RNA–Protein interactions for RNA: ENST00000495656.5

ITSN1-232, Transcript of intersectin 1, humanhuman

TSL 1 (best)

Gene ITSN1, Length 535 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-232ENST00000495656 AEBP2Q6ZN18 517 aaPredicted RBP19.59■□□□□ 0.73
ITSN1-232ENST00000495656 CHIC1Q5VXU3 224 aa19.12■□□□□ 0.65
ITSN1-232ENST00000495656 NISCHQ9Y2I1 1504 aa17.57■□□□□ 0.4
ITSN1-232ENST00000495656 PHF23Q9BUL5 403 aaPredicted RBP16.74■□□□□ 0.27
ITSN1-232ENST00000495656 SENP3Q9H4L4 574 aaPredicted RBP16.73■□□□□ 0.27
ITSN1-232ENST00000495656 ABCC9O60706 1549 aa15.92■□□□□ 0.14
ITSN1-232ENST00000495656 CCDC180Q9P1Z9 1646 aa15.82■□□□□ 0.12
ITSN1-232ENST00000495656 PLPPR3Q6T4P5 718 aa15.52■□□□□ 0.08
ITSN1-232ENST00000495656 FOXD1Q16676 465 aa15.47■□□□□ 0.07
ITSN1-232ENST00000495656 RB1CC1Q8TDY2 1594 aa15.08■□□□□ 0
ITSN1-232ENST00000495656 DNAJC5BQ9UF47 199 aa15.07■□□□□ 0
ITSN1-232ENST00000495656 NACADO15069 1562 aa14.94□□□□□ -0.02
ITSN1-232ENST00000495656 UNC13AQ9UPW8 1703 aa14.86□□□□□ -0.03
ITSN1-232ENST00000495656 DCAF8L2P0C7V8 631 aa14.82□□□□□ -0.04
ITSN1-232ENST00000495656 PABPN1Q86U42 306 aaKnown RBP eCLIP14.79□□□□□ -0.04
ITSN1-232ENST00000495656 PPP6R1Q9UPN7 881 aa14.79□□□□□ -0.04
ITSN1-232ENST00000495656 ADRA2BP18089 450 aa14.78□□□□□ -0.04
ITSN1-232ENST00000495656 BICRAQ9NZM4 1560 aa14.73□□□□□ -0.05
ITSN1-232ENST00000495656 MYO15BQ96JP2 1530 aa14.7□□□□□ -0.06
ITSN1-232ENST00000495656 PIAS4Q8N2W9 510 aaPredicted RBP14.6□□□□□ -0.07
ITSN1-232ENST00000495656 ZCCHC6Q5VYS8 1495 aaKnown RBP14.55□□□□□ -0.08
ITSN1-232ENST00000495656 DCAF1Q9Y4B6 1507 aa14.49□□□□□ -0.09
ITSN1-232ENST00000495656 SCRIBQ14160 1630 aa14.42□□□□□ -0.1
ITSN1-232ENST00000495656 SHROOM4Q9ULL8 1493 aa14.39□□□□□ -0.11
ITSN1-232ENST00000495656 CC2D2AQ9P2K1 1620 aa14.39□□□□□ -0.11
ITSN1-232ENST00000495656 MSH5O43196 834 aa14.38□□□□□ -0.11
ITSN1-232ENST00000495656 CECR2Q9BXF3 1484 aa14.32□□□□□ -0.12
ITSN1-232ENST00000495656 EIF4G1Q04637 1599 aaKnown RBP14.32□□□□□ -0.12
ITSN1-232ENST00000495656 DNAJC5Q9H3Z4 198 aa13.84□□□□□ -0.19
ITSN1-232ENST00000495656 NCAPD3P42695 1498 aa13.8□□□□□ -0.2
ITSN1-232ENST00000495656 ATAD2BQ9ULI0 1458 aa13.77□□□□□ -0.21
ITSN1-232ENST00000495656 SMARCA4P51532 1647 aa13.75□□□□□ -0.21
ITSN1-232ENST00000495656 CUX2O14529 1486 aa13.72□□□□□ -0.21
ITSN1-232ENST00000495656 HMGXB3Q12766 1538 aa13.7□□□□□ -0.22
ITSN1-232ENST00000495656 SMARCA2P51531 1590 aa13.7□□□□□ -0.22
ITSN1-232ENST00000495656 ERCC6Q03468 1493 aa13.69□□□□□ -0.22
ITSN1-232ENST00000495656 NESP48681 1621 aa13.68□□□□□ -0.22
ITSN1-232ENST00000495656 SCAF1Q9H7N4 1312 aaKnown RBP13.65□□□□□ -0.22
ITSN1-232ENST00000495656 PPP4R3CPQ6ZMV5 832 aa13.63□□□□□ -0.23
ITSN1-232ENST00000495656 BAZ1AQ9NRL2 1556 aaPredicted RBP13.62□□□□□ -0.23
ITSN1-232ENST00000495656 PEG3Q9GZU2 1588 aa13.61□□□□□ -0.23
ITSN1-232ENST00000495656 BAZ1BQ9UIG0 1483 aaKnown RBP13.61□□□□□ -0.23
ITSN1-232ENST00000495656 MROH2BQ7Z745 1585 aa13.57□□□□□ -0.24
ITSN1-232ENST00000495656 THOC2Q8NI27 1593 aaKnown RBP13.56□□□□□ -0.24
ITSN1-232ENST00000495656 LAMC3Q9Y6N6 1575 aa13.52□□□□□ -0.25
ITSN1-232ENST00000495656 KIF21AQ7Z4S6 1674 aa13.52□□□□□ -0.25
ITSN1-232ENST00000495656 MAPK8IP2Q13387 824 aaPredicted RBP13.43□□□□□ -0.26
ITSN1-232ENST00000495656 WIZO95785 1651 aa13.43□□□□□ -0.26
ITSN1-232ENST00000495656 PDS5BQ9NTI5 1447 aa13.39□□□□□ -0.27
ITSN1-232ENST00000495656 CADPSQ9ULU8 1353 aa13.37□□□□□ -0.27
ITSN1-232ENST00000495656 MRC2Q9UBG0 1479 aa13.32□□□□□ -0.28
ITSN1-232ENST00000495656 NCBP3Q53F19 620 aaKnown RBP13.32□□□□□ -0.28
ITSN1-232ENST00000495656 WDR62O43379 1518 aa13.32□□□□□ -0.28
ITSN1-232ENST00000495656 CNKSR2Q8WXI2 1034 aa13.31□□□□□ -0.28
ITSN1-232ENST00000495656 DMRT2Q9Y5R5 561 aa13.31□□□□□ -0.28
ITSN1-232ENST00000495656 CEP164Q9UPV0 1460 aa13.24□□□□□ -0.29
ITSN1-232ENST00000495656 FANCD2Q9BXW9 1451 aa13.23□□□□□ -0.29
ITSN1-232ENST00000495656 RSF1Q96T23 1441 aaPredicted RBP13.22□□□□□ -0.29
ITSN1-232ENST00000495656 CFTRP13569 1480 aa13.22□□□□□ -0.29
ITSN1-232ENST00000495656 TOP2AP11388 1531 aaKnown RBP13.19□□□□□ -0.3
ITSN1-232ENST00000495656 KCNA4P22459 653 aa13.18□□□□□ -0.3
ITSN1-232ENST00000495656 TRIM41Q8WV44 630 aa13.18□□□□□ -0.3
ITSN1-232ENST00000495656 POTEDQ86YR6 584 aa13.17□□□□□ -0.3
ITSN1-232ENST00000495656 URB2Q14146 1524 aaKnown RBP13.17□□□□□ -0.3
ITSN1-232ENST00000495656 PRDM2Q13029 1718 aa13.13□□□□□ -0.31
ITSN1-232ENST00000495656 RNF216Q9NWF9 866 aaPredicted RBP13.06□□□□□ -0.32
ITSN1-232ENST00000495656 CCDC88BA6NC98 1476 aa13.05□□□□□ -0.32
ITSN1-232ENST00000495656 OSCARQ8IYS5 282 aa13.05□□□□□ -0.32
ITSN1-232ENST00000495656 NPM3O75607 178 aaKnown RBP13.04□□□□□ -0.32
ITSN1-232ENST00000495656 ZNF608Q9ULD9 1512 aaPredicted RBP13.03□□□□□ -0.32
ITSN1-232ENST00000495656 HOXD11P31277 338 aaPredicted RBP13.02□□□□□ -0.33
ITSN1-232ENST00000495656 TOPBP1Q92547 1522 aa12.99□□□□□ -0.33
ITSN1-232ENST00000495656 RIMBP3CA6NJZ7 1639 aa12.98□□□□□ -0.33
ITSN1-232ENST00000495656 RIMBP3BA6NNM3 1639 aa12.98□□□□□ -0.33
ITSN1-232ENST00000495656 RIMBP3Q9UFD9 1639 aa12.98□□□□□ -0.33
ITSN1-232ENST00000495656 IFT140Q96RY7 1462 aa12.97□□□□□ -0.33
ITSN1-232ENST00000495656 EIF4G3O43432 1585 aaKnown RBP12.94□□□□□ -0.34
ITSN1-232ENST00000495656 DNMBPQ6XZF7 1577 aa12.92□□□□□ -0.34
ITSN1-232ENST00000495656 TARBP1Q13395 1621 aaKnown RBP12.91□□□□□ -0.34
ITSN1-232ENST00000495656 ARHGEF11O15085 1522 aa12.9□□□□□ -0.34
ITSN1-232ENST00000495656 CHD1O14646 1710 aa12.9□□□□□ -0.34
ITSN1-232ENST00000495656 ABCC8Q09428 1581 aa12.89□□□□□ -0.35
ITSN1-232ENST00000495656 AQRO60306 1485 aaKnown RBP eCLIP12.88□□□□□ -0.35
ITSN1-232ENST00000495656 POLA1P09884 1462 aaPredicted RBP12.85□□□□□ -0.35
ITSN1-232ENST00000495656 RAD54L2Q9Y4B4 1467 aa12.82□□□□□ -0.36
ITSN1-232ENST00000495656 CYB5RLQ6IPT4 315 aa12.78□□□□□ -0.36
ITSN1-232ENST00000495656 ARAP1Q96P48 1450 aa12.78□□□□□ -0.36
ITSN1-232ENST00000495656 TDRD9Q8NDG6 1382 aaKnown RBP12.77□□□□□ -0.37
ITSN1-232ENST00000495656 SOGA1O94964 1423 aa12.76□□□□□ -0.37
ITSN1-232ENST00000495656 CUX1P39880 1505 aa12.75□□□□□ -0.37
ITSN1-232ENST00000495656 FBLN2P98095 1184 aa12.75□□□□□ -0.37
ITSN1-232ENST00000495656 FGD5Q6ZNL6 1462 aa12.75□□□□□ -0.37
ITSN1-232ENST00000495656 DCAF8L1A6NGE4 600 aa12.74□□□□□ -0.37
ITSN1-232ENST00000495656 SNAPC4Q5SXM2 1469 aa12.72□□□□□ -0.37
ITSN1-232ENST00000495656 WDR97A6NE52 1622 aa12.72□□□□□ -0.37
ITSN1-232ENST00000495656 CLASP1Q7Z460 1538 aa12.72□□□□□ -0.37
ITSN1-232ENST00000495656 PBRM1Q86U86 1689 aa12.67□□□□□ -0.38
ITSN1-232ENST00000495656 MAGI1Q96QZ7 1491 aaPredicted RBP12.66□□□□□ -0.38
ITSN1-232ENST00000495656 GRIN2BQ13224 1484 aa12.65□□□□□ -0.38
ITSN1-232ENST00000495656 SYNJ1O43426 1573 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms