RNA–Protein interactions for RNA: ENST00000511677.1

AP003716.1-202, humanhuman

TSL 2 BASIC

Gene AP003716.1, Length 3,387 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003716.1-202ENST00000511677 NISCHQ9Y2I1 1504 aa21.35■■□□□ 1.01
AP003716.1-202ENST00000511677 CCDC180Q9P1Z9 1646 aa18.54■□□□□ 0.56
AP003716.1-202ENST00000511677 ZCCHC6Q5VYS8 1495 aaKnown RBP18.16■□□□□ 0.5
AP003716.1-202ENST00000511677 DCAF1Q9Y4B6 1507 aa17.84■□□□□ 0.45
AP003716.1-202ENST00000511677 MYO15BQ96JP2 1530 aa17.39■□□□□ 0.37
AP003716.1-202ENST00000511677 SHROOM4Q9ULL8 1493 aa17.36■□□□□ 0.37
AP003716.1-202ENST00000511677 ABCC9O60706 1549 aa17.19■□□□□ 0.34
AP003716.1-202ENST00000511677 NACADO15069 1562 aa16.9■□□□□ 0.3
AP003716.1-202ENST00000511677 SUPT5HO00267 1087 aaKnown RBP16.88■□□□□ 0.29
AP003716.1-202ENST00000511677 SCRIBQ14160 1630 aa16.84■□□□□ 0.29
AP003716.1-202ENST00000511677 CHIC1Q5VXU3 224 aa16.82■□□□□ 0.28
AP003716.1-202ENST00000511677 RSF1Q96T23 1441 aaPredicted RBP16.74■□□□□ 0.27
AP003716.1-202ENST00000511677 RB1CC1Q8TDY2 1594 aa16.71■□□□□ 0.27
AP003716.1-202ENST00000511677 EIF4G1Q04637 1599 aaKnown RBP16.66■□□□□ 0.26
AP003716.1-202ENST00000511677 UNC13AQ9UPW8 1703 aa16.65■□□□□ 0.26
AP003716.1-202ENST00000511677 BAZ1AQ9NRL2 1556 aaPredicted RBP16.54■□□□□ 0.24
AP003716.1-202ENST00000511677 DCAF8L2P0C7V8 631 aa16.52■□□□□ 0.23
AP003716.1-202ENST00000511677 MROH2BQ7Z745 1585 aa16.51■□□□□ 0.23
AP003716.1-202ENST00000511677 WIZO95785 1651 aa16.47■□□□□ 0.23
AP003716.1-202ENST00000511677 CECR2Q9BXF3 1484 aa16.46■□□□□ 0.23
AP003716.1-202ENST00000511677 SMARCA4P51532 1647 aa16.34■□□□□ 0.21
AP003716.1-202ENST00000511677 TOP2AP11388 1531 aaKnown RBP16.3■□□□□ 0.2
AP003716.1-202ENST00000511677 BICRAQ9NZM4 1560 aa16.28■□□□□ 0.2
AP003716.1-202ENST00000511677 PEG3Q9GZU2 1588 aa16.28■□□□□ 0.2
AP003716.1-202ENST00000511677 SMARCA2P51531 1590 aa16.21■□□□□ 0.19
AP003716.1-202ENST00000511677 HRCP23327 699 aa16.19■□□□□ 0.18
AP003716.1-202ENST00000511677 LOC105371045A0A1W2PR82 267 aa16.06■□□□□ 0.16
AP003716.1-202ENST00000511677 CCDC88BA6NC98 1476 aa16.03■□□□□ 0.16
AP003716.1-202ENST00000511677 ABCC8Q09428 1581 aa15.91■□□□□ 0.14
AP003716.1-202ENST00000511677 PCGF6Q9BYE7 350 aa15.88■□□□□ 0.13
AP003716.1-202ENST00000511677 TRIM41Q8WV44 630 aa15.87■□□□□ 0.13
AP003716.1-202ENST00000511677 TRIM26Q12899 539 aaPredicted RBP15.86■□□□□ 0.13
AP003716.1-202ENST00000511677 WRNQ14191 1432 aaPredicted RBP eCLIP15.83■□□□□ 0.13
AP003716.1-202ENST00000511677 SYNJ1O43426 1573 aa15.77■□□□□ 0.12
AP003716.1-202ENST00000511677 KIF21BO75037 1637 aa15.77■□□□□ 0.12
AP003716.1-202ENST00000511677 ATAD2BQ9ULI0 1458 aa15.77■□□□□ 0.11
AP003716.1-202ENST00000511677 EEA1Q15075 1411 aa15.76■□□□□ 0.11
AP003716.1-202ENST00000511677 BIVM-ERCC5R4GMW8 1640 aa15.76■□□□□ 0.11
AP003716.1-202ENST00000511677 PRDM2Q13029 1718 aa15.73■□□□□ 0.11
AP003716.1-202ENST00000511677 HMGXB3Q12766 1538 aa15.71■□□□□ 0.11
AP003716.1-202ENST00000511677 TOP2BQ02880 1626 aa15.67■□□□□ 0.1
AP003716.1-202ENST00000511677 SOGA1O94964 1423 aa15.65■□□□□ 0.1
AP003716.1-202ENST00000511677 RUSC2Q8N2Y8 1516 aa15.64■□□□□ 0.09
AP003716.1-202ENST00000511677 TNIKQ9UKE5 1360 aa15.64■□□□□ 0.09
AP003716.1-202ENST00000511677 PPARGC1BQ86YN6 1023 aaKnown RBP15.61■□□□□ 0.09
AP003716.1-202ENST00000511677 BAZ1BQ9UIG0 1483 aaKnown RBP15.59■□□□□ 0.09
AP003716.1-202ENST00000511677 CEP162Q5TB80 1403 aa15.58■□□□□ 0.08
AP003716.1-202ENST00000511677 GOLGA3Q08378 1498 aa15.55■□□□□ 0.08
AP003716.1-202ENST00000511677 NCAPD3P42695 1498 aa15.55■□□□□ 0.08
AP003716.1-202ENST00000511677 ERICH3Q5RHP9 1530 aa15.49■□□□□ 0.07
AP003716.1-202ENST00000511677 CEP164Q9UPV0 1460 aa15.49■□□□□ 0.07
AP003716.1-202ENST00000511677 ZEB1P37275 1124 aaPredicted RBP15.47■□□□□ 0.07
AP003716.1-202ENST00000511677 FAM9AQ8IZU1 332 aaPredicted RBP15.47■□□□□ 0.07
AP003716.1-202ENST00000511677 CUX1P39880 1505 aa15.41■□□□□ 0.06
AP003716.1-202ENST00000511677 PABPN1Q86U42 306 aaKnown RBP eCLIP15.41■□□□□ 0.06
AP003716.1-202ENST00000511677 PRXQ9BXM0 1461 aa15.4■□□□□ 0.06
AP003716.1-202ENST00000511677 CFTRP13569 1480 aa15.39■□□□□ 0.05
AP003716.1-202ENST00000511677 CSRNP3Q8WYN3 585 aa15.38■□□□□ 0.05
AP003716.1-202ENST00000511677 RAPGEF2Q9Y4G8 1499 aa15.34■□□□□ 0.05
AP003716.1-202ENST00000511677 VPS8Q8N3P4 1428 aa15.31■□□□□ 0.04
AP003716.1-202ENST00000511677 ARAP1Q96P48 1450 aa15.27■□□□□ 0.03
AP003716.1-202ENST00000511677 CLIP1P30622 1438 aa15.26■□□□□ 0.03
AP003716.1-202ENST00000511677 WDR97A6NE52 1622 aa15.21■□□□□ 0.03
AP003716.1-202ENST00000511677 CUX2O14529 1486 aa15.16■□□□□ 0.02
AP003716.1-202ENST00000511677 MAP3K1Q13233 1512 aa15.14■□□□□ 0.01
AP003716.1-202ENST00000511677 CC2D2AQ9P2K1 1620 aa15.13■□□□□ 0.01
AP003716.1-202ENST00000511677 CFAP43Q8NDM7 1665 aa15.12■□□□□ 0.01
AP003716.1-202ENST00000511677 EHMT2Q96KQ7 1210 aa15.08■□□□□ 0.01
AP003716.1-202ENST00000511677 ARHGAP35Q9NRY4 1499 aa15.08■□□□□ 0.01
AP003716.1-202ENST00000511677 KIF27Q86VH2 1401 aa15.08■□□□□ 0
AP003716.1-202ENST00000511677 RRBP1Q9P2E9 1410 aaKnown RBP15.07■□□□□ 0
AP003716.1-202ENST00000511677 DNMBPQ6XZF7 1577 aa15.06■□□□□ 0
AP003716.1-202ENST00000511677 CTTNBP2Q8WZ74 1663 aa15.04■□□□□ -0
AP003716.1-202ENST00000511677 CADPSQ9ULU8 1353 aa15.03■□□□□ -0
AP003716.1-202ENST00000511677 CUL7Q14999 1698 aa15.02□□□□□ -0.01
AP003716.1-202ENST00000511677 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.01□□□□□ -0.01
AP003716.1-202ENST00000511677 FGD5Q6ZNL6 1462 aa15.01□□□□□ -0.01
AP003716.1-202ENST00000511677 TIAM1Q13009 1591 aa15.01□□□□□ -0.01
AP003716.1-202ENST00000511677 ABCA10Q8WWZ4 1543 aa14.99□□□□□ -0.01
AP003716.1-202ENST00000511677 ABCA5Q8WWZ7 1642 aa14.99□□□□□ -0.01
AP003716.1-202ENST00000511677 UBTFP17480 764 aaKnown RBP14.98□□□□□ -0.01
AP003716.1-202ENST00000511677 IGF1RP08069 1367 aa14.97□□□□□ -0.01
AP003716.1-202ENST00000511677 LRRIQ1Q96JM4 1722 aa14.97□□□□□ -0.01
AP003716.1-202ENST00000511677 LAMC3Q9Y6N6 1575 aa14.95□□□□□ -0.02
AP003716.1-202ENST00000511677 SAMD9Q5K651 1589 aa14.92□□□□□ -0.02
AP003716.1-202ENST00000511677 TOPBP1Q92547 1522 aa14.91□□□□□ -0.02
AP003716.1-202ENST00000511677 KIF21AQ7Z4S6 1674 aa14.91□□□□□ -0.02
AP003716.1-202ENST00000511677 EFCAB5A4FU69 1503 aa14.91□□□□□ -0.02
AP003716.1-202ENST00000511677 PCF11O94913 1555 aaKnown RBP14.91□□□□□ -0.02
AP003716.1-202ENST00000511677 FANCD2Q9BXW9 1451 aa14.91□□□□□ -0.02
AP003716.1-202ENST00000511677 AQRO60306 1485 aaKnown RBP eCLIP14.89□□□□□ -0.03
AP003716.1-202ENST00000511677 CCER1Q8TC90 406 aaPredicted RBP14.88□□□□□ -0.03
AP003716.1-202ENST00000511677 POLA1P09884 1462 aaPredicted RBP14.88□□□□□ -0.03
AP003716.1-202ENST00000511677 CLSPNQ9HAW4 1339 aa14.88□□□□□ -0.03
AP003716.1-202ENST00000511677 DHX57Q6P158 1386 aaKnown RBP14.86□□□□□ -0.03
AP003716.1-202ENST00000511677 TARBP1Q13395 1621 aaKnown RBP14.85□□□□□ -0.03
AP003716.1-202ENST00000511677 URB2Q14146 1524 aaKnown RBP14.83□□□□□ -0.04
AP003716.1-202ENST00000511677 MAPKBP1O60336 1514 aa14.83□□□□□ -0.04
AP003716.1-202ENST00000511677 SCAF1Q9H7N4 1312 aaKnown RBP14.82□□□□□ -0.04
AP003716.1-202ENST00000511677 LRRC9Q6ZRR7 1453 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms