RNA–Protein interactions for RNA: ENST00000498607.2

SCG5-209, Transcript of secretogranin V, humanhuman

TSL 2

Gene SCG5, Length 853 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG5-209ENST00000498607 NISCHQ9Y2I1 1504 aa27.31■■□□□ 1.96
SCG5-209ENST00000498607 CHIC1Q5VXU3 224 aa26.26■■□□□ 1.79
SCG5-209ENST00000498607 AEBP2Q6ZN18 517 aaPredicted RBP26.24■■□□□ 1.79
SCG5-209ENST00000498607 CCDC180Q9P1Z9 1646 aa24.1■■□□□ 1.45
SCG5-209ENST00000498607 PHF23Q9BUL5 403 aaPredicted RBP23.15■■□□□ 1.3
SCG5-209ENST00000498607 ABCC9O60706 1549 aa22.96■■□□□ 1.27
SCG5-209ENST00000498607 ZCCHC6Q5VYS8 1495 aaKnown RBP22.89■■□□□ 1.25
SCG5-209ENST00000498607 DCAF1Q9Y4B6 1507 aa22.65■■□□□ 1.22
SCG5-209ENST00000498607 MYO15BQ96JP2 1530 aa22.54■■□□□ 1.2
SCG5-209ENST00000498607 DCAF8L2P0C7V8 631 aa22.49■■□□□ 1.19
SCG5-209ENST00000498607 NACADO15069 1562 aa22.48■■□□□ 1.19
SCG5-209ENST00000498607 RB1CC1Q8TDY2 1594 aa22.37■■□□□ 1.17
SCG5-209ENST00000498607 SENP3Q9H4L4 574 aaPredicted RBP22.18■■□□□ 1.14
SCG5-209ENST00000498607 SCRIBQ14160 1630 aa21.98■■□□□ 1.11
SCG5-209ENST00000498607 UNC13AQ9UPW8 1703 aa21.89■■□□□ 1.1
SCG5-209ENST00000498607 SHROOM4Q9ULL8 1493 aa21.88■■□□□ 1.09
SCG5-209ENST00000498607 BICRAQ9NZM4 1560 aa21.67■■□□□ 1.06
SCG5-209ENST00000498607 PLPPR3Q6T4P5 718 aa21.59■■□□□ 1.05
SCG5-209ENST00000498607 PABPN1Q86U42 306 aaKnown RBP eCLIP21.49■■□□□ 1.03
SCG5-209ENST00000498607 CECR2Q9BXF3 1484 aa21.2■□□□□ 0.98
SCG5-209ENST00000498607 BAZ1AQ9NRL2 1556 aaPredicted RBP21.14■□□□□ 0.98
SCG5-209ENST00000498607 SMARCA4P51532 1647 aa21.1■□□□□ 0.97
SCG5-209ENST00000498607 MROH2BQ7Z745 1585 aa21.06■□□□□ 0.96
SCG5-209ENST00000498607 EIF4G1Q04637 1599 aaKnown RBP21.03■□□□□ 0.96
SCG5-209ENST00000498607 RSF1Q96T23 1441 aaPredicted RBP21.01■□□□□ 0.95
SCG5-209ENST00000498607 PEG3Q9GZU2 1588 aa20.89■□□□□ 0.93
SCG5-209ENST00000498607 WIZO95785 1651 aa20.86■□□□□ 0.93
SCG5-209ENST00000498607 SUPT5HO00267 1087 aaKnown RBP20.86■□□□□ 0.93
SCG5-209ENST00000498607 SMARCA2P51531 1590 aa20.84■□□□□ 0.93
SCG5-209ENST00000498607 CC2D2AQ9P2K1 1620 aa20.81■□□□□ 0.92
SCG5-209ENST00000498607 ATAD2BQ9ULI0 1458 aa20.81■□□□□ 0.92
SCG5-209ENST00000498607 NCAPD3P42695 1498 aa20.71■□□□□ 0.91
SCG5-209ENST00000498607 TOP2AP11388 1531 aaKnown RBP20.7■□□□□ 0.9
SCG5-209ENST00000498607 HMGXB3Q12766 1538 aa20.7■□□□□ 0.9
SCG5-209ENST00000498607 BAZ1BQ9UIG0 1483 aaKnown RBP20.68■□□□□ 0.9
SCG5-209ENST00000498607 DNAJC5BQ9UF47 199 aa20.5■□□□□ 0.87
SCG5-209ENST00000498607 FOXD1Q16676 465 aa20.49■□□□□ 0.87
SCG5-209ENST00000498607 CCDC88BA6NC98 1476 aa20.42■□□□□ 0.86
SCG5-209ENST00000498607 PPP6R1Q9UPN7 881 aa20.19■□□□□ 0.82
SCG5-209ENST00000498607 ADRA2BP18089 450 aa20.18■□□□□ 0.82
SCG5-209ENST00000498607 CFTRP13569 1480 aa20.14■□□□□ 0.81
SCG5-209ENST00000498607 PRDM2Q13029 1718 aa20.12■□□□□ 0.81
SCG5-209ENST00000498607 CADPSQ9ULU8 1353 aa20.11■□□□□ 0.81
SCG5-209ENST00000498607 LAMC3Q9Y6N6 1575 aa20.09■□□□□ 0.81
SCG5-209ENST00000498607 NESP48681 1621 aa20.03■□□□□ 0.8
SCG5-209ENST00000498607 PDS5BQ9NTI5 1447 aa19.91■□□□□ 0.78
SCG5-209ENST00000498607 FANCD2Q9BXW9 1451 aa19.91■□□□□ 0.78
SCG5-209ENST00000498607 KIF21AQ7Z4S6 1674 aa19.86■□□□□ 0.77
SCG5-209ENST00000498607 ABCC8Q09428 1581 aa19.85■□□□□ 0.77
SCG5-209ENST00000498607 CEP164Q9UPV0 1460 aa19.84■□□□□ 0.77
SCG5-209ENST00000498607 WRNQ14191 1432 aaPredicted RBP eCLIP19.8■□□□□ 0.76
SCG5-209ENST00000498607 ERCC6Q03468 1493 aa19.74■□□□□ 0.75
SCG5-209ENST00000498607 SYNJ1O43426 1573 aa19.74■□□□□ 0.75
SCG5-209ENST00000498607 BIVM-ERCC5R4GMW8 1640 aa19.73■□□□□ 0.75
SCG5-209ENST00000498607 CUX1P39880 1505 aa19.73■□□□□ 0.75
SCG5-209ENST00000498607 TOP2BQ02880 1626 aa19.72■□□□□ 0.75
SCG5-209ENST00000498607 DNMBPQ6XZF7 1577 aa19.7■□□□□ 0.74
SCG5-209ENST00000498607 MRC2Q9UBG0 1479 aa19.7■□□□□ 0.74
SCG5-209ENST00000498607 URB2Q14146 1524 aaKnown RBP19.68■□□□□ 0.74
SCG5-209ENST00000498607 TOPBP1Q92547 1522 aa19.67■□□□□ 0.74
SCG5-209ENST00000498607 TRIM41Q8WV44 630 aa19.67■□□□□ 0.74
SCG5-209ENST00000498607 THOC2Q8NI27 1593 aaKnown RBP19.66■□□□□ 0.74
SCG5-209ENST00000498607 WDR62O43379 1518 aa19.62■□□□□ 0.73
SCG5-209ENST00000498607 FGD5Q6ZNL6 1462 aa19.57■□□□□ 0.72
SCG5-209ENST00000498607 POLA1P09884 1462 aaPredicted RBP19.54■□□□□ 0.72
SCG5-209ENST00000498607 PIAS4Q8N2W9 510 aaPredicted RBP19.44■□□□□ 0.7
SCG5-209ENST00000498607 SOGA1O94964 1423 aa19.43■□□□□ 0.7
SCG5-209ENST00000498607 CUX2O14529 1486 aa19.43■□□□□ 0.7
SCG5-209ENST00000498607 WDR97A6NE52 1622 aa19.43■□□□□ 0.7
SCG5-209ENST00000498607 TARBP1Q13395 1621 aaKnown RBP19.42■□□□□ 0.7
SCG5-209ENST00000498607 RAD54L2Q9Y4B4 1467 aa19.41■□□□□ 0.7
SCG5-209ENST00000498607 ABCA10Q8WWZ4 1543 aa19.41■□□□□ 0.7
SCG5-209ENST00000498607 IFT140Q96RY7 1462 aa19.4■□□□□ 0.7
SCG5-209ENST00000498607 EEA1Q15075 1411 aa19.37■□□□□ 0.69
SCG5-209ENST00000498607 KIF27Q86VH2 1401 aa19.34■□□□□ 0.69
SCG5-209ENST00000498607 KCNA4P22459 653 aa19.34■□□□□ 0.69
SCG5-209ENST00000498607 RUSC2Q8N2Y8 1516 aa19.31■□□□□ 0.68
SCG5-209ENST00000498607 ABCA5Q8WWZ7 1642 aa19.31■□□□□ 0.68
SCG5-209ENST00000498607 GAPVD1Q14C86 1478 aa19.24■□□□□ 0.67
SCG5-209ENST00000498607 TDRD9Q8NDG6 1382 aaKnown RBP19.24■□□□□ 0.67
SCG5-209ENST00000498607 FAM9AQ8IZU1 332 aaPredicted RBP19.24■□□□□ 0.67
SCG5-209ENST00000498607 ZNF608Q9ULD9 1512 aaPredicted RBP19.24■□□□□ 0.67
SCG5-209ENST00000498607 EIF4G3O43432 1585 aaKnown RBP19.23■□□□□ 0.67
SCG5-209ENST00000498607 PBRM1Q86U86 1689 aa19.21■□□□□ 0.67
SCG5-209ENST00000498607 CSRNP3Q8WYN3 585 aa19.2■□□□□ 0.66
SCG5-209ENST00000498607 ERICH3Q5RHP9 1530 aa19.2■□□□□ 0.66
SCG5-209ENST00000498607 AQRO60306 1485 aaKnown RBP eCLIP19.19■□□□□ 0.66
SCG5-209ENST00000498607 IGF1RP08069 1367 aa19.17■□□□□ 0.66
SCG5-209ENST00000498607 GRIN2BQ13224 1484 aa19.16■□□□□ 0.66
SCG5-209ENST00000498607 CUL7Q14999 1698 aa19.15■□□□□ 0.66
SCG5-209ENST00000498607 KIF21BO75037 1637 aa19.14■□□□□ 0.66
SCG5-209ENST00000498607 PRXQ9BXM0 1461 aa19.12■□□□□ 0.65
SCG5-209ENST00000498607 ADAMTS12P58397 1594 aa19.08■□□□□ 0.65
SCG5-209ENST00000498607 PPP4R3CPQ6ZMV5 832 aa19.08■□□□□ 0.64
SCG5-209ENST00000498607 CARMIL1Q5VZK9 1371 aa19.07■□□□□ 0.64
SCG5-209ENST00000498607 MAGI1Q96QZ7 1491 aaPredicted RBP19.07■□□□□ 0.64
SCG5-209ENST00000498607 SNAPC4Q5SXM2 1469 aa19.06■□□□□ 0.64
SCG5-209ENST00000498607 GOLGA3Q08378 1498 aa19.05■□□□□ 0.64
SCG5-209ENST00000498607 RAPGEF2Q9Y4G8 1499 aa19.04■□□□□ 0.64
SCG5-209ENST00000498607 FHAD1B1AJZ9 1412 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms