RNA–Protein interactions for RNA: ENST00000513268.1

H2AFY-220, Transcript of H2A histone family member Y, humanhuman

TSL 3

Gene H2AFY, Length 501 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFY-220ENST00000513268 AEBP2Q6ZN18 517 aaPredicted RBP25.95■■□□□ 1.74
H2AFY-220ENST00000513268 CHIC1Q5VXU3 224 aa24.32■■□□□ 1.48
H2AFY-220ENST00000513268 SENP3Q9H4L4 574 aaPredicted RBP22.24■■□□□ 1.15
H2AFY-220ENST00000513268 NISCHQ9Y2I1 1504 aa22.18■■□□□ 1.14
H2AFY-220ENST00000513268 PHF23Q9BUL5 403 aaPredicted RBP21.9■■□□□ 1.1
H2AFY-220ENST00000513268 FOXD1Q16676 465 aa20.74■□□□□ 0.91
H2AFY-220ENST00000513268 CCDC180Q9P1Z9 1646 aa19.74■□□□□ 0.75
H2AFY-220ENST00000513268 POTEDQ86YR6 584 aa19.7■□□□□ 0.74
H2AFY-220ENST00000513268 MSH5O43196 834 aa19.59■□□□□ 0.73
H2AFY-220ENST00000513268 PIAS4Q8N2W9 510 aaPredicted RBP19.36■□□□□ 0.69
H2AFY-220ENST00000513268 ABCC9O60706 1549 aa19.31■□□□□ 0.68
H2AFY-220ENST00000513268 PLPPR3Q6T4P5 718 aa19.3■□□□□ 0.68
H2AFY-220ENST00000513268 PPP6R1Q9UPN7 881 aa19.11■□□□□ 0.65
H2AFY-220ENST00000513268 ADRA2BP18089 450 aa19.08■□□□□ 0.64
H2AFY-220ENST00000513268 NACADO15069 1562 aa18.64■□□□□ 0.58
H2AFY-220ENST00000513268 RB1CC1Q8TDY2 1594 aa18.64■□□□□ 0.58
H2AFY-220ENST00000513268 MYO15BQ96JP2 1530 aa18.59■□□□□ 0.57
H2AFY-220ENST00000513268 DCAF8L2P0C7V8 631 aa18.5■□□□□ 0.55
H2AFY-220ENST00000513268 DCAF1Q9Y4B6 1507 aa18.44■□□□□ 0.54
H2AFY-220ENST00000513268 ZCCHC6Q5VYS8 1495 aaKnown RBP18.44■□□□□ 0.54
H2AFY-220ENST00000513268 UNC13AQ9UPW8 1703 aa18.06■□□□□ 0.48
H2AFY-220ENST00000513268 PABPN1Q86U42 306 aaKnown RBP eCLIP18.05■□□□□ 0.48
H2AFY-220ENST00000513268 BICRAQ9NZM4 1560 aa18.01■□□□□ 0.47
H2AFY-220ENST00000513268 SHROOM4Q9ULL8 1493 aa18.01■□□□□ 0.47
H2AFY-220ENST00000513268 SCRIBQ14160 1630 aa17.87■□□□□ 0.45
H2AFY-220ENST00000513268 DNAJC5BQ9UF47 199 aa17.84■□□□□ 0.45
H2AFY-220ENST00000513268 MAPK8IP2Q13387 824 aaPredicted RBP17.63■□□□□ 0.41
H2AFY-220ENST00000513268 EIF4G1Q04637 1599 aaKnown RBP17.57■□□□□ 0.4
H2AFY-220ENST00000513268 DMRT2Q9Y5R5 561 aa17.55■□□□□ 0.4
H2AFY-220ENST00000513268 SCAF1Q9H7N4 1312 aaKnown RBP17.49■□□□□ 0.39
H2AFY-220ENST00000513268 CC2D2AQ9P2K1 1620 aa17.49■□□□□ 0.39
H2AFY-220ENST00000513268 CECR2Q9BXF3 1484 aa17.43■□□□□ 0.38
H2AFY-220ENST00000513268 NCAPD3P42695 1498 aa17.24■□□□□ 0.35
H2AFY-220ENST00000513268 BAZ1AQ9NRL2 1556 aaPredicted RBP17.2■□□□□ 0.34
H2AFY-220ENST00000513268 SMARCA4P51532 1647 aa17.17■□□□□ 0.34
H2AFY-220ENST00000513268 ATAD2BQ9ULI0 1458 aa17.17■□□□□ 0.34
H2AFY-220ENST00000513268 SMARCA2P51531 1590 aa17.15■□□□□ 0.34
H2AFY-220ENST00000513268 PEG3Q9GZU2 1588 aa17.1■□□□□ 0.33
H2AFY-220ENST00000513268 CACNB1Q02641 598 aaPredicted RBP17.09■□□□□ 0.33
H2AFY-220ENST00000513268 HMGXB3Q12766 1538 aa17.08■□□□□ 0.32
H2AFY-220ENST00000513268 MROH2BQ7Z745 1585 aa17.02■□□□□ 0.31
H2AFY-220ENST00000513268 DCAF8L1A6NGE4 600 aa17.01■□□□□ 0.31
H2AFY-220ENST00000513268 BAZ1BQ9UIG0 1483 aaKnown RBP16.99■□□□□ 0.31
H2AFY-220ENST00000513268 PPP4R3CPQ6ZMV5 832 aa16.87■□□□□ 0.29
H2AFY-220ENST00000513268 RSF1Q96T23 1441 aaPredicted RBP16.86■□□□□ 0.29
H2AFY-220ENST00000513268 WIZO95785 1651 aa16.78■□□□□ 0.28
H2AFY-220ENST00000513268 HOXD11P31277 338 aaPredicted RBP16.74■□□□□ 0.27
H2AFY-220ENST00000513268 LAMC3Q9Y6N6 1575 aa16.73■□□□□ 0.27
H2AFY-220ENST00000513268 CADPSQ9ULU8 1353 aa16.71■□□□□ 0.27
H2AFY-220ENST00000513268 ERCC6Q03468 1493 aa16.7■□□□□ 0.26
H2AFY-220ENST00000513268 TOP2AP11388 1531 aaKnown RBP16.68■□□□□ 0.26
H2AFY-220ENST00000513268 PDS5BQ9NTI5 1447 aa16.68■□□□□ 0.26
H2AFY-220ENST00000513268 NESP48681 1621 aa16.66■□□□□ 0.26
H2AFY-220ENST00000513268 RNF39Q9H2S5 420 aa16.64■□□□□ 0.25
H2AFY-220ENST00000513268 CUX2O14529 1486 aa16.64■□□□□ 0.25
H2AFY-220ENST00000513268 CNKSR2Q8WXI2 1034 aa16.63■□□□□ 0.25
H2AFY-220ENST00000513268 CFTRP13569 1480 aa16.57■□□□□ 0.24
H2AFY-220ENST00000513268 RNF216Q9NWF9 866 aaPredicted RBP16.55■□□□□ 0.24
H2AFY-220ENST00000513268 CCDC88BA6NC98 1476 aa16.5■□□□□ 0.23
H2AFY-220ENST00000513268 THOC2Q8NI27 1593 aaKnown RBP16.45■□□□□ 0.22
H2AFY-220ENST00000513268 FANCD2Q9BXW9 1451 aa16.44■□□□□ 0.22
H2AFY-220ENST00000513268 KIF21AQ7Z4S6 1674 aa16.43■□□□□ 0.22
H2AFY-220ENST00000513268 MRC2Q9UBG0 1479 aa16.43■□□□□ 0.22
H2AFY-220ENST00000513268 CEP164Q9UPV0 1460 aa16.43■□□□□ 0.22
H2AFY-220ENST00000513268 C1QBPQ07021 282 aaKnown RBP16.4■□□□□ 0.22
H2AFY-220ENST00000513268 WDR62O43379 1518 aa16.38■□□□□ 0.21
H2AFY-220ENST00000513268 PRDM2Q13029 1718 aa16.31■□□□□ 0.2
H2AFY-220ENST00000513268 ABCC8Q09428 1581 aa16.29■□□□□ 0.2
H2AFY-220ENST00000513268 SUPT5HO00267 1087 aaKnown RBP16.28■□□□□ 0.2
H2AFY-220ENST00000513268 DNAJC5Q9H3Z4 198 aa16.26■□□□□ 0.19
H2AFY-220ENST00000513268 URB2Q14146 1524 aaKnown RBP16.24■□□□□ 0.19
H2AFY-220ENST00000513268 TOPBP1Q92547 1522 aa16.16■□□□□ 0.18
H2AFY-220ENST00000513268 NCBP3Q53F19 620 aaKnown RBP16.16■□□□□ 0.18
H2AFY-220ENST00000513268 IFT140Q96RY7 1462 aa16.15■□□□□ 0.18
H2AFY-220ENST00000513268 DNMBPQ6XZF7 1577 aa16.14■□□□□ 0.17
H2AFY-220ENST00000513268 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.08■□□□□ 0.161e-8■■■□□ 16.8
H2AFY-220ENST00000513268 POLA1P09884 1462 aaPredicted RBP16.02■□□□□ 0.15
H2AFY-220ENST00000513268 SOGA1O94964 1423 aa15.99■□□□□ 0.15
H2AFY-220ENST00000513268 TARBP1Q13395 1621 aaKnown RBP15.97■□□□□ 0.15
H2AFY-220ENST00000513268 OSCARQ8IYS5 282 aa15.97■□□□□ 0.15
H2AFY-220ENST00000513268 CUX1P39880 1505 aa15.97■□□□□ 0.15
H2AFY-220ENST00000513268 ZNF608Q9ULD9 1512 aaPredicted RBP15.97■□□□□ 0.15
H2AFY-220ENST00000513268 WDR97A6NE52 1622 aa15.96■□□□□ 0.15
H2AFY-220ENST00000513268 FGD5Q6ZNL6 1462 aa15.94■□□□□ 0.14
H2AFY-220ENST00000513268 AQRO60306 1485 aaKnown RBP eCLIP15.91■□□□□ 0.143e-9■■■■■ 27.6
H2AFY-220ENST00000513268 RAD54L2Q9Y4B4 1467 aa15.91■□□□□ 0.14
H2AFY-220ENST00000513268 WRNQ14191 1432 aaPredicted RBP eCLIP15.9■□□□□ 0.14
H2AFY-220ENST00000513268 EIF4G3O43432 1585 aaKnown RBP15.88■□□□□ 0.13
H2AFY-220ENST00000513268 ABCA10Q8WWZ4 1543 aa15.86■□□□□ 0.13
H2AFY-220ENST00000513268 NPM3O75607 178 aaKnown RBP15.86■□□□□ 0.13
H2AFY-220ENST00000513268 TDRD9Q8NDG6 1382 aaKnown RBP15.86■□□□□ 0.13
H2AFY-220ENST00000513268 TOP2BQ02880 1626 aa15.85■□□□□ 0.13
H2AFY-220ENST00000513268 BIVM-ERCC5R4GMW8 1640 aa15.83■□□□□ 0.12
H2AFY-220ENST00000513268 GRIN2BQ13224 1484 aa15.82■□□□□ 0.12
H2AFY-220ENST00000513268 MAGI1Q96QZ7 1491 aaPredicted RBP15.8■□□□□ 0.12
H2AFY-220ENST00000513268 GAPVD1Q14C86 1478 aa15.79■□□□□ 0.12
H2AFY-220ENST00000513268 SYNJ1O43426 1573 aa15.76■□□□□ 0.11
H2AFY-220ENST00000513268 CHMP7Q8WUX9 453 aaPredicted RBP15.75■□□□□ 0.11
H2AFY-220ENST00000513268 SNAPC4Q5SXM2 1469 aa15.73■□□□□ 0.11
H2AFY-220ENST00000513268 ABCA5Q8WWZ7 1642 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms