RNA–Protein interactions for RNA: ENST00000494982.1

RAP1A-204, Transcript of RAP1A, member of RAS oncogene family, humanhuman

TSL 5

Gene RAP1A, Length 1,083 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1A-204ENST00000494982 AEBP2Q6ZN18 517 aaPredicted RBP24.64■■□□□ 1.54
RAP1A-204ENST00000494982 CHIC1Q5VXU3 224 aa23.74■■□□□ 1.39
RAP1A-204ENST00000494982 NISCHQ9Y2I1 1504 aa21.5■■□□□ 1.03
RAP1A-204ENST00000494982 SENP3Q9H4L4 574 aaPredicted RBP21.14■□□□□ 0.97
RAP1A-204ENST00000494982 PHF23Q9BUL5 403 aaPredicted RBP20.84■□□□□ 0.93
RAP1A-204ENST00000494982 ABCC9O60706 1549 aa19.85■□□□□ 0.77
RAP1A-204ENST00000494982 FOXD1Q16676 465 aa19.57■□□□□ 0.72
RAP1A-204ENST00000494982 CCDC180Q9P1Z9 1646 aa19.5■□□□□ 0.71
RAP1A-204ENST00000494982 PLPPR3Q6T4P5 718 aa19.17■□□□□ 0.66
RAP1A-204ENST00000494982 DNAJC5BQ9UF47 199 aa18.98■□□□□ 0.63
RAP1A-204ENST00000494982 RB1CC1Q8TDY2 1594 aa18.72■□□□□ 0.59
RAP1A-204ENST00000494982 NACADO15069 1562 aa18.5■□□□□ 0.55
RAP1A-204ENST00000494982 ADRA2BP18089 450 aa18.46■□□□□ 0.55
RAP1A-204ENST00000494982 PPP6R1Q9UPN7 881 aa18.45■□□□□ 0.54
RAP1A-204ENST00000494982 PIAS4Q8N2W9 510 aaPredicted RBP18.44■□□□□ 0.54
RAP1A-204ENST00000494982 PABPN1Q86U42 306 aaKnown RBP eCLIP18.36■□□□□ 0.53
RAP1A-204ENST00000494982 MSH5O43196 834 aa18.34■□□□□ 0.53
RAP1A-204ENST00000494982 UNC13AQ9UPW8 1703 aa18.32■□□□□ 0.52
RAP1A-204ENST00000494982 BICRAQ9NZM4 1560 aa18.25■□□□□ 0.51
RAP1A-204ENST00000494982 MYO15BQ96JP2 1530 aa18.14■□□□□ 0.49
RAP1A-204ENST00000494982 DCAF8L2P0C7V8 631 aa18.14■□□□□ 0.49
RAP1A-204ENST00000494982 SHROOM4Q9ULL8 1493 aa17.95■□□□□ 0.46
RAP1A-204ENST00000494982 CC2D2AQ9P2K1 1620 aa17.94■□□□□ 0.46
RAP1A-204ENST00000494982 CECR2Q9BXF3 1484 aa17.93■□□□□ 0.46
RAP1A-204ENST00000494982 EIF4G1Q04637 1599 aaKnown RBP17.81■□□□□ 0.44
RAP1A-204ENST00000494982 ZCCHC6Q5VYS8 1495 aaKnown RBP17.77■□□□□ 0.44
RAP1A-204ENST00000494982 DCAF1Q9Y4B6 1507 aa17.75■□□□□ 0.43
RAP1A-204ENST00000494982 SCRIBQ14160 1630 aa17.72■□□□□ 0.43
RAP1A-204ENST00000494982 DNAJC5Q9H3Z4 198 aa17.69■□□□□ 0.42
RAP1A-204ENST00000494982 POTEDQ86YR6 584 aa17.34■□□□□ 0.37
RAP1A-204ENST00000494982 CUX2O14529 1486 aa17.3■□□□□ 0.36
RAP1A-204ENST00000494982 ERCC6Q03468 1493 aa17.14■□□□□ 0.33
RAP1A-204ENST00000494982 NCAPD3P42695 1498 aa17.08■□□□□ 0.32
RAP1A-204ENST00000494982 SCAF1Q9H7N4 1312 aaKnown RBP17.05■□□□□ 0.32
RAP1A-204ENST00000494982 ATAD2BQ9ULI0 1458 aa16.98■□□□□ 0.31
RAP1A-204ENST00000494982 NESP48681 1621 aa16.96■□□□□ 0.31
RAP1A-204ENST00000494982 HMGXB3Q12766 1538 aa16.96■□□□□ 0.3
RAP1A-204ENST00000494982 THOC2Q8NI27 1593 aaKnown RBP16.93■□□□□ 0.3
RAP1A-204ENST00000494982 SMARCA2P51531 1590 aa16.89■□□□□ 0.3
RAP1A-204ENST00000494982 SMARCA4P51532 1647 aa16.88■□□□□ 0.29
RAP1A-204ENST00000494982 MAPK8IP2Q13387 824 aaPredicted RBP16.84■□□□□ 0.29
RAP1A-204ENST00000494982 PPP4R3CPQ6ZMV5 832 aa16.79■□□□□ 0.28
RAP1A-204ENST00000494982 BAZ1BQ9UIG0 1483 aaKnown RBP16.78■□□□□ 0.28
RAP1A-204ENST00000494982 LAMC3Q9Y6N6 1575 aa16.77■□□□□ 0.27
RAP1A-204ENST00000494982 DMRT2Q9Y5R5 561 aa16.76■□□□□ 0.27
RAP1A-204ENST00000494982 PEG3Q9GZU2 1588 aa16.74■□□□□ 0.27
RAP1A-204ENST00000494982 KIF21AQ7Z4S6 1674 aa16.73■□□□□ 0.27
RAP1A-204ENST00000494982 TRIM41Q8WV44 630 aa16.71■□□□□ 0.27
RAP1A-204ENST00000494982 BAZ1AQ9NRL2 1556 aaPredicted RBP16.71■□□□□ 0.27
RAP1A-204ENST00000494982 PDS5BQ9NTI5 1447 aa16.64■□□□□ 0.25
RAP1A-204ENST00000494982 WDR62O43379 1518 aa16.58■□□□□ 0.24
RAP1A-204ENST00000494982 MRC2Q9UBG0 1479 aa16.57■□□□□ 0.24
RAP1A-204ENST00000494982 MROH2BQ7Z745 1585 aa16.56■□□□□ 0.24
RAP1A-204ENST00000494982 CADPSQ9ULU8 1353 aa16.51■□□□□ 0.23
RAP1A-204ENST00000494982 CNKSR2Q8WXI2 1034 aa16.45■□□□□ 0.22
RAP1A-204ENST00000494982 CEP164Q9UPV0 1460 aa16.41■□□□□ 0.22
RAP1A-204ENST00000494982 FANCD2Q9BXW9 1451 aa16.35■□□□□ 0.21
RAP1A-204ENST00000494982 NCBP3Q53F19 620 aaKnown RBP16.34■□□□□ 0.21
RAP1A-204ENST00000494982 WIZO95785 1651 aa16.34■□□□□ 0.21
RAP1A-204ENST00000494982 OSCARQ8IYS5 282 aa16.33■□□□□ 0.2
RAP1A-204ENST00000494982 RIMBP3CA6NJZ7 1639 aa16.28■□□□□ 0.2
RAP1A-204ENST00000494982 RIMBP3BA6NNM3 1639 aa16.28■□□□□ 0.2
RAP1A-204ENST00000494982 RIMBP3Q9UFD9 1639 aa16.28■□□□□ 0.2
RAP1A-204ENST00000494982 URB2Q14146 1524 aaKnown RBP16.28■□□□□ 0.2
RAP1A-204ENST00000494982 CFTRP13569 1480 aa16.28■□□□□ 0.2
RAP1A-204ENST00000494982 HOXD11P31277 338 aaPredicted RBP16.22■□□□□ 0.19
RAP1A-204ENST00000494982 RNF216Q9NWF9 866 aaPredicted RBP16.22■□□□□ 0.19
RAP1A-204ENST00000494982 ARHGEF11O15085 1522 aa16.19■□□□□ 0.18
RAP1A-204ENST00000494982 DCAF8L1A6NGE4 600 aa16.16■□□□□ 0.18
RAP1A-204ENST00000494982 TOP2AP11388 1531 aaKnown RBP16.13■□□□□ 0.17
RAP1A-204ENST00000494982 ZNF608Q9ULD9 1512 aaPredicted RBP16.13■□□□□ 0.17
RAP1A-204ENST00000494982 IFT140Q96RY7 1462 aa16.1■□□□□ 0.17
RAP1A-204ENST00000494982 PRDM2Q13029 1718 aa16.08■□□□□ 0.17
RAP1A-204ENST00000494982 RSF1Q96T23 1441 aaPredicted RBP16.05■□□□□ 0.16
RAP1A-204ENST00000494982 EIF4G3O43432 1585 aaKnown RBP16.04■□□□□ 0.16
RAP1A-204ENST00000494982 ARAP1Q96P48 1450 aa16.02■□□□□ 0.15
RAP1A-204ENST00000494982 TOPBP1Q92547 1522 aa16.01■□□□□ 0.15
RAP1A-204ENST00000494982 CHD1O14646 1710 aa15.97■□□□□ 0.15
RAP1A-204ENST00000494982 NPM3O75607 178 aaKnown RBP15.97■□□□□ 0.15
RAP1A-204ENST00000494982 CYB5RLQ6IPT4 315 aa15.97■□□□□ 0.15
RAP1A-204ENST00000494982 TARBP1Q13395 1621 aaKnown RBP15.93■□□□□ 0.14
RAP1A-204ENST00000494982 DNMBPQ6XZF7 1577 aa15.92■□□□□ 0.14
RAP1A-204ENST00000494982 CCDC88BA6NC98 1476 aa15.91■□□□□ 0.14
RAP1A-204ENST00000494982 TRHP20396 242 aaPredicted RBP15.91■□□□□ 0.14
RAP1A-204ENST00000494982 AQRO60306 1485 aaKnown RBP eCLIP15.9■□□□□ 0.14
RAP1A-204ENST00000494982 ABCC8Q09428 1581 aa15.89■□□□□ 0.13
RAP1A-204ENST00000494982 KCNA4P22459 653 aa15.88■□□□□ 0.13
RAP1A-204ENST00000494982 POLA1P09884 1462 aaPredicted RBP15.83■□□□□ 0.12
RAP1A-204ENST00000494982 CLASP1Q7Z460 1538 aa15.83■□□□□ 0.12
RAP1A-204ENST00000494982 FBLN2P98095 1184 aa15.78■□□□□ 0.12
RAP1A-204ENST00000494982 RAD54L2Q9Y4B4 1467 aa15.76■□□□□ 0.11
RAP1A-204ENST00000494982 SNAPC4Q5SXM2 1469 aa15.75■□□□□ 0.11
RAP1A-204ENST00000494982 WDR97A6NE52 1622 aa15.72■□□□□ 0.11
RAP1A-204ENST00000494982 TDRD9Q8NDG6 1382 aaKnown RBP15.72■□□□□ 0.11
RAP1A-204ENST00000494982 SYNJ1O43426 1573 aa15.71■□□□□ 0.11
RAP1A-204ENST00000494982 MAGI1Q96QZ7 1491 aaPredicted RBP15.69■□□□□ 0.1
RAP1A-204ENST00000494982 SOGA1O94964 1423 aa15.68■□□□□ 0.1
RAP1A-204ENST00000494982 FGD5Q6ZNL6 1462 aa15.66■□□□□ 0.1
RAP1A-204ENST00000494982 SYNJ2O15056 1496 aa15.64■□□□□ 0.09
RAP1A-204ENST00000494982 GRIN2BQ13224 1484 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms