RNA–Protein interactions for RNA: ENST00000495302.5

CBWD1-217, Transcript of COBW domain containing 1, humanhuman

TSL 1 (best)

Gene CBWD1, Length 2,553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-217ENST00000495302 NISCHQ9Y2I1 1504 aa11.62□□□□□ -0.55
CBWD1-217ENST00000495302 CCDC180Q9P1Z9 1646 aa10.09□□□□□ -0.79
CBWD1-217ENST00000495302 ZCCHC6Q5VYS8 1495 aaKnown RBP9.75□□□□□ -0.85
CBWD1-217ENST00000495302 DCAF8L2P0C7V8 631 aa9.64□□□□□ -0.87
CBWD1-217ENST00000495302 ABCC9O60706 1549 aa9.6□□□□□ -0.87
CBWD1-217ENST00000495302 DCAF1Q9Y4B6 1507 aa9.57□□□□□ -0.88
CBWD1-217ENST00000495302 SHROOM4Q9ULL8 1493 aa9.55□□□□□ -0.88
CBWD1-217ENST00000495302 MYO15BQ96JP2 1530 aa9.43□□□□□ -0.9
CBWD1-217ENST00000495302 NACADO15069 1562 aa9.4□□□□□ -0.91
CBWD1-217ENST00000495302 SCRIBQ14160 1630 aa9.34□□□□□ -0.91
CBWD1-217ENST00000495302 RB1CC1Q8TDY2 1594 aa9.32□□□□□ -0.92
CBWD1-217ENST00000495302 UNC13AQ9UPW8 1703 aa9.21□□□□□ -0.93
CBWD1-217ENST00000495302 SUPT5HO00267 1087 aaKnown RBP9.18□□□□□ -0.94
CBWD1-217ENST00000495302 BICRAQ9NZM4 1560 aa9.09□□□□□ -0.95
CBWD1-217ENST00000495302 PABPN1Q86U42 306 aaKnown RBP eCLIP9.09□□□□□ -0.95
CBWD1-217ENST00000495302 CECR2Q9BXF3 1484 aa9.08□□□□□ -0.96
CBWD1-217ENST00000495302 RSF1Q96T23 1441 aaPredicted RBP9.04□□□□□ -0.96
CBWD1-217ENST00000495302 SLC24A1O60721 1099 aa9.02□□□□□ -0.97
CBWD1-217ENST00000495302 MROH2BQ7Z745 1585 aa9.01□□□□□ -0.97
CBWD1-217ENST00000495302 BAZ1AQ9NRL2 1556 aaPredicted RBP8.95□□□□□ -0.98
CBWD1-217ENST00000495302 WIZO95785 1651 aa8.94□□□□□ -0.98
CBWD1-217ENST00000495302 SMARCA4P51532 1647 aa8.93□□□□□ -0.98
CBWD1-217ENST00000495302 AEBP2Q6ZN18 517 aaPredicted RBP8.92□□□□□ -0.98
CBWD1-217ENST00000495302 PEG3Q9GZU2 1588 aa8.8□□□□□ -1
CBWD1-217ENST00000495302 TOP2AP11388 1531 aaKnown RBP8.8□□□□□ -1
CBWD1-217ENST00000495302 EIF4G1Q04637 1599 aaKnown RBP8.79□□□□□ -1
CBWD1-217ENST00000495302 CHIC1Q5VXU3 224 aa8.79□□□□□ -1
CBWD1-217ENST00000495302 ATAD2BQ9ULI0 1458 aa8.79□□□□□ -1
CBWD1-217ENST00000495302 SMARCA2P51531 1590 aa8.75□□□□□ -1.01
CBWD1-217ENST00000495302 CCDC88BA6NC98 1476 aa8.74□□□□□ -1.01
CBWD1-217ENST00000495302 BAZ1BQ9UIG0 1483 aaKnown RBP8.72□□□□□ -1.01
CBWD1-217ENST00000495302 NCAPD3P42695 1498 aa8.69□□□□□ -1.02
CBWD1-217ENST00000495302 CC2D2AQ9P2K1 1620 aa8.68□□□□□ -1.02
CBWD1-217ENST00000495302 HMGXB3Q12766 1538 aa8.66□□□□□ -1.02
CBWD1-217ENST00000495302 MYT1Q01538 1121 aa8.61□□□□□ -1.03
CBWD1-217ENST00000495302 TRIM41Q8WV44 630 aa8.6□□□□□ -1.03
CBWD1-217ENST00000495302 ABCC8Q09428 1581 aa8.59□□□□□ -1.03
CBWD1-217ENST00000495302 DNAJC5BQ9UF47 199 aa8.55□□□□□ -1.04
CBWD1-217ENST00000495302 TTBK1Q5TCY1 1321 aaPredicted RBP8.54□□□□□ -1.04
CBWD1-217ENST00000495302 CFTRP13569 1480 aa8.5□□□□□ -1.05
CBWD1-217ENST00000495302 LOC105371045A0A1W2PR82 267 aa8.5□□□□□ -1.05
CBWD1-217ENST00000495302 PELP1Q8IZL8 1130 aaKnown RBP8.49□□□□□ -1.05
CBWD1-217ENST00000495302 FAM9AQ8IZU1 332 aaPredicted RBP8.49□□□□□ -1.05
CBWD1-217ENST00000495302 WRNQ14191 1432 aaPredicted RBP eCLIP8.48□□□□□ -1.05
CBWD1-217ENST00000495302 SYNJ1O43426 1573 aa8.48□□□□□ -1.05
CBWD1-217ENST00000495302 CADPSQ9ULU8 1353 aa8.48□□□□□ -1.05
CBWD1-217ENST00000495302 PRDM2Q13029 1718 aa8.47□□□□□ -1.05
CBWD1-217ENST00000495302 NESP48681 1621 aa8.45□□□□□ -1.06
CBWD1-217ENST00000495302 SOGA1O94964 1423 aa8.43□□□□□ -1.06
CBWD1-217ENST00000495302 RUSC2Q8N2Y8 1516 aa8.42□□□□□ -1.06
CBWD1-217ENST00000495302 TOP2BQ02880 1626 aa8.41□□□□□ -1.06
CBWD1-217ENST00000495302 CUX1P39880 1505 aa8.41□□□□□ -1.06
CBWD1-217ENST00000495302 BIVM-ERCC5R4GMW8 1640 aa8.4□□□□□ -1.06
CBWD1-217ENST00000495302 EHMT2Q96KQ7 1210 aa8.4□□□□□ -1.06
CBWD1-217ENST00000495302 DAXXQ9UER7 740 aaPredicted RBP8.39□□□□□ -1.07
CBWD1-217ENST00000495302 FANCD2Q9BXW9 1451 aa8.39□□□□□ -1.07
CBWD1-217ENST00000495302 LAMC3Q9Y6N6 1575 aa8.38□□□□□ -1.07
CBWD1-217ENST00000495302 KIF21AQ7Z4S6 1674 aa8.33□□□□□ -1.08
CBWD1-217ENST00000495302 CSRNP3Q8WYN3 585 aa8.33□□□□□ -1.08
CBWD1-217ENST00000495302 EEA1Q15075 1411 aa8.32□□□□□ -1.08
CBWD1-217ENST00000495302 CEP164Q9UPV0 1460 aa8.32□□□□□ -1.08
CBWD1-217ENST00000495302 PDS5BQ9NTI5 1447 aa8.31□□□□□ -1.08
CBWD1-217ENST00000495302 FGD5Q6ZNL6 1462 aa8.31□□□□□ -1.08
CBWD1-217ENST00000495302 URB2Q14146 1524 aaKnown RBP8.3□□□□□ -1.08
CBWD1-217ENST00000495302 TOPBP1Q92547 1522 aa8.3□□□□□ -1.08
CBWD1-217ENST00000495302 DNMBPQ6XZF7 1577 aa8.3□□□□□ -1.08
CBWD1-217ENST00000495302 APLP2Q06481 763 aa8.27□□□□□ -1.08
CBWD1-217ENST00000495302 POLA1P09884 1462 aaPredicted RBP8.27□□□□□ -1.09
CBWD1-217ENST00000495302 RAD54L2Q9Y4B4 1467 aa8.27□□□□□ -1.09
CBWD1-217ENST00000495302 KIF27Q86VH2 1401 aa8.25□□□□□ -1.09
CBWD1-217ENST00000495302 CUX2O14529 1486 aa8.25□□□□□ -1.09
CBWD1-217ENST00000495302 KIF21BO75037 1637 aa8.25□□□□□ -1.09
CBWD1-217ENST00000495302 RAPGEF2Q9Y4G8 1499 aa8.24□□□□□ -1.09
CBWD1-217ENST00000495302 GOLGA3Q08378 1498 aa8.24□□□□□ -1.09
CBWD1-217ENST00000495302 UBTFP17480 764 aaKnown RBP8.23□□□□□ -1.09
CBWD1-217ENST00000495302 PRKCSHP14314 528 aaPredicted RBP8.23□□□□□ -1.09
CBWD1-217ENST00000495302 TNIKQ9UKE5 1360 aa8.22□□□□□ -1.09
CBWD1-217ENST00000495302 PRXQ9BXM0 1461 aa8.22□□□□□ -1.09
CBWD1-217ENST00000495302 IGF1RP08069 1367 aa8.22□□□□□ -1.09
CBWD1-217ENST00000495302 ABCA10Q8WWZ4 1543 aa8.22□□□□□ -1.09
CBWD1-217ENST00000495302 MRC2Q9UBG0 1479 aa8.21□□□□□ -1.09
CBWD1-217ENST00000495302 WDR97A6NE52 1622 aa8.21□□□□□ -1.1
CBWD1-217ENST00000495302 ERICH6Q7L0X2 663 aa8.2□□□□□ -1.1
CBWD1-217ENST00000495302 CEP162Q5TB80 1403 aa8.2□□□□□ -1.1
CBWD1-217ENST00000495302 ERCC6Q03468 1493 aa8.19□□□□□ -1.1
CBWD1-217ENST00000495302 TARBP1Q13395 1621 aaKnown RBP8.19□□□□□ -1.1
CBWD1-217ENST00000495302 TDRD9Q8NDG6 1382 aaKnown RBP8.18□□□□□ -1.1
CBWD1-217ENST00000495302 ERICH3Q5RHP9 1530 aa8.18□□□□□ -1.1
CBWD1-217ENST00000495302 WDR62O43379 1518 aa8.18□□□□□ -1.1
CBWD1-217ENST00000495302 THOC2Q8NI27 1593 aaKnown RBP8.16□□□□□ -1.1
CBWD1-217ENST00000495302 CARMIL1Q5VZK9 1371 aa8.16□□□□□ -1.1
CBWD1-217ENST00000495302 ABCA5Q8WWZ7 1642 aa8.16□□□□□ -1.1
CBWD1-217ENST00000495302 RANGAP1P46060 587 aaPredicted RBP8.15□□□□□ -1.11
CBWD1-217ENST00000495302 GAPVD1Q14C86 1478 aa8.14□□□□□ -1.11
CBWD1-217ENST00000495302 AQRO60306 1485 aaKnown RBP eCLIP8.13□□□□□ -1.11
CBWD1-217ENST00000495302 ZNF608Q9ULD9 1512 aaPredicted RBP8.13□□□□□ -1.11
CBWD1-217ENST00000495302 CLIP1P30622 1438 aa8.13□□□□□ -1.11
CBWD1-217ENST00000495302 IFT140Q96RY7 1462 aa8.11□□□□□ -1.11
CBWD1-217ENST00000495302 PPARGC1BQ86YN6 1023 aaKnown RBP8.11□□□□□ -1.11
CBWD1-217ENST00000495302 CUL7Q14999 1698 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms