RNA–Protein interactions for RNA: ENST00000494862.1

HDLBP-245, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 356 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-245ENST00000494862 NISCHQ9Y2I1 1504 aa25.91■■□□□ 1.74
HDLBP-245ENST00000494862 AEBP2Q6ZN18 517 aaPredicted RBP25.02■■□□□ 1.6
HDLBP-245ENST00000494862 CHIC1Q5VXU3 224 aa24.37■■□□□ 1.49
HDLBP-245ENST00000494862 CCDC180Q9P1Z9 1646 aa22.54■■□□□ 1.2
HDLBP-245ENST00000494862 ZCCHC6Q5VYS8 1495 aaKnown RBP21.77■■□□□ 1.08
HDLBP-245ENST00000494862 PHF23Q9BUL5 403 aaPredicted RBP21.49■■□□□ 1.03
HDLBP-245ENST00000494862 DCAF1Q9Y4B6 1507 aa21.45■■□□□ 1.02
HDLBP-245ENST00000494862 DCAF8L2P0C7V8 631 aa21.35■■□□□ 1.01
HDLBP-245ENST00000494862 ABCC9O60706 1549 aa21.27■■□□□ 1
HDLBP-245ENST00000494862 MYO15BQ96JP2 1530 aa21.19■□□□□ 0.98
HDLBP-245ENST00000494862 SENP3Q9H4L4 574 aaPredicted RBP21.14■□□□□ 0.97
HDLBP-245ENST00000494862 SHROOM4Q9ULL8 1493 aa21.12■□□□□ 0.97
HDLBP-245ENST00000494862 NACADO15069 1562 aa21.02■□□□□ 0.96
HDLBP-245ENST00000494862 RB1CC1Q8TDY2 1594 aa20.81■□□□□ 0.92
HDLBP-245ENST00000494862 SCRIBQ14160 1630 aa20.71■□□□□ 0.91
HDLBP-245ENST00000494862 SUPT5HO00267 1087 aaKnown RBP20.36■□□□□ 0.85
HDLBP-245ENST00000494862 UNC13AQ9UPW8 1703 aa20.29■□□□□ 0.84
HDLBP-245ENST00000494862 BICRAQ9NZM4 1560 aa20.17■□□□□ 0.82
HDLBP-245ENST00000494862 RSF1Q96T23 1441 aaPredicted RBP20.12■□□□□ 0.81
HDLBP-245ENST00000494862 DNAJC5BQ9UF47 199 aa20.12■□□□□ 0.81
HDLBP-245ENST00000494862 CECR2Q9BXF3 1484 aa20.11■□□□□ 0.81
HDLBP-245ENST00000494862 PABPN1Q86U42 306 aaKnown RBP eCLIP20.09■□□□□ 0.818e-13■□□□□ 10.3
HDLBP-245ENST00000494862 MROH2BQ7Z745 1585 aa20■□□□□ 0.79
HDLBP-245ENST00000494862 BAZ1AQ9NRL2 1556 aaPredicted RBP20■□□□□ 0.79
HDLBP-245ENST00000494862 SMARCA4P51532 1647 aa19.87■□□□□ 0.77
HDLBP-245ENST00000494862 WIZO95785 1651 aa19.8■□□□□ 0.76
HDLBP-245ENST00000494862 PLPPR3Q6T4P5 718 aa19.78■□□□□ 0.76
HDLBP-245ENST00000494862 FOXD1Q16676 465 aa19.68■□□□□ 0.74
HDLBP-245ENST00000494862 PEG3Q9GZU2 1588 aa19.66■□□□□ 0.74
HDLBP-245ENST00000494862 TOP2AP11388 1531 aaKnown RBP19.65■□□□□ 0.74
HDLBP-245ENST00000494862 ATAD2BQ9ULI0 1458 aa19.58■□□□□ 0.72
HDLBP-245ENST00000494862 SMARCA2P51531 1590 aa19.57■□□□□ 0.72
HDLBP-245ENST00000494862 EIF4G1Q04637 1599 aaKnown RBP19.55■□□□□ 0.72
HDLBP-245ENST00000494862 CCDC88BA6NC98 1476 aa19.45■□□□□ 0.7
HDLBP-245ENST00000494862 BAZ1BQ9UIG0 1483 aaKnown RBP19.45■□□□□ 0.7
HDLBP-245ENST00000494862 NCAPD3P42695 1498 aa19.41■□□□□ 0.7
HDLBP-245ENST00000494862 HMGXB3Q12766 1538 aa19.37■□□□□ 0.69
HDLBP-245ENST00000494862 CC2D2AQ9P2K1 1620 aa19.24■□□□□ 0.67
HDLBP-245ENST00000494862 TRIM41Q8WV44 630 aa19.17■□□□□ 0.66
HDLBP-245ENST00000494862 ABCC8Q09428 1581 aa19■□□□□ 0.63
HDLBP-245ENST00000494862 CFTRP13569 1480 aa18.98■□□□□ 0.63
HDLBP-245ENST00000494862 PPP6R1Q9UPN7 881 aa18.97■□□□□ 0.63
HDLBP-245ENST00000494862 ADRA2BP18089 450 aa18.94■□□□□ 0.62
HDLBP-245ENST00000494862 WRNQ14191 1432 aaPredicted RBP eCLIP18.93■□□□□ 0.62
HDLBP-245ENST00000494862 CADPSQ9ULU8 1353 aa18.93■□□□□ 0.62
HDLBP-245ENST00000494862 SYNJ1O43426 1573 aa18.81■□□□□ 0.6
HDLBP-245ENST00000494862 PRDM2Q13029 1718 aa18.8■□□□□ 0.6
HDLBP-245ENST00000494862 FAM9AQ8IZU1 332 aaPredicted RBP18.79■□□□□ 0.6
HDLBP-245ENST00000494862 LOC105371045A0A1W2PR82 267 aa18.78■□□□□ 0.6
HDLBP-245ENST00000494862 TOP2BQ02880 1626 aa18.75■□□□□ 0.59
HDLBP-245ENST00000494862 EEA1Q15075 1411 aa18.74■□□□□ 0.59
HDLBP-245ENST00000494862 BIVM-ERCC5R4GMW8 1640 aa18.72■□□□□ 0.59
HDLBP-245ENST00000494862 LAMC3Q9Y6N6 1575 aa18.72■□□□□ 0.59
HDLBP-245ENST00000494862 DNAJC5Q9H3Z4 198 aa18.71■□□□□ 0.59
HDLBP-245ENST00000494862 CUX1P39880 1505 aa18.7■□□□□ 0.58
HDLBP-245ENST00000494862 SOGA1O94964 1423 aa18.7■□□□□ 0.58
HDLBP-245ENST00000494862 FANCD2Q9BXW9 1451 aa18.69■□□□□ 0.58
HDLBP-245ENST00000494862 NESP48681 1621 aa18.67■□□□□ 0.58
HDLBP-245ENST00000494862 RUSC2Q8N2Y8 1516 aa18.61■□□□□ 0.57
HDLBP-245ENST00000494862 PDS5BQ9NTI5 1447 aa18.61■□□□□ 0.57
HDLBP-245ENST00000494862 CSRNP3Q8WYN3 585 aa18.61■□□□□ 0.57
HDLBP-245ENST00000494862 CEP164Q9UPV0 1460 aa18.57■□□□□ 0.56
HDLBP-245ENST00000494862 PIAS4Q8N2W9 510 aaPredicted RBP18.56■□□□□ 0.56
HDLBP-245ENST00000494862 DNMBPQ6XZF7 1577 aa18.53■□□□□ 0.56
HDLBP-245ENST00000494862 FGD5Q6ZNL6 1462 aa18.49■□□□□ 0.55
HDLBP-245ENST00000494862 TOPBP1Q92547 1522 aa18.49■□□□□ 0.55
HDLBP-245ENST00000494862 EHMT2Q96KQ7 1210 aa18.48■□□□□ 0.55
HDLBP-245ENST00000494862 KIF27Q86VH2 1401 aa18.48■□□□□ 0.55
HDLBP-245ENST00000494862 GOLGA3Q08378 1498 aa18.45■□□□□ 0.54
HDLBP-245ENST00000494862 URB2Q14146 1524 aaKnown RBP18.44■□□□□ 0.54
HDLBP-245ENST00000494862 KIF21BO75037 1637 aa18.42■□□□□ 0.54
HDLBP-245ENST00000494862 TNIKQ9UKE5 1360 aa18.42■□□□□ 0.54
HDLBP-245ENST00000494862 KIF21AQ7Z4S6 1674 aa18.41■□□□□ 0.54
HDLBP-245ENST00000494862 CUX2O14529 1486 aa18.39■□□□□ 0.54
HDLBP-245ENST00000494862 POLA1P09884 1462 aaPredicted RBP18.39■□□□□ 0.54
HDLBP-245ENST00000494862 ABCA10Q8WWZ4 1543 aa18.35■□□□□ 0.53
HDLBP-245ENST00000494862 PRXQ9BXM0 1461 aa18.35■□□□□ 0.53
HDLBP-245ENST00000494862 MRC2Q9UBG0 1479 aa18.35■□□□□ 0.53
HDLBP-245ENST00000494862 UBTFP17480 764 aaKnown RBP18.35■□□□□ 0.53
HDLBP-245ENST00000494862 RAD54L2Q9Y4B4 1467 aa18.33■□□□□ 0.53
HDLBP-245ENST00000494862 RAPGEF2Q9Y4G8 1499 aa18.32■□□□□ 0.52
HDLBP-245ENST00000494862 ERICH3Q5RHP9 1530 aa18.31■□□□□ 0.52
HDLBP-245ENST00000494862 IGF1RP08069 1367 aa18.3■□□□□ 0.52
HDLBP-245ENST00000494862 CEP162Q5TB80 1403 aa18.28■□□□□ 0.52
HDLBP-245ENST00000494862 ERCC6Q03468 1493 aa18.25■□□□□ 0.51
HDLBP-245ENST00000494862 WDR62O43379 1518 aa18.23■□□□□ 0.51
HDLBP-245ENST00000494862 WDR97A6NE52 1622 aa18.23■□□□□ 0.51
HDLBP-245ENST00000494862 CARMIL1Q5VZK9 1371 aa18.21■□□□□ 0.51
HDLBP-245ENST00000494862 TARBP1Q13395 1621 aaKnown RBP18.18■□□□□ 0.5
HDLBP-245ENST00000494862 TDRD9Q8NDG6 1382 aaKnown RBP18.16■□□□□ 0.5
HDLBP-245ENST00000494862 ABCA5Q8WWZ7 1642 aa18.16■□□□□ 0.5
HDLBP-245ENST00000494862 GAPVD1Q14C86 1478 aa18.15■□□□□ 0.5
HDLBP-245ENST00000494862 CLIP1P30622 1438 aa18.15■□□□□ 0.5
HDLBP-245ENST00000494862 IFT140Q96RY7 1462 aa18.14■□□□□ 0.5
HDLBP-245ENST00000494862 THOC2Q8NI27 1593 aaKnown RBP18.13■□□□□ 0.49
HDLBP-245ENST00000494862 CUL7Q14999 1698 aa18.12■□□□□ 0.49
HDLBP-245ENST00000494862 MSH5O43196 834 aa18.07■□□□□ 0.48
HDLBP-245ENST00000494862 AQRO60306 1485 aaKnown RBP eCLIP18.03■□□□□ 0.483e-7■■■■■ 64.1
HDLBP-245ENST00000494862 GRIN2BQ13224 1484 aa18.01■□□□□ 0.47
HDLBP-245ENST00000494862 ZNF608Q9ULD9 1512 aaPredicted RBP18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms