RNA–Protein interactions for RNA: ENST00000502640.5

LDB2-203, Transcript of LIM domain binding 2, humanhuman

TSL 1 (best) BASIC

Gene LDB2, Length 2,626 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2-203ENST00000502640 NISCHQ9Y2I1 1504 aa17.95■□□□□ 0.46
LDB2-203ENST00000502640 CCDC180Q9P1Z9 1646 aa15.53■□□□□ 0.08
LDB2-203ENST00000502640 DCAF8L2P0C7V8 631 aa15.15■□□□□ 0.02
LDB2-203ENST00000502640 ZCCHC6Q5VYS8 1495 aaKnown RBP15.06■□□□□ 0
LDB2-203ENST00000502640 ABCC9O60706 1549 aa14.98□□□□□ -0.01
LDB2-203ENST00000502640 SHROOM4Q9ULL8 1493 aa14.93□□□□□ -0.02
LDB2-203ENST00000502640 DCAF1Q9Y4B6 1507 aa14.7□□□□□ -0.06
LDB2-203ENST00000502640 NACADO15069 1562 aa14.51□□□□□ -0.09
LDB2-203ENST00000502640 SCRIBQ14160 1630 aa14.51□□□□□ -0.09
LDB2-203ENST00000502640 MYO15BQ96JP2 1530 aa14.49□□□□□ -0.09
LDB2-203ENST00000502640 RB1CC1Q8TDY2 1594 aa14.43□□□□□ -0.1
LDB2-203ENST00000502640 SUPT5HO00267 1087 aaKnown RBP14.34□□□□□ -0.11
LDB2-203ENST00000502640 PABPN1Q86U42 306 aaKnown RBP eCLIP14.2□□□□□ -0.14
LDB2-203ENST00000502640 UNC13AQ9UPW8 1703 aa14.17□□□□□ -0.14
LDB2-203ENST00000502640 CECR2Q9BXF3 1484 aa14.06□□□□□ -0.16
LDB2-203ENST00000502640 BICRAQ9NZM4 1560 aa14.03□□□□□ -0.16
LDB2-203ENST00000502640 RSF1Q96T23 1441 aaPredicted RBP13.97□□□□□ -0.17
LDB2-203ENST00000502640 MROH2BQ7Z745 1585 aa13.93□□□□□ -0.18
LDB2-203ENST00000502640 BAZ1AQ9NRL2 1556 aaPredicted RBP13.84□□□□□ -0.19
LDB2-203ENST00000502640 WIZO95785 1651 aa13.83□□□□□ -0.2
LDB2-203ENST00000502640 SMARCA4P51532 1647 aa13.8□□□□□ -0.2
LDB2-203ENST00000502640 EIF4G1Q04637 1599 aaKnown RBP13.63□□□□□ -0.23
LDB2-203ENST00000502640 ATAD2BQ9ULI0 1458 aa13.6□□□□□ -0.23
LDB2-203ENST00000502640 TOP2AP11388 1531 aaKnown RBP13.6□□□□□ -0.23
LDB2-203ENST00000502640 CHIC1Q5VXU3 224 aa13.6□□□□□ -0.23
LDB2-203ENST00000502640 SLC24A1O60721 1099 aa13.57□□□□□ -0.24
LDB2-203ENST00000502640 BAZ1BQ9UIG0 1483 aaKnown RBP13.54□□□□□ -0.24
LDB2-203ENST00000502640 SMARCA2P51531 1590 aa13.53□□□□□ -0.24
LDB2-203ENST00000502640 PEG3Q9GZU2 1588 aa13.53□□□□□ -0.24
LDB2-203ENST00000502640 CCDC88BA6NC98 1476 aa13.53□□□□□ -0.24
LDB2-203ENST00000502640 CC2D2AQ9P2K1 1620 aa13.45□□□□□ -0.26
LDB2-203ENST00000502640 NCAPD3P42695 1498 aa13.43□□□□□ -0.26
LDB2-203ENST00000502640 TRIM41Q8WV44 630 aa13.39□□□□□ -0.27
LDB2-203ENST00000502640 HMGXB3Q12766 1538 aa13.38□□□□□ -0.27
LDB2-203ENST00000502640 DNAJC5BQ9UF47 199 aa13.32□□□□□ -0.28
LDB2-203ENST00000502640 ABCC8Q09428 1581 aa13.32□□□□□ -0.28
LDB2-203ENST00000502640 PELP1Q8IZL8 1130 aaKnown RBP13.29□□□□□ -0.28
LDB2-203ENST00000502640 FAM9AQ8IZU1 332 aaPredicted RBP13.29□□□□□ -0.28
LDB2-203ENST00000502640 PRKCSHP14314 528 aaPredicted RBP13.26□□□□□ -0.29
LDB2-203ENST00000502640 EHMT2Q96KQ7 1210 aa13.24□□□□□ -0.29
LDB2-203ENST00000502640 LOC105371045A0A1W2PR82 267 aa13.2□□□□□ -0.3
LDB2-203ENST00000502640 MYT1Q01538 1121 aa13.2□□□□□ -0.3
LDB2-203ENST00000502640 WRNQ14191 1432 aaPredicted RBP eCLIP13.16□□□□□ -0.3
LDB2-203ENST00000502640 CFTRP13569 1480 aa13.15□□□□□ -0.3
LDB2-203ENST00000502640 CADPSQ9ULU8 1353 aa13.15□□□□□ -0.3
LDB2-203ENST00000502640 NESP48681 1621 aa13.14□□□□□ -0.31
LDB2-203ENST00000502640 SYNJ1O43426 1573 aa13.11□□□□□ -0.31
LDB2-203ENST00000502640 SOGA1O94964 1423 aa13.06□□□□□ -0.32
LDB2-203ENST00000502640 RUSC2Q8N2Y8 1516 aa13.03□□□□□ -0.32
LDB2-203ENST00000502640 FANCD2Q9BXW9 1451 aa13.02□□□□□ -0.32
LDB2-203ENST00000502640 CUX1P39880 1505 aa13.02□□□□□ -0.33
LDB2-203ENST00000502640 PRDM2Q13029 1718 aa12.99□□□□□ -0.33
LDB2-203ENST00000502640 TOP2BQ02880 1626 aa12.98□□□□□ -0.33
LDB2-203ENST00000502640 LAMC3Q9Y6N6 1575 aa12.96□□□□□ -0.33
LDB2-203ENST00000502640 BIVM-ERCC5R4GMW8 1640 aa12.94□□□□□ -0.34
LDB2-203ENST00000502640 CEP164Q9UPV0 1460 aa12.93□□□□□ -0.34
LDB2-203ENST00000502640 CSRNP3Q8WYN3 585 aa12.92□□□□□ -0.34
LDB2-203ENST00000502640 PDS5BQ9NTI5 1447 aa12.92□□□□□ -0.34
LDB2-203ENST00000502640 KIF21AQ7Z4S6 1674 aa12.89□□□□□ -0.35
LDB2-203ENST00000502640 FGD5Q6ZNL6 1462 aa12.89□□□□□ -0.35
LDB2-203ENST00000502640 TOPBP1Q92547 1522 aa12.86□□□□□ -0.35
LDB2-203ENST00000502640 UBTFP17480 764 aaKnown RBP12.86□□□□□ -0.35
LDB2-203ENST00000502640 URB2Q14146 1524 aaKnown RBP12.86□□□□□ -0.35
LDB2-203ENST00000502640 EEA1Q15075 1411 aa12.85□□□□□ -0.35
LDB2-203ENST00000502640 RAD54L2Q9Y4B4 1467 aa12.85□□□□□ -0.35
LDB2-203ENST00000502640 DNMBPQ6XZF7 1577 aa12.84□□□□□ -0.35
LDB2-203ENST00000502640 CUX2O14529 1486 aa12.84□□□□□ -0.35
LDB2-203ENST00000502640 TTBK1Q5TCY1 1321 aaPredicted RBP12.83□□□□□ -0.35
LDB2-203ENST00000502640 RANGAP1P46060 587 aaPredicted RBP12.82□□□□□ -0.36
LDB2-203ENST00000502640 POLA1P09884 1462 aaPredicted RBP12.82□□□□□ -0.36
LDB2-203ENST00000502640 ERCC6Q03468 1493 aa12.81□□□□□ -0.36
LDB2-203ENST00000502640 KIF27Q86VH2 1401 aa12.81□□□□□ -0.36
LDB2-203ENST00000502640 APLP2Q06481 763 aa12.77□□□□□ -0.36
LDB2-203ENST00000502640 RAPGEF2Q9Y4G8 1499 aa12.77□□□□□ -0.36
LDB2-203ENST00000502640 GOLGA3Q08378 1498 aa12.76□□□□□ -0.37
LDB2-203ENST00000502640 MRC2Q9UBG0 1479 aa12.75□□□□□ -0.37
LDB2-203ENST00000502640 TDRD9Q8NDG6 1382 aaKnown RBP12.75□□□□□ -0.37
LDB2-203ENST00000502640 IGF1RP08069 1367 aa12.71□□□□□ -0.37
LDB2-203ENST00000502640 CEP162Q5TB80 1403 aa12.71□□□□□ -0.38
LDB2-203ENST00000502640 KIF21BO75037 1637 aa12.71□□□□□ -0.38
LDB2-203ENST00000502640 TNIKQ9UKE5 1360 aa12.71□□□□□ -0.38
LDB2-203ENST00000502640 ABCA10Q8WWZ4 1543 aa12.7□□□□□ -0.38
LDB2-203ENST00000502640 PPARGC1BQ86YN6 1023 aaKnown RBP12.69□□□□□ -0.38
LDB2-203ENST00000502640 PRXQ9BXM0 1461 aa12.69□□□□□ -0.38
LDB2-203ENST00000502640 CARMIL1Q5VZK9 1371 aa12.67□□□□□ -0.38
LDB2-203ENST00000502640 ERICH6Q7L0X2 663 aa12.66□□□□□ -0.38
LDB2-203ENST00000502640 AQRO60306 1485 aaKnown RBP eCLIP12.65□□□□□ -0.38
LDB2-203ENST00000502640 WDR62O43379 1518 aa12.65□□□□□ -0.38
LDB2-203ENST00000502640 TARBP1Q13395 1621 aaKnown RBP12.63□□□□□ -0.39
LDB2-203ENST00000502640 GAPVD1Q14C86 1478 aa12.63□□□□□ -0.39
LDB2-203ENST00000502640 THOC2Q8NI27 1593 aaKnown RBP12.63□□□□□ -0.39
LDB2-203ENST00000502640 ZNF608Q9ULD9 1512 aaPredicted RBP12.63□□□□□ -0.39
LDB2-203ENST00000502640 WDR97A6NE52 1622 aa12.63□□□□□ -0.39
LDB2-203ENST00000502640 ERICH3Q5RHP9 1530 aa12.61□□□□□ -0.39
LDB2-203ENST00000502640 CLIP1P30622 1438 aa12.61□□□□□ -0.39
LDB2-203ENST00000502640 ABCA5Q8WWZ7 1642 aa12.59□□□□□ -0.39
LDB2-203ENST00000502640 DAXXQ9UER7 740 aaPredicted RBP12.59□□□□□ -0.39
LDB2-203ENST00000502640 PCGF6Q9BYE7 350 aa12.58□□□□□ -0.4
LDB2-203ENST00000502640 IFT140Q96RY7 1462 aa12.58□□□□□ -0.4
LDB2-203ENST00000502640 P3H3Q8IVL6 736 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms