RNA–Protein interactions for RNA: ENST00000508898.5

PALLD-210, Transcript of palladin, cytoskeletal associated protein, humanhuman

TSL 2

Gene PALLD, Length 2,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALLD-210ENST00000508898 NISCHQ9Y2I1 1504 aa31.16■■■□□ 2.58
PALLD-210ENST00000508898 CCDC180Q9P1Z9 1646 aa27.25■■□□□ 1.95
PALLD-210ENST00000508898 ZCCHC6Q5VYS8 1495 aaKnown RBP26.15■■□□□ 1.78
PALLD-210ENST00000508898 ABCC9O60706 1549 aa25.96■■□□□ 1.75
PALLD-210ENST00000508898 DCAF1Q9Y4B6 1507 aa25.74■■□□□ 1.71
PALLD-210ENST00000508898 DCAF8L2P0C7V8 631 aa25.71■■□□□ 1.71
PALLD-210ENST00000508898 MYO15BQ96JP2 1530 aa25.5■■□□□ 1.67
PALLD-210ENST00000508898 NACADO15069 1562 aa25.4■■□□□ 1.66
PALLD-210ENST00000508898 SHROOM4Q9ULL8 1493 aa25.28■■□□□ 1.64
PALLD-210ENST00000508898 RB1CC1Q8TDY2 1594 aa25.23■■□□□ 1.63
PALLD-210ENST00000508898 SCRIBQ14160 1630 aa25.07■■□□□ 1.6
PALLD-210ENST00000508898 UNC13AQ9UPW8 1703 aa24.83■■□□□ 1.57
PALLD-210ENST00000508898 BICRAQ9NZM4 1560 aa24.57■■□□□ 1.52
PALLD-210ENST00000508898 PABPN1Q86U42 306 aaKnown RBP eCLIP24.43■■□□□ 1.5
PALLD-210ENST00000508898 CECR2Q9BXF3 1484 aa24.27■■□□□ 1.48
PALLD-210ENST00000508898 SUPT5HO00267 1087 aaKnown RBP24.17■■□□□ 1.46
PALLD-210ENST00000508898 RSF1Q96T23 1441 aaPredicted RBP24.1■■□□□ 1.45
PALLD-210ENST00000508898 MROH2BQ7Z745 1585 aa24.1■■□□□ 1.45
PALLD-210ENST00000508898 BAZ1AQ9NRL2 1556 aaPredicted RBP24.05■■□□□ 1.44
PALLD-210ENST00000508898 SMARCA4P51532 1647 aa24.01■■□□□ 1.43
PALLD-210ENST00000508898 WIZO95785 1651 aa23.9■■□□□ 1.42
PALLD-210ENST00000508898 EIF4G1Q04637 1599 aaKnown RBP23.8■■□□□ 1.4
PALLD-210ENST00000508898 PEG3Q9GZU2 1588 aa23.72■■□□□ 1.39
PALLD-210ENST00000508898 ATAD2BQ9ULI0 1458 aa23.65■■□□□ 1.38
PALLD-210ENST00000508898 TOP2AP11388 1531 aaKnown RBP23.6■■□□□ 1.37
PALLD-210ENST00000508898 SMARCA2P51531 1590 aa23.59■■□□□ 1.37
PALLD-210ENST00000508898 CC2D2AQ9P2K1 1620 aa23.51■■□□□ 1.35
PALLD-210ENST00000508898 BAZ1BQ9UIG0 1483 aaKnown RBP23.48■■□□□ 1.35
PALLD-210ENST00000508898 NCAPD3P42695 1498 aa23.46■■□□□ 1.35
PALLD-210ENST00000508898 HMGXB3Q12766 1538 aa23.42■■□□□ 1.34
PALLD-210ENST00000508898 CCDC88BA6NC98 1476 aa23.36■■□□□ 1.33
PALLD-210ENST00000508898 PELP1Q8IZL8 1130 aaKnown RBP23.16■■□□□ 1.3
PALLD-210ENST00000508898 DNAJC5BQ9UF47 199 aa23.12■■□□□ 1.29
PALLD-210ENST00000508898 MYT1Q01538 1121 aa23.11■■□□□ 1.29
PALLD-210ENST00000508898 CHIC1Q5VXU3 224 aa23.06■■□□□ 1.28
PALLD-210ENST00000508898 CFTRP13569 1480 aa22.9■■□□□ 1.26
PALLD-210ENST00000508898 ABCC8Q09428 1581 aa22.85■■□□□ 1.25
PALLD-210ENST00000508898 CADPSQ9ULU8 1353 aa22.83■■□□□ 1.24
PALLD-210ENST00000508898 PRDM2Q13029 1718 aa22.79■■□□□ 1.24
PALLD-210ENST00000508898 NESP48681 1621 aa22.77■■□□□ 1.24
PALLD-210ENST00000508898 TRIM41Q8WV44 630 aa22.71■■□□□ 1.23
PALLD-210ENST00000508898 LAMC3Q9Y6N6 1575 aa22.69■■□□□ 1.22
PALLD-210ENST00000508898 WRNQ14191 1432 aaPredicted RBP eCLIP22.66■■□□□ 1.22
PALLD-210ENST00000508898 SYNJ1O43426 1573 aa22.65■■□□□ 1.22
PALLD-210ENST00000508898 FANCD2Q9BXW9 1451 aa22.6■■□□□ 1.21
PALLD-210ENST00000508898 CUX1P39880 1505 aa22.54■■□□□ 1.2
PALLD-210ENST00000508898 TOP2BQ02880 1626 aa22.53■■□□□ 1.2
PALLD-210ENST00000508898 BIVM-ERCC5R4GMW8 1640 aa22.52■■□□□ 1.2
PALLD-210ENST00000508898 KIF21AQ7Z4S6 1674 aa22.5■■□□□ 1.19
PALLD-210ENST00000508898 TTBK1Q5TCY1 1321 aaPredicted RBP22.47■■□□□ 1.19
PALLD-210ENST00000508898 PDS5BQ9NTI5 1447 aa22.47■■□□□ 1.19
PALLD-210ENST00000508898 CEP164Q9UPV0 1460 aa22.45■■□□□ 1.19
PALLD-210ENST00000508898 URB2Q14146 1524 aaKnown RBP22.37■■□□□ 1.17
PALLD-210ENST00000508898 DNMBPQ6XZF7 1577 aa22.36■■□□□ 1.17
PALLD-210ENST00000508898 SOGA1O94964 1423 aa22.36■■□□□ 1.17
PALLD-210ENST00000508898 TOPBP1Q92547 1522 aa22.35■■□□□ 1.17
PALLD-210ENST00000508898 FAM9AQ8IZU1 332 aaPredicted RBP22.33■■□□□ 1.17
PALLD-210ENST00000508898 RUSC2Q8N2Y8 1516 aa22.32■■□□□ 1.16
PALLD-210ENST00000508898 FGD5Q6ZNL6 1462 aa22.3■■□□□ 1.16
PALLD-210ENST00000508898 POLA1P09884 1462 aaPredicted RBP22.24■■□□□ 1.15
PALLD-210ENST00000508898 MRC2Q9UBG0 1479 aa22.24■■□□□ 1.15
PALLD-210ENST00000508898 ERCC6Q03468 1493 aa22.22■■□□□ 1.15
PALLD-210ENST00000508898 LOC105371045A0A1W2PR82 267 aa22.19■■□□□ 1.14
PALLD-210ENST00000508898 THOC2Q8NI27 1593 aaKnown RBP22.18■■□□□ 1.14
PALLD-210ENST00000508898 EEA1Q15075 1411 aa22.17■■□□□ 1.14
PALLD-210ENST00000508898 WDR62O43379 1518 aa22.17■■□□□ 1.14
PALLD-210ENST00000508898 RAD54L2Q9Y4B4 1467 aa22.17■■□□□ 1.14
PALLD-210ENST00000508898 WDR97A6NE52 1622 aa22.09■■□□□ 1.13
PALLD-210ENST00000508898 CUX2O14529 1486 aa22.09■■□□□ 1.13
PALLD-210ENST00000508898 ABCA10Q8WWZ4 1543 aa22.09■■□□□ 1.13
PALLD-210ENST00000508898 CSRNP3Q8WYN3 585 aa22.08■■□□□ 1.13
PALLD-210ENST00000508898 KIF27Q86VH2 1401 aa22.07■■□□□ 1.12
PALLD-210ENST00000508898 TARBP1Q13395 1621 aaKnown RBP22.06■■□□□ 1.12
PALLD-210ENST00000508898 EHMT2Q96KQ7 1210 aa22.05■■□□□ 1.12
PALLD-210ENST00000508898 KIF21BO75037 1637 aa21.97■■□□□ 1.11
PALLD-210ENST00000508898 ABCA5Q8WWZ7 1642 aa21.97■■□□□ 1.11
PALLD-210ENST00000508898 TDRD9Q8NDG6 1382 aaKnown RBP21.94■■□□□ 1.1
PALLD-210ENST00000508898 IGF1RP08069 1367 aa21.94■■□□□ 1.1
PALLD-210ENST00000508898 PRXQ9BXM0 1461 aa21.93■■□□□ 1.1
PALLD-210ENST00000508898 IFT140Q96RY7 1462 aa21.92■■□□□ 1.1
PALLD-210ENST00000508898 RAPGEF2Q9Y4G8 1499 aa21.91■■□□□ 1.1
PALLD-210ENST00000508898 AEBP2Q6ZN18 517 aaPredicted RBP21.9■■□□□ 1.1
PALLD-210ENST00000508898 GOLGA3Q08378 1498 aa21.9■■□□□ 1.1
PALLD-210ENST00000508898 ZNF608Q9ULD9 1512 aaPredicted RBP21.89■■□□□ 1.09
PALLD-210ENST00000508898 GAPVD1Q14C86 1478 aa21.88■■□□□ 1.09
PALLD-210ENST00000508898 AQRO60306 1485 aaKnown RBP eCLIP21.85■■□□□ 1.09
PALLD-210ENST00000508898 ERICH3Q5RHP9 1530 aa21.85■■□□□ 1.09
PALLD-210ENST00000508898 PBRM1Q86U86 1689 aa21.81■■□□□ 1.08
PALLD-210ENST00000508898 EIF4G3O43432 1585 aaKnown RBP21.8■■□□□ 1.08
PALLD-210ENST00000508898 CARMIL1Q5VZK9 1371 aa21.79■■□□□ 1.08
PALLD-210ENST00000508898 TNIKQ9UKE5 1360 aa21.78■■□□□ 1.08
PALLD-210ENST00000508898 CUL7Q14999 1698 aa21.78■■□□□ 1.08
PALLD-210ENST00000508898 UBTFP17480 764 aaKnown RBP21.76■■□□□ 1.07
PALLD-210ENST00000508898 SLC24A1O60721 1099 aa21.73■■□□□ 1.07
PALLD-210ENST00000508898 GRIN2BQ13224 1484 aa21.72■■□□□ 1.07
PALLD-210ENST00000508898 CEP162Q5TB80 1403 aa21.69■■□□□ 1.06
PALLD-210ENST00000508898 ADAMTS12P58397 1594 aa21.68■■□□□ 1.06
PALLD-210ENST00000508898 SNAPC4Q5SXM2 1469 aa21.63■■□□□ 1.05
PALLD-210ENST00000508898 FHAD1B1AJZ9 1412 aa21.61■■□□□ 1.05
PALLD-210ENST00000508898 MAGI1Q96QZ7 1491 aaPredicted RBP21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms