RNA–Protein interactions for RNA: ENST00000493658.2

ARID1B-208, Transcript of AT-rich interaction domain 1B, humanhuman

TSL 3

Gene ARID1B, Length 974 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARID1B-208ENST00000493658 NISCHQ9Y2I1 1504 aa29.75■■■□□ 2.35
ARID1B-208ENST00000493658 ABCC9O60706 1549 aa26.26■■□□□ 1.79
ARID1B-208ENST00000493658 DNAJC5BQ9UF47 199 aa26.11■■□□□ 1.77
ARID1B-208ENST00000493658 CCDC180Q9P1Z9 1646 aa25.74■■□□□ 1.71
ARID1B-208ENST00000493658 DNAJC5Q9H3Z4 198 aa25.19■■□□□ 1.62
ARID1B-208ENST00000493658 ZCCHC6Q5VYS8 1495 aaKnown RBP25.15■■□□□ 1.62
ARID1B-208ENST00000493658 SHROOM4Q9ULL8 1493 aa24.66■■□□□ 1.54
ARID1B-208ENST00000493658 DCAF1Q9Y4B6 1507 aa24.64■■□□□ 1.53
ARID1B-208ENST00000493658 RB1CC1Q8TDY2 1594 aa24.29■■□□□ 1.48
ARID1B-208ENST00000493658 DCAF8L2P0C7V8 631 aa24.21■■□□□ 1.47
ARID1B-208ENST00000493658 PABPN1Q86U42 306 aaKnown RBP eCLIP24.19■■□□□ 1.46
ARID1B-208ENST00000493658 MYO15BQ96JP2 1530 aa24.08■■□□□ 1.45
ARID1B-208ENST00000493658 SUPT5HO00267 1087 aaKnown RBP24.03■■□□□ 1.44
ARID1B-208ENST00000493658 CECR2Q9BXF3 1484 aa23.86■■□□□ 1.41
ARID1B-208ENST00000493658 NACADO15069 1562 aa23.74■■□□□ 1.39
ARID1B-208ENST00000493658 SCRIBQ14160 1630 aa23.7■■□□□ 1.38
ARID1B-208ENST00000493658 UNC13AQ9UPW8 1703 aa23.65■■□□□ 1.38
ARID1B-208ENST00000493658 BICRAQ9NZM4 1560 aa23.65■■□□□ 1.38
ARID1B-208ENST00000493658 CC2D2AQ9P2K1 1620 aa23.64■■□□□ 1.38
ARID1B-208ENST00000493658 CHIC1Q5VXU3 224 aa23.39■■□□□ 1.33
ARID1B-208ENST00000493658 TRIM41Q8WV44 630 aa23.37■■□□□ 1.33
ARID1B-208ENST00000493658 CUX2O14529 1486 aa23.36■■□□□ 1.33
ARID1B-208ENST00000493658 RSF1Q96T23 1441 aaPredicted RBP23.3■■□□□ 1.32
ARID1B-208ENST00000493658 EIF4G1Q04637 1599 aaKnown RBP23.2■■□□□ 1.3
ARID1B-208ENST00000493658 MROH2BQ7Z745 1585 aa23■■□□□ 1.27
ARID1B-208ENST00000493658 BAZ1AQ9NRL2 1556 aaPredicted RBP22.93■■□□□ 1.26
ARID1B-208ENST00000493658 WIZO95785 1651 aa22.88■■□□□ 1.25
ARID1B-208ENST00000493658 ERCC6Q03468 1493 aa22.81■■□□□ 1.24
ARID1B-208ENST00000493658 SMARCA4P51532 1647 aa22.77■■□□□ 1.24
ARID1B-208ENST00000493658 TOP2AP11388 1531 aaKnown RBP22.68■■□□□ 1.22
ARID1B-208ENST00000493658 SMARCA2P51531 1590 aa22.48■■□□□ 1.19
ARID1B-208ENST00000493658 LOC105371045A0A1W2PR82 267 aa22.47■■□□□ 1.19
ARID1B-208ENST00000493658 PEG3Q9GZU2 1588 aa22.46■■□□□ 1.19
ARID1B-208ENST00000493658 AEBP2Q6ZN18 517 aaPredicted RBP22.44■■□□□ 1.18
ARID1B-208ENST00000493658 CCDC88BA6NC98 1476 aa22.41■■□□□ 1.18
ARID1B-208ENST00000493658 THOC2Q8NI27 1593 aaKnown RBP22.21■■□□□ 1.15
ARID1B-208ENST00000493658 PCGF6Q9BYE7 350 aa22.17■■□□□ 1.14
ARID1B-208ENST00000493658 ABCC8Q09428 1581 aa22.16■■□□□ 1.14
ARID1B-208ENST00000493658 ATAD2BQ9ULI0 1458 aa22.16■■□□□ 1.14
ARID1B-208ENST00000493658 HRCP23327 699 aa22.15■■□□□ 1.14
ARID1B-208ENST00000493658 FAM9AQ8IZU1 332 aaPredicted RBP22.15■■□□□ 1.14
ARID1B-208ENST00000493658 BAZ1BQ9UIG0 1483 aaKnown RBP22.1■■□□□ 1.13
ARID1B-208ENST00000493658 NESP48681 1621 aa22.09■■□□□ 1.13
ARID1B-208ENST00000493658 TRIM26Q12899 539 aaPredicted RBP22.05■■□□□ 1.12
ARID1B-208ENST00000493658 EEA1Q15075 1411 aa22.01■■□□□ 1.11
ARID1B-208ENST00000493658 OSCARQ8IYS5 282 aa21.98■■□□□ 1.11
ARID1B-208ENST00000493658 NCAPD3P42695 1498 aa21.96■■□□□ 1.11
ARID1B-208ENST00000493658 HMGXB3Q12766 1538 aa21.96■■□□□ 1.11
ARID1B-208ENST00000493658 WRNQ14191 1432 aaPredicted RBP eCLIP21.92■■□□□ 1.1
ARID1B-208ENST00000493658 RIMBP3CA6NJZ7 1639 aa21.87■■□□□ 1.09
ARID1B-208ENST00000493658 RIMBP3BA6NNM3 1639 aa21.87■■□□□ 1.09
ARID1B-208ENST00000493658 RIMBP3Q9UFD9 1639 aa21.87■■□□□ 1.09
ARID1B-208ENST00000493658 TRHP20396 242 aaPredicted RBP21.86■■□□□ 1.09
ARID1B-208ENST00000493658 SYNJ1O43426 1573 aa21.85■■□□□ 1.09
ARID1B-208ENST00000493658 SOGA1O94964 1423 aa21.84■■□□□ 1.09
ARID1B-208ENST00000493658 ILDR1Q86SU0 546 aaPredicted RBP21.83■■□□□ 1.09
ARID1B-208ENST00000493658 EHMT2Q96KQ7 1210 aa21.79■■□□□ 1.08
ARID1B-208ENST00000493658 TNIKQ9UKE5 1360 aa21.76■■□□□ 1.07
ARID1B-208ENST00000493658 GOLGA3Q08378 1498 aa21.74■■□□□ 1.07
ARID1B-208ENST00000493658 KIF21BO75037 1637 aa21.73■■□□□ 1.07
ARID1B-208ENST00000493658 BIVM-ERCC5R4GMW8 1640 aa21.73■■□□□ 1.07
ARID1B-208ENST00000493658 CSRNP3Q8WYN3 585 aa21.73■■□□□ 1.07
ARID1B-208ENST00000493658 TOP2BQ02880 1626 aa21.73■■□□□ 1.07
ARID1B-208ENST00000493658 RUSC2Q8N2Y8 1516 aa21.72■■□□□ 1.07
ARID1B-208ENST00000493658 KIF21AQ7Z4S6 1674 aa21.72■■□□□ 1.07
ARID1B-208ENST00000493658 CEP162Q5TB80 1403 aa21.7■■□□□ 1.06
ARID1B-208ENST00000493658 LAMC3Q9Y6N6 1575 aa21.7■■□□□ 1.06
ARID1B-208ENST00000493658 CEP164Q9UPV0 1460 aa21.66■■□□□ 1.06
ARID1B-208ENST00000493658 PRDM2Q13029 1718 aa21.66■■□□□ 1.06
ARID1B-208ENST00000493658 ARHGEF11O15085 1522 aa21.65■■□□□ 1.06
ARID1B-208ENST00000493658 PDS5BQ9NTI5 1447 aa21.64■■□□□ 1.06
ARID1B-208ENST00000493658 ZEB1P37275 1124 aaPredicted RBP21.58■■□□□ 1.05
ARID1B-208ENST00000493658 CYB5RLQ6IPT4 315 aa21.57■■□□□ 1.04
ARID1B-208ENST00000493658 CFTRP13569 1480 aa21.56■■□□□ 1.04
ARID1B-208ENST00000493658 WDR62O43379 1518 aa21.55■■□□□ 1.04
ARID1B-208ENST00000493658 MRC2Q9UBG0 1479 aa21.55■■□□□ 1.04
ARID1B-208ENST00000493658 UBTFP17480 764 aaKnown RBP21.5■■□□□ 1.03
ARID1B-208ENST00000493658 CUX1P39880 1505 aa21.48■■□□□ 1.03
ARID1B-208ENST00000493658 PPARGC1BQ86YN6 1023 aaKnown RBP21.46■■□□□ 1.03
ARID1B-208ENST00000493658 ERICH3Q5RHP9 1530 aa21.45■■□□□ 1.02
ARID1B-208ENST00000493658 RAPGEF2Q9Y4G8 1499 aa21.39■■□□□ 1.01
ARID1B-208ENST00000493658 CLIP1P30622 1438 aa21.38■■□□□ 1.01
ARID1B-208ENST00000493658 PRXQ9BXM0 1461 aa21.34■■□□□ 1.01
ARID1B-208ENST00000493658 ARAP1Q96P48 1450 aa21.33■■□□□ 1.01
ARID1B-208ENST00000493658 CADPSQ9ULU8 1353 aa21.33■■□□□ 1
ARID1B-208ENST00000493658 KIF27Q86VH2 1401 aa21.32■■□□□ 1
ARID1B-208ENST00000493658 VPS8Q8N3P4 1428 aa21.29■■□□□ 1
ARID1B-208ENST00000493658 FGD5Q6ZNL6 1462 aa21.13■□□□□ 0.97
ARID1B-208ENST00000493658 FANCD2Q9BXW9 1451 aa21.13■□□□□ 0.97
ARID1B-208ENST00000493658 DNMBPQ6XZF7 1577 aa21.12■□□□□ 0.97
ARID1B-208ENST00000493658 TTBK1Q5TCY1 1321 aaPredicted RBP21.06■□□□□ 0.96
ARID1B-208ENST00000493658 APLP2Q06481 763 aa21.06■□□□□ 0.96
ARID1B-208ENST00000493658 CCER1Q8TC90 406 aaPredicted RBP21.06■□□□□ 0.96
ARID1B-208ENST00000493658 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.02■□□□□ 0.96
ARID1B-208ENST00000493658 IGF1RP08069 1367 aa21.01■□□□□ 0.95
ARID1B-208ENST00000493658 TOPBP1Q92547 1522 aa20.99■□□□□ 0.95
ARID1B-208ENST00000493658 ABCA10Q8WWZ4 1543 aa20.97■□□□□ 0.95
ARID1B-208ENST00000493658 ARHGAP35Q9NRY4 1499 aa20.96■□□□□ 0.95
ARID1B-208ENST00000493658 CARMIL1Q5VZK9 1371 aa20.94■□□□□ 0.94
ARID1B-208ENST00000493658 CUL7Q14999 1698 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms