RNA–Protein interactions for RNA: ENST00000493253.5

KRT17-204, Transcript of keratin 17, humanhuman

TSL 2

Gene KRT17, Length 1,834 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT17-204ENST00000493253 NISCHQ9Y2I1 1504 aa34.91■■■■□ 3.18
KRT17-204ENST00000493253 CCDC180Q9P1Z9 1646 aa30.08■■■□□ 2.41
KRT17-204ENST00000493253 ZCCHC6Q5VYS8 1495 aaKnown RBP29.49■■■□□ 2.31
KRT17-204ENST00000493253 SHROOM4Q9ULL8 1493 aa29.12■■■□□ 2.25
KRT17-204ENST00000493253 ABCC9O60706 1549 aa28.93■■■□□ 2.22
KRT17-204ENST00000493253 DCAF1Q9Y4B6 1507 aa28.84■■■□□ 2.21
KRT17-204ENST00000493253 DCAF8L2P0C7V8 631 aa28.7■■■□□ 2.18
KRT17-204ENST00000493253 SUPT5HO00267 1087 aaKnown RBP28.41■■■□□ 2.14
KRT17-204ENST00000493253 MYO15BQ96JP2 1530 aa28.19■■■□□ 2.1
KRT17-204ENST00000493253 NACADO15069 1562 aa27.84■■■□□ 2.05
KRT17-204ENST00000493253 SCRIBQ14160 1630 aa27.84■■■□□ 2.05
KRT17-204ENST00000493253 RB1CC1Q8TDY2 1594 aa27.71■■■□□ 2.03
KRT17-204ENST00000493253 CHIC1Q5VXU3 224 aa27.53■■■□□ 2
KRT17-204ENST00000493253 RSF1Q96T23 1441 aaPredicted RBP27.39■■□□□ 1.97
KRT17-204ENST00000493253 UNC13AQ9UPW8 1703 aa27.21■■□□□ 1.95
KRT17-204ENST00000493253 CECR2Q9BXF3 1484 aa27.07■■□□□ 1.92
KRT17-204ENST00000493253 MROH2BQ7Z745 1585 aa27.02■■□□□ 1.92
KRT17-204ENST00000493253 PABPN1Q86U42 306 aaKnown RBP eCLIP27.01■■□□□ 1.91
KRT17-204ENST00000493253 BICRAQ9NZM4 1560 aa26.97■■□□□ 1.91
KRT17-204ENST00000493253 BAZ1AQ9NRL2 1556 aaPredicted RBP26.92■■□□□ 1.9
KRT17-204ENST00000493253 WIZO95785 1651 aa26.85■■□□□ 1.89
KRT17-204ENST00000493253 DNAJC5BQ9UF47 199 aa26.74■■□□□ 1.87
KRT17-204ENST00000493253 SMARCA4P51532 1647 aa26.69■■□□□ 1.86
KRT17-204ENST00000493253 TRIM41Q8WV44 630 aa26.64■■□□□ 1.85
KRT17-204ENST00000493253 TOP2AP11388 1531 aaKnown RBP26.59■■□□□ 1.85
KRT17-204ENST00000493253 LOC105371045A0A1W2PR82 267 aa26.53■■□□□ 1.84
KRT17-204ENST00000493253 EIF4G1Q04637 1599 aaKnown RBP26.43■■□□□ 1.82
KRT17-204ENST00000493253 SMARCA2P51531 1590 aa26.36■■□□□ 1.81
KRT17-204ENST00000493253 CCDC88BA6NC98 1476 aa26.32■■□□□ 1.8
KRT17-204ENST00000493253 PEG3Q9GZU2 1588 aa26.29■■□□□ 1.8
KRT17-204ENST00000493253 FAM9AQ8IZU1 332 aaPredicted RBP26.2■■□□□ 1.78
KRT17-204ENST00000493253 PCGF6Q9BYE7 350 aa26.18■■□□□ 1.78
KRT17-204ENST00000493253 CC2D2AQ9P2K1 1620 aa26.17■■□□□ 1.78
KRT17-204ENST00000493253 ATAD2BQ9ULI0 1458 aa26.05■■□□□ 1.76
KRT17-204ENST00000493253 HRCP23327 699 aa26.04■■□□□ 1.76
KRT17-204ENST00000493253 ABCC8Q09428 1581 aa26.04■■□□□ 1.76
KRT17-204ENST00000493253 BAZ1BQ9UIG0 1483 aaKnown RBP25.99■■□□□ 1.75
KRT17-204ENST00000493253 TRIM26Q12899 539 aaPredicted RBP25.98■■□□□ 1.75
KRT17-204ENST00000493253 EHMT2Q96KQ7 1210 aa25.84■■□□□ 1.73
KRT17-204ENST00000493253 EEA1Q15075 1411 aa25.84■■□□□ 1.73
KRT17-204ENST00000493253 WRNQ14191 1432 aaPredicted RBP eCLIP25.79■■□□□ 1.72
KRT17-204ENST00000493253 HMGXB3Q12766 1538 aa25.72■■□□□ 1.71
KRT17-204ENST00000493253 SOGA1O94964 1423 aa25.7■■□□□ 1.71
KRT17-204ENST00000493253 NCAPD3P42695 1498 aa25.67■■□□□ 1.7
KRT17-204ENST00000493253 SYNJ1O43426 1573 aa25.64■■□□□ 1.69
KRT17-204ENST00000493253 CSRNP3Q8WYN3 585 aa25.61■■□□□ 1.69
KRT17-204ENST00000493253 TNIKQ9UKE5 1360 aa25.57■■□□□ 1.68
KRT17-204ENST00000493253 RUSC2Q8N2Y8 1516 aa25.55■■□□□ 1.68
KRT17-204ENST00000493253 GOLGA3Q08378 1498 aa25.53■■□□□ 1.68
KRT17-204ENST00000493253 CEP162Q5TB80 1403 aa25.51■■□□□ 1.67
KRT17-204ENST00000493253 TOP2BQ02880 1626 aa25.47■■□□□ 1.67
KRT17-204ENST00000493253 KIF21BO75037 1637 aa25.45■■□□□ 1.66
KRT17-204ENST00000493253 CEP164Q9UPV0 1460 aa25.44■■□□□ 1.66
KRT17-204ENST00000493253 BIVM-ERCC5R4GMW8 1640 aa25.43■■□□□ 1.66
KRT17-204ENST00000493253 UBTFP17480 764 aaKnown RBP25.4■■□□□ 1.66
KRT17-204ENST00000493253 ZEB1P37275 1124 aaPredicted RBP25.38■■□□□ 1.65
KRT17-204ENST00000493253 CFTRP13569 1480 aa25.33■■□□□ 1.65
KRT17-204ENST00000493253 PPARGC1BQ86YN6 1023 aaKnown RBP25.31■■□□□ 1.64
KRT17-204ENST00000493253 PRDM2Q13029 1718 aa25.26■■□□□ 1.63
KRT17-204ENST00000493253 CUX1P39880 1505 aa25.21■■□□□ 1.63
KRT17-204ENST00000493253 RAPGEF2Q9Y4G8 1499 aa25.15■■□□□ 1.62
KRT17-204ENST00000493253 CLIP1P30622 1438 aa25.14■■□□□ 1.62
KRT17-204ENST00000493253 ERICH3Q5RHP9 1530 aa25.13■■□□□ 1.61
KRT17-204ENST00000493253 CADPSQ9ULU8 1353 aa25.1■■□□□ 1.61
KRT17-204ENST00000493253 KIF27Q86VH2 1401 aa25.08■■□□□ 1.61
KRT17-204ENST00000493253 PRXQ9BXM0 1461 aa25.06■■□□□ 1.6
KRT17-204ENST00000493253 NESP48681 1621 aa25.03■■□□□ 1.6
KRT17-204ENST00000493253 VPS8Q8N3P4 1428 aa25.02■■□□□ 1.6
KRT17-204ENST00000493253 TTBK1Q5TCY1 1321 aaPredicted RBP24.95■■□□□ 1.59
KRT17-204ENST00000493253 ERCC6Q03468 1493 aa24.89■■□□□ 1.57
KRT17-204ENST00000493253 APLP2Q06481 763 aa24.88■■□□□ 1.57
KRT17-204ENST00000493253 CCER1Q8TC90 406 aaPredicted RBP24.87■■□□□ 1.57
KRT17-204ENST00000493253 LAMC3Q9Y6N6 1575 aa24.87■■□□□ 1.57
KRT17-204ENST00000493253 FANCD2Q9BXW9 1451 aa24.85■■□□□ 1.57
KRT17-204ENST00000493253 CUX2O14529 1486 aa24.84■■□□□ 1.57
KRT17-204ENST00000493253 FGD5Q6ZNL6 1462 aa24.84■■□□□ 1.57
KRT17-204ENST00000493253 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.82■■□□□ 1.56
KRT17-204ENST00000493253 RANGAP1P46060 587 aaPredicted RBP24.79■■□□□ 1.56
KRT17-204ENST00000493253 ARAP1Q96P48 1450 aa24.77■■□□□ 1.56
KRT17-204ENST00000493253 DNMBPQ6XZF7 1577 aa24.76■■□□□ 1.55
KRT17-204ENST00000493253 KIF21AQ7Z4S6 1674 aa24.73■■□□□ 1.55
KRT17-204ENST00000493253 IGF1RP08069 1367 aa24.73■■□□□ 1.55
KRT17-204ENST00000493253 PDS5BQ9NTI5 1447 aa24.67■■□□□ 1.54
KRT17-204ENST00000493253 THOC2Q8NI27 1593 aaKnown RBP24.66■■□□□ 1.54
KRT17-204ENST00000493253 TOPBP1Q92547 1522 aa24.66■■□□□ 1.54
KRT17-204ENST00000493253 CARMIL1Q5VZK9 1371 aa24.65■■□□□ 1.54
KRT17-204ENST00000493253 ARHGAP35Q9NRY4 1499 aa24.62■■□□□ 1.53
KRT17-204ENST00000493253 ABCA10Q8WWZ4 1543 aa24.61■■□□□ 1.53
KRT17-204ENST00000493253 POLA1P09884 1462 aaPredicted RBP24.59■■□□□ 1.53
KRT17-204ENST00000493253 RAD54L2Q9Y4B4 1467 aa24.53■■□□□ 1.52
KRT17-204ENST00000493253 CUL7Q14999 1698 aa24.52■■□□□ 1.52
KRT17-204ENST00000493253 HNRNPUL2Q1KMD3 747 aaKnown RBP24.51■■□□□ 1.51
KRT17-204ENST00000493253 URB2Q14146 1524 aaKnown RBP24.47■■□□□ 1.51
KRT17-204ENST00000493253 MRC2Q9UBG0 1479 aa24.46■■□□□ 1.51
KRT17-204ENST00000493253 WDR97A6NE52 1622 aa24.45■■□□□ 1.51
KRT17-204ENST00000493253 MAP3K1Q13233 1512 aa24.43■■□□□ 1.5
KRT17-204ENST00000493253 KANK4Q5T7N3 995 aaPredicted RBP24.42■■□□□ 1.5
KRT17-204ENST00000493253 WDR62O43379 1518 aa24.42■■□□□ 1.5
KRT17-204ENST00000493253 FHAD1B1AJZ9 1412 aa24.38■■□□□ 1.49
KRT17-204ENST00000493253 RRBP1Q9P2E9 1410 aaKnown RBP24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms