338 SOGA1O94964 1423 aa14.78□□□□□ -0.04
NCOA4P4-201ENST00000513338 HMGXB3Q12766 1538 aa14.75□□□□□ -0.05
NCOA4P4-201ENST00000513338 CSRNP3Q8WYN3 585 aa14.74□□□□□ -0.05
NCOA4P4-201ENST00000513338 SYNJ1O43426 1573 aa14.73□□□□□ -0.05
NCOA4P4-201ENST00000513338 TNIKQ9UKE5 1360 aa14.72□□□□□ -0.05
NCOA4P4-201ENST00000513338 NCAPD3P42695 1498 aa14.71□□□□□ -0.05
NCOA4P4-201ENST00000513338 GOLGA3Q08378 1498 aa14.69□□□□□ -0.06
NCOA4P4-201ENST00000513338 CEP162Q5TB80 1403 aa14.69□□□□□ -0.06
NCOA4P4-201ENST00000513338 RUSC2Q8N2Y8 1516 aa14.69□□□□□ -0.06
NCOA4P4-201ENST00000513338 ZEB1P37275 1124 aaPredicted RBP14.67□□□□□ -0.06
NCOA4P4-201ENST00000513338 PPARGC1BQ86YN6 1023 aaKnown RBP14.65□□□□□ -0.06
NCOA4P4-201ENST00000513338 CEP164Q9UPV0 1460 aa14.64□□□□□ -0.07
NCOA4P4-201ENST00000513338 UBTFP17480 764 aaKnown RBP14.63□□□□□ -0.07
NCOA4P4-201ENST00000513338 KIF21BO75037 1637 aa14.63□□□□□ -0.07
NCOA4P4-201ENST00000513338 TOP2BQ02880 1626 aa14.62□□□□□ -0.07
NCOA4P4-201ENST00000513338 BIVM-ERCC5R4GMW8 1640 aa14.59□□□□□ -0.07
NCOA4P4-201ENST00000513338 CFTRP13569 1480 aa14.53□□□□□ -0.08
NCOA4P4-201ENST00000513338 PRDM2Q13029 1718 aa14.49□□□□□ -0.09
NCOA4P4-201ENST00000513338 CUX1P39880 1505 aa14.47□□□□□ -0.09
NCOA4P4-201ENST00000513338 CLIP1P30622 1438 aa14.47□□□□□ -0.09
NCOA4P4-201ENST00000513338 RAPGEF2Q9Y4G8 1499 aa14.47□□□□□ -0.09
NCOA4P4-201ENST00000513338 ERICH3Q5RHP9 1530 aa14.45□□□□□ -0.1
NCOA4P4-201ENST00000513338 KIF27Q86VH2 1401 aa14.41□□□□□ -0.1
NCOA4P4-201ENST00000513338 CC2D2AQ9P2K1 1620 aa14.41□□□□□ -0.1
NCOA4P4-201ENST00000513338 VPS8Q8N3P4 1428 aa14.41□□□□□ -0.1
NCOA4P4-201ENST00000513338 PRXQ9BXM0 1461 aa14.4□□□□□ -0.1
NCOA4P4-201ENST00000513338 TTBK1Q5TCY1 1321 aaPredicted RBP14.4□□□□□ -0.1
NCOA4P4-201ENST00000513338 CADPSQ9ULU8 1353 aa14.4□□□□□ -0.1
NCOA4P4-201ENST00000513338 CCER1Q8TC90 406 aaPredicted RBP14.36□□□□□ -0.11
NCOA4P4-201ENST00000513338 APLP2Q06481 763 aa14.35□□□□□ -0.11
NCOA4P4-201ENST00000513338 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.33□□□□□ -0.11
NCOA4P4-201ENST00000513338 RANGAP1P46060 587 aaPredicted RBP14.28□□□□□ -0.12
NCOA4P4-201ENST00000513338 CUX2O14529 1486 aa14.27□□□□□ -0.12
NCOA4P4-201ENST00000513338 FGD5Q6ZNL6 1462 aa14.26□□□□□ -0.13
NCOA4P4-201ENST00000513338 FANCD2Q9BXW9 1451 aa14.25□□□□□ -0.13
NCOA4P4-201ENST00000513338 ARAP1Q96P48 1450 aa14.25□□□□□ -0.13
NCOA4P4-201ENST00000513338 DNMBPQ6XZF7 1577 aa14.2□□□□□ -0.14
NCOA4P4-201ENST00000513338 IGF1RP08069 1367 aa14.2□□□□□ -0.14
NCOA4P4-201ENST00000513338 CARMIL1Q5VZK9 1371 aa14.17□□□□□ -0.14
NCOA4P4-201ENST00000513338 LAMC3Q9Y6N6 1575 aa14.16□□□□□ -0.14
NCOA4P4-201ENST00000513338 ARHGAP35Q9NRY4 1499 aa14.15□□□□□ -0.14
NCOA4P4-201ENST00000513338 TOPBP1Q92547 1522 aa14.14□□□□□ -0.15
NCOA4P4-201ENST00000513338 HNRNPUL2Q1KMD3 747 aaKnown RBP14.14□□□□□ -0.15
NCOA4P4-201ENST00000513338 ABCA10Q8WWZ4 1543 aa14.13□□□□□ -0.15
NCOA4P4-201ENST00000513338 NESP48681 1621 aa14.12□□□□□ -0.15
NCOA4P4-201ENST00000513338 POLA1P09884 1462 aaPredicted RBP14.11□□□□□ -0.15
NCOA4P4-201ENST00000513338 RAD54L2Q9Y4B4 1467 aa14.08□□□□□ -0.16
NCOA4P4-201ENST00000513338 CUL7Q14999 1698 aa14.07□□□□□ -0.16
NCOA4P4-201ENST00000513338 KANK4Q5T7N3 995 aaPredicted RBP14.06□□□□□ -0.16
NCOA4P4-201ENST00000513338 PDS5BQ9NTI5 1447 aa14.05□□□□□ -0.16
NCOA4P4-201ENST00000513338 MAP3K1Q13233 1512 aa14.04□□□□□ -0.16
NCOA4P4-201ENST00000513338 RRBP1Q9P2E9 1410 aaKnown RBP14.04□□□□□ -0.16
NCOA4P4-201ENST00000513338 URB2Q14146 1524 aaKnown RBP14.03□□□□□ -0.16
NCOA4P4-201ENST00000513338 FHAD1B1AJZ9 1412 aa14.03□□□□□ -0.16
NCOA4P4-201ENST00000513338 WDR97A6NE52 1622 aa14.02□□□□□ -0.17
NCOA4P4-201ENST00000513338 TIAM1Q13009 1591 aa14.01□□□□□ -0.17
NCOA4P4-201ENST00000513338 EFCAB5A4FU69 1503 aa14□□□□□ -0.17
NCOA4P4-201ENST00000513338 CTTNBP2Q8WZ74 1663 aa13.98□□□□□ -0.17
NCOA4P4-201ENST00000513338 CCNB3Q8WWL7 1395 aa13.98□□□□□ -0.17
NCOA4P4-201ENST00000513338 CLSPNQ9HAW4 1339 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms