RNA–Protein interactions for RNA: ENST00000509478.5

FAM13A-214, Transcript of family with sequence similarity 13 member A, humanhuman

TSL 2

Gene FAM13A, Length 2,286 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM13A-214ENST00000509478 NISCHQ9Y2I1 1504 aa20.62■□□□□ 0.89
FAM13A-214ENST00000509478 CCDC180Q9P1Z9 1646 aa17.8■□□□□ 0.44
FAM13A-214ENST00000509478 ZCCHC6Q5VYS8 1495 aaKnown RBP17.42■□□□□ 0.38
FAM13A-214ENST00000509478 DCAF1Q9Y4B6 1507 aa17.12■□□□□ 0.33
FAM13A-214ENST00000509478 SHROOM4Q9ULL8 1493 aa17.02■□□□□ 0.32
FAM13A-214ENST00000509478 DCAF8L2P0C7V8 631 aa16.79■□□□□ 0.28
FAM13A-214ENST00000509478 MYO15BQ96JP2 1530 aa16.77■□□□□ 0.27
FAM13A-214ENST00000509478 SUPT5HO00267 1087 aaKnown RBP16.64■□□□□ 0.25
FAM13A-214ENST00000509478 NACADO15069 1562 aa16.47■□□□□ 0.23
FAM13A-214ENST00000509478 ABCC9O60706 1549 aa16.38■□□□□ 0.21
FAM13A-214ENST00000509478 SCRIBQ14160 1630 aa16.34■□□□□ 0.21
FAM13A-214ENST00000509478 CHIC1Q5VXU3 224 aa16.22■□□□□ 0.19
FAM13A-214ENST00000509478 RB1CC1Q8TDY2 1594 aa16.2■□□□□ 0.18
FAM13A-214ENST00000509478 PELP1Q8IZL8 1130 aaKnown RBP16.16■□□□□ 0.18
FAM13A-214ENST00000509478 RSF1Q96T23 1441 aaPredicted RBP16.16■□□□□ 0.18
FAM13A-214ENST00000509478 MYT1Q01538 1121 aa16.06■□□□□ 0.16
FAM13A-214ENST00000509478 CECR2Q9BXF3 1484 aa15.93■□□□□ 0.14
FAM13A-214ENST00000509478 MROH2BQ7Z745 1585 aa15.91■□□□□ 0.14
FAM13A-214ENST00000509478 BAZ1AQ9NRL2 1556 aaPredicted RBP15.91■□□□□ 0.14
FAM13A-214ENST00000509478 UNC13AQ9UPW8 1703 aa15.84■□□□□ 0.13
FAM13A-214ENST00000509478 WIZO95785 1651 aa15.79■□□□□ 0.12
FAM13A-214ENST00000509478 SMARCA4P51532 1647 aa15.74■□□□□ 0.11
FAM13A-214ENST00000509478 TOP2AP11388 1531 aaKnown RBP15.69■□□□□ 0.1
FAM13A-214ENST00000509478 HRCP23327 699 aa15.68■□□□□ 0.1
FAM13A-214ENST00000509478 TRIM41Q8WV44 630 aa15.68■□□□□ 0.1
FAM13A-214ENST00000509478 BICRAQ9NZM4 1560 aa15.67■□□□□ 0.1
FAM13A-214ENST00000509478 EIF4G1Q04637 1599 aaKnown RBP15.6■□□□□ 0.09
FAM13A-214ENST00000509478 TTBK1Q5TCY1 1321 aaPredicted RBP15.59■□□□□ 0.09
FAM13A-214ENST00000509478 PEG3Q9GZU2 1588 aa15.58■□□□□ 0.08
FAM13A-214ENST00000509478 LOC105371045A0A1W2PR82 267 aa15.56■□□□□ 0.08
FAM13A-214ENST00000509478 SMARCA2P51531 1590 aa15.54■□□□□ 0.08
FAM13A-214ENST00000509478 PCGF6Q9BYE7 350 aa15.52■□□□□ 0.08
FAM13A-214ENST00000509478 CCDC88BA6NC98 1476 aa15.51■□□□□ 0.07
FAM13A-214ENST00000509478 PABPN1Q86U42 306 aaKnown RBP eCLIP15.46■□□□□ 0.07
FAM13A-214ENST00000509478 PPARGC1BQ86YN6 1023 aaKnown RBP15.45■□□□□ 0.06
FAM13A-214ENST00000509478 ATAD2BQ9ULI0 1458 aa15.37■□□□□ 0.05
FAM13A-214ENST00000509478 TRIM26Q12899 539 aaPredicted RBP15.32■□□□□ 0.04
FAM13A-214ENST00000509478 BAZ1BQ9UIG0 1483 aaKnown RBP15.31■□□□□ 0.04
FAM13A-214ENST00000509478 FAM9AQ8IZU1 332 aaPredicted RBP15.31■□□□□ 0.04
FAM13A-214ENST00000509478 EEA1Q15075 1411 aa15.3■□□□□ 0.04
FAM13A-214ENST00000509478 ABCC8Q09428 1581 aa15.29■□□□□ 0.04
FAM13A-214ENST00000509478 SLC24A1O60721 1099 aa15.27■□□□□ 0.03
FAM13A-214ENST00000509478 HMGXB3Q12766 1538 aa15.21■□□□□ 0.03
FAM13A-214ENST00000509478 WRNQ14191 1432 aaPredicted RBP eCLIP15.21■□□□□ 0.03
FAM13A-214ENST00000509478 NCAPD3P42695 1498 aa15.2■□□□□ 0.02
FAM13A-214ENST00000509478 PRKCSHP14314 528 aaPredicted RBP15.17■□□□□ 0.02
FAM13A-214ENST00000509478 SOGA1O94964 1423 aa15.12■□□□□ 0.01
FAM13A-214ENST00000509478 TNIKQ9UKE5 1360 aa15.11■□□□□ 0.01
FAM13A-214ENST00000509478 CSRNP3Q8WYN3 585 aa15.11■□□□□ 0.01
FAM13A-214ENST00000509478 SYNJ1O43426 1573 aa15.09■□□□□ 0.01
FAM13A-214ENST00000509478 GOLGA3Q08378 1498 aa15.06■□□□□ 0
FAM13A-214ENST00000509478 TOP2BQ02880 1626 aa15.03■□□□□ -0
FAM13A-214ENST00000509478 KIF21BO75037 1637 aa15.03■□□□□ -0
FAM13A-214ENST00000509478 CEP162Q5TB80 1403 aa15.02■□□□□ -0
FAM13A-214ENST00000509478 ZEB1P37275 1124 aaPredicted RBP15.02□□□□□ -0.01
FAM13A-214ENST00000509478 CEP164Q9UPV0 1460 aa15.02□□□□□ -0.01
FAM13A-214ENST00000509478 EHMT2Q96KQ7 1210 aa15.01□□□□□ -0.01
FAM13A-214ENST00000509478 RUSC2Q8N2Y8 1516 aa15.01□□□□□ -0.01
FAM13A-214ENST00000509478 BIVM-ERCC5R4GMW8 1640 aa15.01□□□□□ -0.01
FAM13A-214ENST00000509478 CFTRP13569 1480 aa14.97□□□□□ -0.01
FAM13A-214ENST00000509478 ERICH6Q7L0X2 663 aa14.94□□□□□ -0.02
FAM13A-214ENST00000509478 APLP2Q06481 763 aa14.93□□□□□ -0.02
FAM13A-214ENST00000509478 PRDM2Q13029 1718 aa14.93□□□□□ -0.02
FAM13A-214ENST00000509478 UBTFP17480 764 aaKnown RBP14.92□□□□□ -0.02
FAM13A-214ENST00000509478 ERICH3Q5RHP9 1530 aa14.86□□□□□ -0.03
FAM13A-214ENST00000509478 CUX1P39880 1505 aa14.85□□□□□ -0.03
FAM13A-214ENST00000509478 CADPSQ9ULU8 1353 aa14.83□□□□□ -0.04
FAM13A-214ENST00000509478 PRXQ9BXM0 1461 aa14.81□□□□□ -0.04
FAM13A-214ENST00000509478 CLIP1P30622 1438 aa14.81□□□□□ -0.04
FAM13A-214ENST00000509478 CC2D2AQ9P2K1 1620 aa14.81□□□□□ -0.04
FAM13A-214ENST00000509478 RAPGEF2Q9Y4G8 1499 aa14.8□□□□□ -0.04
FAM13A-214ENST00000509478 KIF27Q86VH2 1401 aa14.8□□□□□ -0.04
FAM13A-214ENST00000509478 VPS8Q8N3P4 1428 aa14.77□□□□□ -0.05
FAM13A-214ENST00000509478 SCAF1Q9H7N4 1312 aaKnown RBP14.73□□□□□ -0.05
FAM13A-214ENST00000509478 FANCD2Q9BXW9 1451 aa14.64□□□□□ -0.07
FAM13A-214ENST00000509478 FGD5Q6ZNL6 1462 aa14.62□□□□□ -0.07
FAM13A-214ENST00000509478 CUX2O14529 1486 aa14.62□□□□□ -0.07
FAM13A-214ENST00000509478 DNMBPQ6XZF7 1577 aa14.61□□□□□ -0.07
FAM13A-214ENST00000509478 LAMC3Q9Y6N6 1575 aa14.6□□□□□ -0.07
FAM13A-214ENST00000509478 CCER1Q8TC90 406 aaPredicted RBP14.6□□□□□ -0.07
FAM13A-214ENST00000509478 IGF1RP08069 1367 aa14.6□□□□□ -0.07
FAM13A-214ENST00000509478 ARAP1Q96P48 1450 aa14.59□□□□□ -0.07
FAM13A-214ENST00000509478 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.55□□□□□ -0.08
FAM13A-214ENST00000509478 ABCA10Q8WWZ4 1543 aa14.54□□□□□ -0.08
FAM13A-214ENST00000509478 CARMIL1Q5VZK9 1371 aa14.54□□□□□ -0.08
FAM13A-214ENST00000509478 TOPBP1Q92547 1522 aa14.53□□□□□ -0.08
FAM13A-214ENST00000509478 BCL11AQ9H165 835 aa14.53□□□□□ -0.08
FAM13A-214ENST00000509478 DAXXQ9UER7 740 aaPredicted RBP14.53□□□□□ -0.08
FAM13A-214ENST00000509478 ARHGAP35Q9NRY4 1499 aa14.51□□□□□ -0.09
FAM13A-214ENST00000509478 POLA1P09884 1462 aaPredicted RBP14.49□□□□□ -0.09
FAM13A-214ENST00000509478 MAP3K1Q13233 1512 aa14.49□□□□□ -0.09
FAM13A-214ENST00000509478 PDS5BQ9NTI5 1447 aa14.48□□□□□ -0.09
FAM13A-214ENST00000509478 CUL7Q14999 1698 aa14.47□□□□□ -0.09
FAM13A-214ENST00000509478 NESP48681 1621 aa14.46□□□□□ -0.09
FAM13A-214ENST00000509478 RANGAP1P46060 587 aaPredicted RBP14.44□□□□□ -0.1
FAM13A-214ENST00000509478 WDR97A6NE52 1622 aa14.43□□□□□ -0.1
FAM13A-214ENST00000509478 FHAD1B1AJZ9 1412 aa14.42□□□□□ -0.1
FAM13A-214ENST00000509478 RRBP1Q9P2E9 1410 aaKnown RBP14.42□□□□□ -0.1
FAM13A-214ENST00000509478 NEUROD1Q13562 356 aa14.41□□□□□ -0.1
FAM13A-214ENST00000509478 URB2Q14146 1524 aaKnown RBP14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms