RNA–Protein interactions for RNA: ENST00000494829.1

RUNX1-217, Transcript of runt related transcription factor 1, humanhuman

TSL 1 (best)

Gene RUNX1, Length 3,622 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-217ENST00000494829 NISCHQ9Y2I1 1504 aa12.67□□□□□ -0.38
RUNX1-217ENST00000494829 CHIC1Q5VXU3 224 aa12.08□□□□□ -0.48
RUNX1-217ENST00000494829 AEBP2Q6ZN18 517 aaPredicted RBP11.91□□□□□ -0.5
RUNX1-217ENST00000494829 CCDC180Q9P1Z9 1646 aa10.85□□□□□ -0.67
RUNX1-217ENST00000494829 PHF23Q9BUL5 403 aaPredicted RBP10.71□□□□□ -0.69
RUNX1-217ENST00000494829 ZCCHC6Q5VYS8 1495 aaKnown RBP10.69□□□□□ -0.7
RUNX1-217ENST00000494829 SHROOM4Q9ULL8 1493 aa10.68□□□□□ -0.7
RUNX1-217ENST00000494829 DCAF8L2P0C7V8 631 aa10.48□□□□□ -0.73
RUNX1-217ENST00000494829 DCAF1Q9Y4B6 1507 aa10.35□□□□□ -0.75
RUNX1-217ENST00000494829 SUPT5HO00267 1087 aaKnown RBP10.3□□□□□ -0.76
RUNX1-217ENST00000494829 ABCC9O60706 1549 aa10.27□□□□□ -0.77
RUNX1-217ENST00000494829 SCRIBQ14160 1630 aa10.19□□□□□ -0.78
RUNX1-217ENST00000494829 MYO15BQ96JP2 1530 aa10.11□□□□□ -0.79
RUNX1-217ENST00000494829 NACADO15069 1562 aa10.05□□□□□ -0.8
RUNX1-217ENST00000494829 CECR2Q9BXF3 1484 aa9.97□□□□□ -0.81
RUNX1-217ENST00000494829 RSF1Q96T23 1441 aaPredicted RBP9.96□□□□□ -0.81
RUNX1-217ENST00000494829 UNC13AQ9UPW8 1703 aa9.94□□□□□ -0.82
RUNX1-217ENST00000494829 SENP3Q9H4L4 574 aaPredicted RBP9.94□□□□□ -0.82
RUNX1-217ENST00000494829 RB1CC1Q8TDY2 1594 aa9.92□□□□□ -0.82
RUNX1-217ENST00000494829 MROH2BQ7Z745 1585 aa9.89□□□□□ -0.83
RUNX1-217ENST00000494829 PLPPR3Q6T4P5 718 aa9.89□□□□□ -0.83
RUNX1-217ENST00000494829 WIZO95785 1651 aa9.84□□□□□ -0.83
RUNX1-217ENST00000494829 BICRAQ9NZM4 1560 aa9.8□□□□□ -0.84
RUNX1-217ENST00000494829 PABPN1Q86U42 306 aaKnown RBP eCLIP9.78□□□□□ -0.84
RUNX1-217ENST00000494829 SMARCA4P51532 1647 aa9.71□□□□□ -0.85
RUNX1-217ENST00000494829 BAZ1AQ9NRL2 1556 aaPredicted RBP9.7□□□□□ -0.86
RUNX1-217ENST00000494829 LOC105371045A0A1W2PR82 267 aa9.69□□□□□ -0.86
RUNX1-217ENST00000494829 EIF4G1Q04637 1599 aaKnown RBP9.65□□□□□ -0.86
RUNX1-217ENST00000494829 TOP2AP11388 1531 aaKnown RBP9.61□□□□□ -0.87
RUNX1-217ENST00000494829 SMARCA2P51531 1590 aa9.6□□□□□ -0.87
RUNX1-217ENST00000494829 CCDC88BA6NC98 1476 aa9.6□□□□□ -0.87
RUNX1-217ENST00000494829 TRIM41Q8WV44 630 aa9.55□□□□□ -0.88
RUNX1-217ENST00000494829 ABCC8Q09428 1581 aa9.55□□□□□ -0.88
RUNX1-217ENST00000494829 FAM9AQ8IZU1 332 aaPredicted RBP9.54□□□□□ -0.88
RUNX1-217ENST00000494829 PEG3Q9GZU2 1588 aa9.52□□□□□ -0.88
RUNX1-217ENST00000494829 EHMT2Q96KQ7 1210 aa9.51□□□□□ -0.89
RUNX1-217ENST00000494829 ATAD2BQ9ULI0 1458 aa9.5□□□□□ -0.89
RUNX1-217ENST00000494829 BAZ1BQ9UIG0 1483 aaKnown RBP9.41□□□□□ -0.9
RUNX1-217ENST00000494829 RUSC2Q8N2Y8 1516 aa9.41□□□□□ -0.9
RUNX1-217ENST00000494829 SOGA1O94964 1423 aa9.39□□□□□ -0.91
RUNX1-217ENST00000494829 PCGF6Q9BYE7 350 aa9.38□□□□□ -0.91
RUNX1-217ENST00000494829 SYNJ1O43426 1573 aa9.37□□□□□ -0.91
RUNX1-217ENST00000494829 NCAPD3P42695 1498 aa9.32□□□□□ -0.92
RUNX1-217ENST00000494829 WRNQ14191 1432 aaPredicted RBP eCLIP9.3□□□□□ -0.92
RUNX1-217ENST00000494829 HMGXB3Q12766 1538 aa9.3□□□□□ -0.92
RUNX1-217ENST00000494829 PPARGC1BQ86YN6 1023 aaKnown RBP9.27□□□□□ -0.93
RUNX1-217ENST00000494829 CC2D2AQ9P2K1 1620 aa9.26□□□□□ -0.93
RUNX1-217ENST00000494829 DNAJC5BQ9UF47 199 aa9.23□□□□□ -0.93
RUNX1-217ENST00000494829 TOP2BQ02880 1626 aa9.21□□□□□ -0.93
RUNX1-217ENST00000494829 CUX1P39880 1505 aa9.21□□□□□ -0.93
RUNX1-217ENST00000494829 HRCP23327 699 aa9.21□□□□□ -0.93
RUNX1-217ENST00000494829 CFTRP13569 1480 aa9.2□□□□□ -0.94
RUNX1-217ENST00000494829 CSRNP3Q8WYN3 585 aa9.2□□□□□ -0.94
RUNX1-217ENST00000494829 BIVM-ERCC5R4GMW8 1640 aa9.2□□□□□ -0.94
RUNX1-217ENST00000494829 ADRA2BP18089 450 aa9.2□□□□□ -0.94
RUNX1-217ENST00000494829 FOXD1Q16676 465 aa9.2□□□□□ -0.94
RUNX1-217ENST00000494829 TRIM26Q12899 539 aaPredicted RBP9.18□□□□□ -0.94
RUNX1-217ENST00000494829 PPP6R1Q9UPN7 881 aa9.18□□□□□ -0.94
RUNX1-217ENST00000494829 CEP162Q5TB80 1403 aa9.18□□□□□ -0.94
RUNX1-217ENST00000494829 RAPGEF2Q9Y4G8 1499 aa9.16□□□□□ -0.94
RUNX1-217ENST00000494829 TNIKQ9UKE5 1360 aa9.14□□□□□ -0.95
RUNX1-217ENST00000494829 PRDM2Q13029 1718 aa9.14□□□□□ -0.95
RUNX1-217ENST00000494829 NESP48681 1621 aa9.14□□□□□ -0.95
RUNX1-217ENST00000494829 EEA1Q15075 1411 aa9.13□□□□□ -0.95
RUNX1-217ENST00000494829 TTBK1Q5TCY1 1321 aaPredicted RBP9.13□□□□□ -0.95
RUNX1-217ENST00000494829 KIF21BO75037 1637 aa9.13□□□□□ -0.95
RUNX1-217ENST00000494829 GOLGA3Q08378 1498 aa9.12□□□□□ -0.95
RUNX1-217ENST00000494829 UBTFP17480 764 aaKnown RBP9.11□□□□□ -0.95
RUNX1-217ENST00000494829 CADPSQ9ULU8 1353 aa9.11□□□□□ -0.95
RUNX1-217ENST00000494829 CEP164Q9UPV0 1460 aa9.08□□□□□ -0.96
RUNX1-217ENST00000494829 RANGAP1P46060 587 aaPredicted RBP9.07□□□□□ -0.96
RUNX1-217ENST00000494829 PRXQ9BXM0 1461 aa9.06□□□□□ -0.96
RUNX1-217ENST00000494829 FGD5Q6ZNL6 1462 aa9.04□□□□□ -0.96
RUNX1-217ENST00000494829 FANCD2Q9BXW9 1451 aa9.04□□□□□ -0.96
RUNX1-217ENST00000494829 CLIP1P30622 1438 aa9.02□□□□□ -0.97
RUNX1-217ENST00000494829 RAD54L2Q9Y4B4 1467 aa9.02□□□□□ -0.97
RUNX1-217ENST00000494829 CUX2O14529 1486 aa9.01□□□□□ -0.97
RUNX1-217ENST00000494829 KCNA4P22459 653 aa9□□□□□ -0.97
RUNX1-217ENST00000494829 ARAP1Q96P48 1450 aa8.99□□□□□ -0.97
RUNX1-217ENST00000494829 ERICH3Q5RHP9 1530 aa8.99□□□□□ -0.97
RUNX1-217ENST00000494829 IGF1RP08069 1367 aa8.99□□□□□ -0.97
RUNX1-217ENST00000494829 KIF27Q86VH2 1401 aa8.99□□□□□ -0.97
RUNX1-217ENST00000494829 URB2Q14146 1524 aaKnown RBP8.99□□□□□ -0.97
RUNX1-217ENST00000494829 TOPBP1Q92547 1522 aa8.98□□□□□ -0.97
RUNX1-217ENST00000494829 KIF21AQ7Z4S6 1674 aa8.98□□□□□ -0.97
RUNX1-217ENST00000494829 POLA1P09884 1462 aaPredicted RBP8.98□□□□□ -0.97
RUNX1-217ENST00000494829 DNMBPQ6XZF7 1577 aa8.96□□□□□ -0.97
RUNX1-217ENST00000494829 VPS8Q8N3P4 1428 aa8.96□□□□□ -0.97
RUNX1-217ENST00000494829 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.96□□□□□ -0.98
RUNX1-217ENST00000494829 LAMC3Q9Y6N6 1575 aa8.94□□□□□ -0.98
RUNX1-217ENST00000494829 ARHGAP35Q9NRY4 1499 aa8.94□□□□□ -0.98
RUNX1-217ENST00000494829 WDR97A6NE52 1622 aa8.93□□□□□ -0.98
RUNX1-217ENST00000494829 KANK4Q5T7N3 995 aaPredicted RBP8.91□□□□□ -0.98
RUNX1-217ENST00000494829 ABCA10Q8WWZ4 1543 aa8.91□□□□□ -0.98
RUNX1-217ENST00000494829 CARMIL1Q5VZK9 1371 aa8.9□□□□□ -0.98
RUNX1-217ENST00000494829 TDRD9Q8NDG6 1382 aaKnown RBP8.88□□□□□ -0.99
RUNX1-217ENST00000494829 ABCA5Q8WWZ7 1642 aa8.87□□□□□ -0.99
RUNX1-217ENST00000494829 TARBP1Q13395 1621 aaKnown RBP8.86□□□□□ -0.99
RUNX1-217ENST00000494829 P3H3Q8IVL6 736 aa8.84□□□□□ -0.99
RUNX1-217ENST00000494829 HNRNPUL2Q1KMD3 747 aaKnown RBP8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms