RNA–Protein interactions for RNA: ENST00000513135.5

TNFRSF25-219, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 5

Gene TNFRSF25, Length 3,483 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-219ENST00000513135 NISCHQ9Y2I1 1504 aa27.59■■■□□ 2.01
TNFRSF25-219ENST00000513135 DCAF8L2P0C7V8 631 aa25■■□□□ 1.59
TNFRSF25-219ENST00000513135 SHROOM4Q9ULL8 1493 aa24.24■■□□□ 1.47
TNFRSF25-219ENST00000513135 ABCC9O60706 1549 aa23.7■■□□□ 1.38
TNFRSF25-219ENST00000513135 SUPT5HO00267 1087 aaKnown RBP23.45■■□□□ 1.34
TNFRSF25-219ENST00000513135 CCDC180Q9P1Z9 1646 aa23.32■■□□□ 1.32
TNFRSF25-219ENST00000513135 ZCCHC6Q5VYS8 1495 aaKnown RBP23■■□□□ 1.27
TNFRSF25-219ENST00000513135 PABPN1Q86U42 306 aaKnown RBP eCLIP22.88■■□□□ 1.25
TNFRSF25-219ENST00000513135 SCRIBQ14160 1630 aa22.64■■□□□ 1.21
TNFRSF25-219ENST00000513135 EHMT2Q96KQ7 1210 aa22.26■■□□□ 1.15
TNFRSF25-219ENST00000513135 RB1CC1Q8TDY2 1594 aa22.14■■□□□ 1.13
TNFRSF25-219ENST00000513135 NACADO15069 1562 aa22.1■■□□□ 1.13
TNFRSF25-219ENST00000513135 DCAF1Q9Y4B6 1507 aa22.06■■□□□ 1.12
TNFRSF25-219ENST00000513135 CECR2Q9BXF3 1484 aa21.98■■□□□ 1.11
TNFRSF25-219ENST00000513135 AEBP2Q6ZN18 517 aaPredicted RBP21.94■■□□□ 1.1
TNFRSF25-219ENST00000513135 FAM9AQ8IZU1 332 aaPredicted RBP21.93■■□□□ 1.1
TNFRSF25-219ENST00000513135 RSF1Q96T23 1441 aaPredicted RBP21.71■■□□□ 1.07
TNFRSF25-219ENST00000513135 MYO15BQ96JP2 1530 aa21.65■■□□□ 1.06
TNFRSF25-219ENST00000513135 CHIC1Q5VXU3 224 aa21.64■■□□□ 1.05
TNFRSF25-219ENST00000513135 MROH2BQ7Z745 1585 aa21.62■■□□□ 1.05
TNFRSF25-219ENST00000513135 TRIM41Q8WV44 630 aa21.59■■□□□ 1.05
TNFRSF25-219ENST00000513135 LOC105371045A0A1W2PR82 267 aa21.45■■□□□ 1.02
TNFRSF25-219ENST00000513135 UNC13AQ9UPW8 1703 aa21.42■■□□□ 1.02
TNFRSF25-219ENST00000513135 WIZO95785 1651 aa21.42■■□□□ 1.02
TNFRSF25-219ENST00000513135 RANGAP1P46060 587 aaPredicted RBP21.39■■□□□ 1.01
TNFRSF25-219ENST00000513135 BICRAQ9NZM4 1560 aa21.37■■□□□ 1.01
TNFRSF25-219ENST00000513135 DNAJC5BQ9UF47 199 aa21.28■■□□□ 1
TNFRSF25-219ENST00000513135 BAZ1AQ9NRL2 1556 aaPredicted RBP21.26■□□□□ 0.99
TNFRSF25-219ENST00000513135 TTBK1Q5TCY1 1321 aaPredicted RBP21.18■□□□□ 0.98
TNFRSF25-219ENST00000513135 SMARCA4P51532 1647 aa21.14■□□□□ 0.97
TNFRSF25-219ENST00000513135 BAZ1BQ9UIG0 1483 aaKnown RBP21.12■□□□□ 0.97
TNFRSF25-219ENST00000513135 PPARGC1BQ86YN6 1023 aaKnown RBP21.07■□□□□ 0.96
TNFRSF25-219ENST00000513135 CCDC88BA6NC98 1476 aa21.04■□□□□ 0.96
TNFRSF25-219ENST00000513135 ATAD2BQ9ULI0 1458 aa21.02■□□□□ 0.96
TNFRSF25-219ENST00000513135 EIF4G1Q04637 1599 aaKnown RBP20.98■□□□□ 0.95
TNFRSF25-219ENST00000513135 UBTFP17480 764 aaKnown RBP20.94■□□□□ 0.94
TNFRSF25-219ENST00000513135 PCGF6Q9BYE7 350 aa20.91■□□□□ 0.94
TNFRSF25-219ENST00000513135 ABCC8Q09428 1581 aa20.9■□□□□ 0.94
TNFRSF25-219ENST00000513135 HRCP23327 699 aa20.83■□□□□ 0.92
TNFRSF25-219ENST00000513135 TOP2AP11388 1531 aaKnown RBP20.82■□□□□ 0.92
TNFRSF25-219ENST00000513135 CC2D2AQ9P2K1 1620 aa20.78■□□□□ 0.92
TNFRSF25-219ENST00000513135 SMARCA2P51531 1590 aa20.76■□□□□ 0.91
TNFRSF25-219ENST00000513135 NESP48681 1621 aa20.65■□□□□ 0.9
TNFRSF25-219ENST00000513135 ATP1B4Q9UN42 357 aaPredicted RBP20.62■□□□□ 0.89
TNFRSF25-219ENST00000513135 SOGA1O94964 1423 aa20.61■□□□□ 0.89
TNFRSF25-219ENST00000513135 WRNQ14191 1432 aaPredicted RBP eCLIP20.6■□□□□ 0.89
TNFRSF25-219ENST00000513135 NCAPD3P42695 1498 aa20.59■□□□□ 0.89
TNFRSF25-219ENST00000513135 CSRNP3Q8WYN3 585 aa20.55■□□□□ 0.88
TNFRSF25-219ENST00000513135 RUSC2Q8N2Y8 1516 aa20.53■□□□□ 0.88
TNFRSF25-219ENST00000513135 FBLN2P98095 1184 aa20.52■□□□□ 0.88
TNFRSF25-219ENST00000513135 P3H3Q8IVL6 736 aa20.49■□□□□ 0.87
TNFRSF25-219ENST00000513135 CADPSQ9ULU8 1353 aa20.48■□□□□ 0.87
TNFRSF25-219ENST00000513135 PELP1Q8IZL8 1130 aaKnown RBP20.41■□□□□ 0.86
TNFRSF25-219ENST00000513135 ARID3CA6NKF2 412 aa20.36■□□□□ 0.85
TNFRSF25-219ENST00000513135 ERCC6Q03468 1493 aa20.33■□□□□ 0.84
TNFRSF25-219ENST00000513135 PEG3Q9GZU2 1588 aa20.33■□□□□ 0.84
TNFRSF25-219ENST00000513135 FANCD2Q9BXW9 1451 aa20.3■□□□□ 0.84
TNFRSF25-219ENST00000513135 TDRD9Q8NDG6 1382 aaKnown RBP20.3■□□□□ 0.84
TNFRSF25-219ENST00000513135 HMGXB3Q12766 1538 aa20.3■□□□□ 0.84
TNFRSF25-219ENST00000513135 APLP2Q06481 763 aa20.27■□□□□ 0.84
TNFRSF25-219ENST00000513135 SYNJ1O43426 1573 aa20.25■□□□□ 0.83
TNFRSF25-219ENST00000513135 CFTRP13569 1480 aa20.23■□□□□ 0.83
TNFRSF25-219ENST00000513135 RAD54L2Q9Y4B4 1467 aa20.22■□□□□ 0.83
TNFRSF25-219ENST00000513135 CUX2O14529 1486 aa20.21■□□□□ 0.83
TNFRSF25-219ENST00000513135 PDS5BQ9NTI5 1447 aa20.14■□□□□ 0.82
TNFRSF25-219ENST00000513135 ITGAEP38570 1179 aa20.13■□□□□ 0.81
TNFRSF25-219ENST00000513135 CEP164Q9UPV0 1460 aa20.12■□□□□ 0.81
TNFRSF25-219ENST00000513135 CUX1P39880 1505 aa20.11■□□□□ 0.81
TNFRSF25-219ENST00000513135 FGD5Q6ZNL6 1462 aa20.09■□□□□ 0.81
TNFRSF25-219ENST00000513135 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.09■□□□□ 0.81
TNFRSF25-219ENST00000513135 HNRNPUL2Q1KMD3 747 aaKnown RBP20.09■□□□□ 0.81
TNFRSF25-219ENST00000513135 KIF27Q86VH2 1401 aa20.05■□□□□ 0.8
TNFRSF25-219ENST00000513135 RAPGEF2Q9Y4G8 1499 aa20.03■□□□□ 0.8
TNFRSF25-219ENST00000513135 CEP162Q5TB80 1403 aa20■□□□□ 0.79
TNFRSF25-219ENST00000513135 AQRO60306 1485 aaKnown RBP eCLIP19.99■□□□□ 0.79
TNFRSF25-219ENST00000513135 CHMP7Q8WUX9 453 aaPredicted RBP19.99■□□□□ 0.79
TNFRSF25-219ENST00000513135 SCAF1Q9H7N4 1312 aaKnown RBP19.96■□□□□ 0.79
TNFRSF25-219ENST00000513135 CARMIL1Q5VZK9 1371 aa19.95■□□□□ 0.78
TNFRSF25-219ENST00000513135 TOPBP1Q92547 1522 aa19.92■□□□□ 0.78
TNFRSF25-219ENST00000513135 GOLGA3Q08378 1498 aa19.91■□□□□ 0.78
TNFRSF25-219ENST00000513135 TRIM26Q12899 539 aaPredicted RBP19.91■□□□□ 0.78
TNFRSF25-219ENST00000513135 CLIP1P30622 1438 aa19.91■□□□□ 0.78
TNFRSF25-219ENST00000513135 POLA1P09884 1462 aaPredicted RBP19.9■□□□□ 0.78
TNFRSF25-219ENST00000513135 URB2Q14146 1524 aaKnown RBP19.9■□□□□ 0.78
TNFRSF25-219ENST00000513135 IGF1RP08069 1367 aa19.88■□□□□ 0.77
TNFRSF25-219ENST00000513135 TOP2BQ02880 1626 aa19.86■□□□□ 0.77
TNFRSF25-219ENST00000513135 EEA1Q15075 1411 aa19.82■□□□□ 0.76
TNFRSF25-219ENST00000513135 TNIKQ9UKE5 1360 aa19.81■□□□□ 0.76
TNFRSF25-219ENST00000513135 KIF21AQ7Z4S6 1674 aa19.79■□□□□ 0.76
TNFRSF25-219ENST00000513135 LAMC3Q9Y6N6 1575 aa19.79■□□□□ 0.76
TNFRSF25-219ENST00000513135 ZNF608Q9ULD9 1512 aaPredicted RBP19.78■□□□□ 0.76
TNFRSF25-219ENST00000513135 FAM50AQ14320 339 aaKnown RBP19.73■□□□□ 0.75
TNFRSF25-219ENST00000513135 GAPVD1Q14C86 1478 aa19.73■□□□□ 0.75
TNFRSF25-219ENST00000513135 CCER1Q8TC90 406 aaPredicted RBP19.71■□□□□ 0.75
TNFRSF25-219ENST00000513135 MRC2Q9UBG0 1479 aa19.71■□□□□ 0.75
TNFRSF25-219ENST00000513135 KANK4Q5T7N3 995 aaPredicted RBP19.71■□□□□ 0.75
TNFRSF25-219ENST00000513135 DNMBPQ6XZF7 1577 aa19.69■□□□□ 0.74
TNFRSF25-219ENST00000513135 MYT1Q01538 1121 aa19.67■□□□□ 0.74
TNFRSF25-219ENST00000513135 FHOD3Q2V2M9 1422 aa19.65■□□□□ 0.74
TNFRSF25-219ENST00000513135 BIVM-ERCC5R4GMW8 1640 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms